| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 1,872,030 | Δ1,437 bp | [dgcJ] | [dgcJ] | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 1872030 | 1873466 | 1437 | 164 [0] | [0] 166 | [dgcJ] | [dgcJ] |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 1872029 | 0 (0.000) | 157 (1.480) | 73/96 | 0.0 | 100% | intergenic (+169/‑12) | cdgI/dgcJ | putative c‑di‑GMP binding protein CdgI/putative diguanylate cyclase DgcJ |
| ? | NC_000913 | 1873467 = | 0 (0.000) | coding (1427/1491 nt) | dgcJ | putative diguanylate cyclase DgcJ | |||||
Only 100 of 164 total aligned reads displayed.
AGGCCGCAATCGAACTTTATCTGGTTTTCTCGTTTCACTAACCGAAGGAGTGCCATTTATCATGAAATTGCACCATAGAATGCTCCGGCATTTTATCGC > NC_000913/1871980‑1872078 | aGGCCGCAATCGAACTTTATCTGGTTTTCTCGTTTCACTAACCGAAGGAG < 1:7370154‑M1/50‑1 (MQ=255) ggCCGCAATCGAACTTTATCTGGTTTTCTCGTTTCACTAACCGAAGGAGa < 1:350305‑M1/50‑2 (MQ=255) gCCGCAATCGAACTTTATCTGGTTTTCTCGTTTCACTAACCGAAGGAGat > 1:2024754‑M1/1‑48 (MQ=255) gCCGCAATCGAACTTTATCTGGTTTTCTCGTTTCACTAACCGAAGGAGat < 1:6754186‑M1/50‑3 (MQ=255) gCCGCAATCGAACTTTATCTGGTTTTCTCGTTTCACTAACCGAAGGAGat > 1:1539890‑M1/1‑48 (MQ=255) ccGCAATCGAACTTTATCTGGTTTTCTCGTTTCACTAACCGAAGGAGatg > 1:6236854‑M1/1‑47 (MQ=255) ccGCAATCGAACTTTATCTGGTTTTCTCGTTTCACTAACCGAAGGAGatg < 1:5035669‑M1/50‑4 (MQ=255) ccGCAATCGAACTTTATCTGGTTTTCTCGTTTCACTAACCGAAGGAGatg > 1:18702‑M1/1‑47 (MQ=255) cGCAATCGAACTTTATCTGGTTTTCTCGTTTCACTAACCGAAGGAGatgc < 1:7217452‑M1/50‑5 (MQ=255) cGCAATCGAACTTTATCTGGTTTTCTCGTTTCACTAACCGAAGGAGatgc > 1:7780757‑M1/1‑46 (MQ=255) cGCAATCGAACTTTATCTGGTTTTCTCGTTTCACTAACCGAAGGAGatgc < 1:4519126‑M1/50‑5 (MQ=255) cGCAATCGAACTTTATCTGGTTTTCTCGTTTCACTAACCGAAGGAGatgc < 1:6619100‑M1/50‑5 (MQ=255) cGCAATCGAACTTTATCTGGTTTTCTCGTTTCACTAACCGAAGGAGatgc > 1:1275353‑M1/1‑46 (MQ=255) gCAATCGAACTTTATCTGGTTTTCTCGTTTCACTAACCGAAGGAGatgcg > 1:3378781‑M1/1‑45 (MQ=255) gCAATCGAACTTTATCTGGTTTTCTCGTTTCACTAACCGAAGGAGatgcg < 1:4926382‑M1/50‑6 (MQ=255) cAATCGAACTTTATCTGGTTTTCTCGTTTCACTAACCGAAGGAGatgcgt < 1:4210524‑M1/50‑7 (MQ=255) cAATCGAACTTTATCTGGTTTTCTCGTTTCACTAACCGAAGGAGatgcg > 1:4558200‑M1/1‑44 (MQ=255) cAATCGAACTTTATCTGGTTTTCTCGTTTAACTAACCGAAGGAGatgcgt < 1:1921602‑M1/50‑7 (MQ=255) aTCGAACTTTATCTGGTTTTCTCGTTTCACTAACCGAAGGAGatgcgtat < 1:8100528‑M1/50‑9 (MQ=255) aTCGAACTTTATCTGGTTTTCTCGTTTCACTAACCGAAGGAGatgcgtat < 1:5446545‑M1/50‑9 (MQ=255) aTCGAACTTTATCTGGTTTTCTCGTTTCACTAACCGAAGGAGatgcgtat < 1:4039889‑M1/50‑9 (MQ=255) aTCGAACTTTATCTGGTTTTCTCGTTTCACTAACCGAAGGAGatgcgtat < 1:3660026‑M1/50‑9 (MQ=255) tCGAACTTTATCTGGTTTTCTCGTTTCACTAACCGAAGGAGatgcgtata < 1:1378087‑M1/50‑10 (MQ=255) tCGAACTTTATCTGGTTTTCTCGTTTCACTAACCGAAGGAGatgcgtat > 1:7034701‑M1/1‑41 (MQ=255) cGAACTTTATCTGGTTTTCTCGTTTCACTAACCGAAGGAGatgcgtata > 1:5197308‑M1/1‑40 (MQ=255) cGAACTTTATCTGGTTTTCTCGTTTCACTAACCGAAGGAGatgcgtata > 1:8100731‑M1/1‑40 (MQ=255) gAACTTTATCTGGTTTTCTCGTTTCACTAACCGAAGGAGatgcgtataaa < 1:2794200‑M1/50‑12 (MQ=255) gAACTTTATCTGGTTTTCTCGTTTCACTAACCGAAGGAGatgcgtataaa < 1:6547937‑M1/50‑12 (MQ=255) gAACTTTATCTGGTTTTCTCGTTTCACTAACCGAAGGAGatgcgtataa < 1:1500286‑M1/49‑11 (MQ=255) gAACTTTATCTGGTTTTCTCGTTTCACTAACCGAAGGAGatgcgtataa < 1:1082719‑M1/49‑11 (MQ=255) gAACTTTATCTGGTTTTCTCGTTTCACTAACCGAAGGAGatgcgtata > 1:2881300‑M1/1‑39 (MQ=255) aaCTTTATCTGGTTTTCTCGTTTCACTAACCGAAGGAGatgcgtataaag > 1:3931344‑M1/1‑38 (MQ=255) aaCTTTATCTGGTTTTCTCGTTTCACTAACCGAAGGAGatgcgtataaag < 1:961344‑M1/50‑13 (MQ=255) cTTTATCTGGTTTTCTCGTTTCACTAACCGAAGGAGatgcgtataaagct > 1:548590‑M1/1‑36 (MQ=255) cTTTATCTGGTTTTCTCGTTTCACTAACCGAAGGAGatgcgtataaagct > 1:3447183‑M1/1‑36 (MQ=255) tttATCTGGTTTTCTCGTTTCACTAACCGAAGGAGatgcgtataaagctt > 1:3504537‑M1/1‑35 (MQ=255) ttATCTGGTTTTCTCGTTTCACTAACCGAAGGAGatgcgtataaagcttc > 1:1888098‑M1/1‑34 (MQ=255) ttATCTGGTTTTCTCGTTTCACTAACCGAAGGAGatgcgtataaagcttc > 1:2927550‑M1/1‑34 (MQ=255) tATCTGGTTTTCTCGTTTCACTAACCGAAGGAGatgcgtataaagcttcc > 1:7624937‑M1/1‑33 (MQ=255) aTCTGGTTTTCTCGTTTCACTAACCGAAGGAGatgcgtataaagcttcc < 1:3845462‑M1/49‑18 (MQ=255) aTCTGGTTTTCTCGTTTCACTAACCGAAGGAGatgcgtataaagcttcc < 1:5380377‑M1/49‑18 (MQ=255) aTCTGGTTTTCTCGTTTCACTAACCGAAGGAGatgcgtataaagcttcc < 1:6654740‑M1/49‑18 (MQ=255) cTGGTTTTCTCGTTTCACTAACCGAAGGAGatgcgtataaagcttccgat > 1:1965008‑M1/1‑30 (MQ=255) ggTTTTCTCGTTTCACTAACCGAAGGAGatgcgtataaagcttccgat > 1:1751006‑M1/1‑28 (MQ=255) gTTTTCTCGTTTCACTAACCGAAGGAGatgcgtataaagcttccgatgag > 1:612998‑M1/1‑27 (MQ=255) gTTTTCTCGTTTCACTAACCGAAGGAGatgcgtataaagcttccgatgag < 1:1775628‑M1/50‑24 (MQ=255) gTTTTCTCGTTTCACTAACCGAAGGAGatgcgtataaagcttccgatga < 1:845245‑M1/49‑23 (MQ=255) gTTTTCTCGTTTCACTAACCGAAGGAGatgcgtataaagcttccgatg < 1:5863402‑M1/48‑22 (MQ=255) gTTTTCTCGTTTCACTAACCGAAGGAGatgcgtataaagcttccgat < 1:2307743‑M1/47‑21 (MQ=255) gTTTTCTCGTTTCACTAACCGAAGGAGatgcgtataaagcttccga < 1:8274917‑M1/46‑20 (MQ=255) ttttCTCGTTTCACTAACCGAAGGAGatgcgtataaagcttccgatgagc < 1:6994519‑M1/50‑25 (MQ=255) ttCTCGTTTCACTAACCGAAGGAGatgcgtataaagcttccgatgagcgt > 1:47706‑M1/1‑24 (MQ=255) ttCTCGTTTCACTAACCGAAGGAGatgcgtataaagcttccgatgagcg < 1:1002532‑M1/49‑26 (MQ=255) tctcGTTTCACTAACCGAAGGAGatgcgtataaagcttccgatgagcgtt > 1:6322165‑M1/1‑23 (MQ=255) tctcGTTTCACTAACCGAAGGAGatgcgtataaagcttccgatgagcgt < 1:5388727‑M1/49‑27 (MQ=255) ctcGTTTCACTAACCGAAGGAGatgcgtataaagcttccgatgagcgtt > 1:7683878‑M1/1‑22 (MQ=255) ctcGTTTCACTAACCGAAGGAGatgcgtataaagcttccgatgagcgtt < 1:4137581‑M1/49‑28 (MQ=255) ctcGTTTCACTAACCGAAGGAGatgcgtataaagcttccgatgagcgtt < 1:408287‑M1/49‑28 (MQ=255) ctcGTTTCACTAACCGAAGGAGatgcgtataaagcttccgatgagcgtt < 1:5302644‑M1/49‑28 (MQ=255) tcGTTTCACTAACCGAAGGAGatgcgtataaagcttccgatgagcgttta > 1:1072595‑M1/1‑21 (MQ=255) cGTTTCACTAACCGAAGGAGatgcgtataaagcttccgatgagcgttta > 1:428359‑M1/1‑20 (MQ=255) cGTTTCACTAACCGAAGGAGatgcgtataaagcttccgatgagcgttta > 1:5879236‑M1/1‑20 (MQ=255) gTTTCACTAACCGAAGGAGatgcgtataaagcttccgatgagcgtttat < 1:6356186‑M1/49‑31 (MQ=255) gTTTCACTAACCGAAGGAGatgcgtataaagcttccgatgagcgtttat < 1:1190575‑M1/49‑31 (MQ=255) tttCACTAACCGAAGGAGatgcgtataaagcttccgatgagcgtttatat > 1:2472065‑M1/1‑18 (MQ=255) tttCACTAACCGAAGGAGatgcgtataaagcttccgatgagcgtttatat < 1:3639847‑M1/50‑33 (MQ=255) ttCACTAACCGAAGGAGatgcgtataaagcttccgatgagcgtttatatg > 1:796145‑M1/1‑17 (MQ=255) cACTAACCGAAGGAGatgcgtataaagcttccgatgagcgtttatatgt > 1:4690467‑M1/1‑15 (MQ=255) cACTAACCGAAGGAGatgcgtataaagcttccgatgagcgtttatatgt > 1:2248169‑M1/1‑15 (MQ=255) cACTAACCGAAGGAGatgcgtataaagcttccgatgagcgtttatatgt > 1:3808455‑M1/1‑15 (MQ=255) cACTAACCGAAGGAGatgcgtataaagcttccgatgagcgtttatatgt < 1:4345362‑M1/49‑35 (MQ=255) cTAACCGAAGGAGatgcgtataaagcttccgatgagcgtttatatgtcaa > 1:164088‑M1/1‑13 (MQ=255) cTAACCGAAGGAGatgcgtataaagcttccgatgagcgtttatatgtcaa < 1:3485624‑M1/50‑38 (MQ=255) cTAACCGAAGGAGatgcgtataaagcttccgatgagcgtttatatgtcaa > 1:2783681‑M1/1‑13 (MQ=255) aCCGAAGGAGatgcgtataaagcttccgatgagcgtttatatgtcaataa < 1:3067140‑M1/50‑41 (MQ=255) aCCGAAGGAGatgcgtataaagcttccgatgagcgtttatatgtcaata < 1:5665865‑M1/49‑40 (MQ=255) aCCGAAGGAGatgcgtataaagcttccgatgagcgtttatatgtcaata < 1:6654651‑M1/49‑40 (MQ=255) aCCGAAGGAGatgcgtataaagcttccgatgagcgtttatatgtcaata < 1:247538‑M1/49‑40 (MQ=255) aCCGAAGGAGatgcgtataaagcttccgatgagcgtttatatgtcaata < 1:7103240‑M1/49‑40 (MQ=255) aCCGAAGGAGatgcgtataaagcttccgatgagcgtttatatgtcaat < 1:3769677‑M1/48‑39 (MQ=255) aCCGAAGGAGatgcgtataaagcttccgatgagcgtttatatgtcaat < 1:7752011‑M1/48‑39 (MQ=255) ccGAAGGAGatgcgtataaagcttccgatgagcgtttatatgtcaataag < 1:1477298‑M1/50‑42 (MQ=255) ccGAAGGAGatgcgtataaagcttccgatgagcgtttatatgtcaataag > 1:88936‑M1/1‑9 (MQ=255) ccGAAGGAGatgcgtataaagcttccgatgagcgtttatatgtcaataag > 1:1133471‑M1/1‑9 (MQ=255) ccGAAGGAGatgcgtataaagcttccgatgagcgtttatatgtcaataag > 1:3096885‑M1/1‑9 (MQ=255) ccGAAGGAGatgcgtataaagcttccgatgagcgtttatatgtcaataag < 1:5694906‑M1/50‑42 (MQ=255) cGAAGGAGatgcgtataaagcttccgatgagcgtttatatgtcaataagc < 1:2624963‑M1/50‑43 (MQ=255) cGAAGGAGatgcgtataaagcttccgatgagcgtttatatgtcaataagc < 1:2550780‑M1/50‑43 (MQ=255) gAAGGAGatgcgtataaagcttccgatgagcgtttatatgtcaataag > 1:6736616‑M1/1‑7 (MQ=255) gAAGGAGatgcgtataaagcttccgatgagcgtttatatgtcaataag > 1:6141995‑M1/1‑7 (MQ=255) aaGGAGatgcgtataaagcttccgatgagcgtttatatgtcaataagcag < 1:2657213‑M1/50‑45 (MQ=255) aaGGAGatgcgtataaagcttccgatgagcgtttatatgtcaataagcag < 1:4507483‑M1/50‑45 (MQ=255) aGGAGatgcgtataaagcttccgatgagcgtttatatgtcaataagcaga < 1:7201432‑M1/50‑46 (MQ=255) aGGAGatgcgtataaagcttccgatgagcgtttatatgtcaataagcaga < 1:1946220‑M1/50‑46 (MQ=255) agatgcgtataaagcttccgatgagcgtttatatgtcaataagcagaaca < 1:6772563‑M1/50‑49 (MQ=255) agatgcgtataaagcttccgatgagcgtttatatgtcaataagcagaaca < 1:23939‑M1/50‑49 (MQ=255) agatgcgtataaagcttccgatgagcgtttatatgtcaataagcagaaca < 1:6318412‑M1/50‑49 (MQ=255) agatgcgtataaagcttccgatgagcgtttatatgtcaataagcagaac > 1:5776150‑M1/1‑2 (MQ=255) gatgcgtataaagcttccgatgagcgtttatatgtcaataagcagaacaa < 1:5980030‑M1/50‑50 (MQ=255) gatgcgtataaagcttccgatgagcgtttatatgtcaataagcagaaca > 1:7176827‑M1/1‑1 (MQ=255) | AGGCCGCAATCGAACTTTATCTGGTTTTCTCGTTTCACTAACCGAAGGAGTGCCATTTATCATGAAATTGCACCATAGAATGCTCCGGCATTTTATCGC > NC_000913/1871980‑1872078 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |