| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 3,651,293 | Δ2,422 bp | [yhiS]–yhiS | [yhiS], insH‑11, yhiS | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 3651293 | 3653714 | 2422 | 225 [0] | [0] 224 | [yhiS]–yhiS | [yhiS],insH‑11,yhiS |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 3651292 | 0 (0.000) | 208 (2.010) | 85/94 | 0.0 | 100% | pseudogene (2/746 nt) | yhiS | putative uncharacterized protein YhiS |
| ? | NC_000913 | 3653715 = | 0 (0.000) | intergenic (+2/‑246) | yhiS/slp | putative uncharacterized protein YhiS/starvation lipoprotein | |||||
Only 100 of 228 total aligned reads displayed.
ATCCAATTTAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/3651242‑3651292‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTTTATGTA > NC_000913/3653715‑3653763 ATCCAATTTAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTA > 1:5394191/1‑50 TCCAATTTAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTAT < 1:7978265/50‑1 TCCAATTTAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTAT < 1:1769469/50‑1 TCCAATTTAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTA < 1:357445/49‑1 CCAATTTAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATA > 1:2540754/1‑50 CAATTTAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATAT > 1:1533350/1‑50 CAATTTAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATA < 1:3732453/49‑1 CAATTTAAACATCTTAACATAAAACAAATGATGAATAAGGAATTTTATAT < 1:1849126/50‑1 AATTTAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATT < 1:3383043/50‑1 AATTTAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATT < 1:2787871/50‑1 ATTTAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATT > 1:880697/1‑49 ATTTAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATT > 1:586422/1‑49 TTTAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATTGA > 1:4950306/1‑50 TAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATTGAT > 1:5240151/1‑49 TAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATTGAT > 1:5528301/1‑49 TAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATTGAT < 1:2055254/49‑1 AAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATTGATTA > 1:6610608/1‑50 AAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATTGATT < 1:8191409/49‑1 AACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATTGATTAT < 1:6143690/50‑1 AACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATTGATTAT > 1:7252422/1‑50 AACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATTGATTAT < 1:6735775/50‑1 ACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATTGATTATT < 1:1688114/50‑1 CATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATTGATTAT > 1:3972087/1‑48 ATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATTGATTATTAG > 1:2837913/1‑50 ATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATTGATTATTAG > 1:8289820/1‑50 ATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATTGATTATTAG > 1:6472880/1‑50 ATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATTGATTATTAG < 1:7795741/50‑1 TCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATTGATTATTAG > 1:293680/1‑49 AGCATAAAACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACT < 1:1464642/49‑1 AGCATAAAACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACT < 1:7612035/49‑1 AGCATAAAACAAATGATGAATAAGGAATTTTATATTGATTATTAGCA < 1:4057987/47‑1 AGCATAAAACAAATGATGAATAAGGAATTTTATATTGATTATTAGC < 1:3320507/46‑1 GCATAAAACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTT < 1:7365936/50‑1 GCATAAAACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTT < 1:4176887/50‑1 GCATAAAACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTT < 1:7669373/49‑1 CATAAAACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTA < 1:2321205/50‑1 CATAAAACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTA < 1:7188867/50‑1 TAAAACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATA < 1:4713195/50‑1 TAAAACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTAT > 1:6972093/1‑49 TAAAACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTAT > 1:4187647/1‑49 TAAAACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTAT > 1:418979/1‑49 AAAACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAA > 1:6782700/1‑50 AAAACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAA > 1:8160075/1‑50 AAACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAAT < 1:5013766/50‑1 AAACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAAT < 1:4148720/50‑1 AAACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAAT < 1:3059560/50‑1 AACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAAT > 1:5484187/1‑49 AACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAAT > 1:1003086/1‑49 CAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCAT < 1:6712934/50‑1 CAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCAT > 1:6646754/1‑50 AAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATT > 1:7108628/1‑50 AAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATT > 1:4579355/1‑50 AAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATT < 1:7329820/50‑1 AAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATT > 1:5618630/1‑50 AAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATT > 1:1025831/1‑50 AAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATT > 1:1910202/1‑50 ATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTG > 1:7384081/1‑49 ATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTG > 1:1426392/1‑49 TGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAA < 1:5769538/50‑1 TGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAA < 1:7672912/50‑1 GATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAA > 1:8202087/1‑49 ATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAATA < 1:6215753/50‑1 ATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAATA < 1:6239628/50‑1 ATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAAT < 1:6326947/49‑1 ATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAAT < 1:3130502/49‑1 ATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAAT < 1:5704766/49‑1 TGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAATA > 1:626291/1‑49 TGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAATA > 1:7451748/1‑49 TGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAATA > 1:3833387/1‑49 GAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAATAA > 1:3284537/1‑49 AATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAATAAAA < 1:1086772/50‑1 AATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAATAAA > 1:605035/1‑49 ATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAATAAAAA > 1:4620415/1‑50 ATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAATAAAAA < 1:2516520/50‑1 TAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAATAAAAAT < 1:2644814/50‑1 TAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAATAAAAAT < 1:6909665/50‑1 TAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAATAAAAAT < 1:8311988/50‑1 AAGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAATAAAAA > 1:4908178/1‑48 AGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAATAAAAATA < 1:6171651/49‑1 AGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAATAAAAATA < 1:5971649/49‑1 GGAATTTTATATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGA < 1:5280313/50‑1 GGAATTTTATATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGA < 1:3856908/50‑1 GGAATTTTATATTGATTATTAGCACTTTATAATCATTGAATAAAAA > 1:2746089/1‑46 ATTTTATATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTT < 1:3989562/50‑1 ATTTTATATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTT > 1:5106302/1‑50 ATTTTATATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTT > 1:5832684/1‑50 ATTTTATATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTT > 1:6388944/1‑50 TTTTATATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTTT < 1:3507733/50‑1 TTTTATATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTT > 1:5942479/1‑49 TTTTATATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTT > 1:8210773/1‑49 TTTTATATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTT > 1:803449/1‑49 TTATATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTTTAT > 1:6856816/1‑50 TTATATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTTTAT > 1:7646370/1‑50 ATATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTTTATG > 1:2996815/1‑49 ATATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTTTATG > 1:1449570/1‑49 ATATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTTTATG < 1:7161773/49‑1 ATATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTTTATG < 1:2202523/49‑1 TATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTTTATGTA < 1:5730366/50‑1 TATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTTTATGTA < 1:4447651/50‑1 TATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTTTATGT < 1:1220645/49‑1 ATCCAATTTAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/3651242‑3651292‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTTTATGTA > NC_000913/3653715‑3653763 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |