Predicted mutation | ||||||
---|---|---|---|---|---|---|
evidence | seq id | position | mutation | annotation | gene | description |
MC JC | NC_000913 | 2,601,201 | Δ13,595 bp | [hyfA]–focB | [hyfA], hyfB, hyfC, hyfD, hyfE, hyfF, hyfG, hyfH, hyfI, hyfJ, hyfR, focB |
Missing coverage evidence... | ||||||||||
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seq id | start | end | size | ←reads | reads→ | gene | description | |||
* | * | ÷ | NC_000913 | 2601201 | 2614795 | 13595 | 124 [0] | [0] 120 | [hyfA]–focB | [hyfA],hyfB,hyfC,hyfD,hyfE,hyfF,hyfG,hyfH,hyfI,hyfJ,hyfR,focB |
New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_000913 | = 2601200 | 0 (0.000) | 119 (1.100) | 66/98 | 0.0 | 100% | intergenic (+252/‑1) | bcp/hyfA | thiol peroxidase/hydrogenase 4 component A |
? | NC_000913 | 2614796 = | 0 (0.000) | intergenic (+14/+24) | focB/yfgO | putative formate transporter/putative transporter YfgO |
Only 100 of 124 total aligned reads displayed.
CTTTATGCAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACATGAACCGCTTTGTGGTGGCCGAACCACTGTGGTGTACAGGATGTAATA > NC_000913/2601151‑2601249 | cTTTATGCAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGAc < 1:5459484/50‑1 (MQ=255) cTTTATGCAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGAc < 1:7199854/50‑1 (MQ=255) cTTTATGCAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGAc > 1:7265696/1‑50 (MQ=255) cTTTATGCAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGAc > 1:1043791/1‑50 (MQ=255) tttATGCAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACc > 1:4575547‑M1/1‑49 (MQ=255) ttATGCAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACc > 1:5241030‑M1/1‑48 (MQ=255) tATGCAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACcg > 1:2135044‑M1/1‑47 (MQ=255) aTGCAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACcga > 1:4734644‑M1/1‑46 (MQ=255) tGCAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACcgaaa < 1:446606‑M1/50‑6 (MQ=255) cAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACcgaaaca < 1:4966470‑M1/50‑8 (MQ=255) cAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACcgaaaca < 1:7837708‑M1/50‑8 (MQ=255) cAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACcgaaaca < 1:1968661‑M1/50‑8 (MQ=255) cAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACcgaaac < 1:2420019‑M1/49‑7 (MQ=255) cAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACcgaaac < 1:7174979‑M1/49‑7 (MQ=255) cAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACcgaaac < 1:569074‑M1/49‑7 (MQ=255) aaTATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACcgaaacag < 1:772668‑M1/50‑9 (MQ=255) aaTATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACcgaaacag < 1:4989773‑M1/50‑9 (MQ=255) atatGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACcgaaacagt > 1:3579033‑M1/1‑41 (MQ=255) atatGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACcgaaacagt < 1:3330988‑M1/50‑10 (MQ=255) atatGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACcgaaacagt < 1:3187534‑M1/50‑10 (MQ=255) atatGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACcgaaacagt > 1:1426674‑M1/1‑41 (MQ=255) tatGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACcgaaacagtt < 1:1868414‑M1/50‑11 (MQ=255) tatGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACcgaaacagtt < 1:7417900‑M1/50‑11 (MQ=255) atGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACcgaaacagttc > 1:5913153‑M1/1‑39 (MQ=255) atGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACcgaaacagttc > 1:7587548‑M1/1‑39 (MQ=255) atGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACcgaaacagttc > 1:3994648‑M1/1‑39 (MQ=255) tGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACcgaaacagttcg > 1:2831563‑M1/1‑38 (MQ=255) tGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACcgaaacagttc < 1:6992792‑M1/49‑12 (MQ=255) tGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACcgaaacagttc < 1:1407826‑M1/49‑12 (MQ=255) tGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACcgaaacagttc < 1:7809795‑M1/49‑12 (MQ=255) tGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACcgaaacagttc < 1:2962372‑M1/49‑12 (MQ=255) gAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACcgaaacagttcgt > 1:2093419‑M1/1‑37 (MQ=255) gAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACcgaaacagttcgt > 1:1054324‑M1/1‑37 (MQ=255) aaaTGCAATGTTTCATATCATTTTCAAGGAGCCGACcgaaacagttcgtc > 1:4023754‑M1/1‑36 (MQ=255) aaaTGCAATGTTTCATATCATTTTCAAGGAGCCGACcgaaacagttcgtc > 1:4451210‑M1/1‑36 (MQ=255) aaaTGCAATGTTTCATATCATTTTCAAGGAGCCGACcgaaacagttcgtc < 1:1741252‑M1/50‑15 (MQ=255) aaaTGCAATGTTTCATATCATTTTCAAGGAGCCGACcgaaacagttcgt < 1:4959728‑M1/49‑14 (MQ=255) aaaTGCAATGTTTCATATCATTTTCAAGGAGCCGACcgaaacagttcgt < 1:2634510‑M1/49‑14 (MQ=255) aaTGCAATGTTTCATATCATTTTCAAGGAGCCGACcgaaacagttcgtcg > 1:4257024‑M1/1‑35 (MQ=255) aTGCAATGTTTCATATCATTTTCAAGGAGCCGACcgaaacagttcgtcgg < 1:5259757‑M1/50‑17 (MQ=255) aTGCAATGTTTCATATCATTTTCAAGGAGCCGACcgaaacagttcgtcgg < 1:8152050‑M1/50‑17 (MQ=255) aTGCAATGTTTCATATCATTTTCAAGGAGCCGACcgaaacagttcgtcgg > 1:1519472‑M1/1‑34 (MQ=255) tGCAATGTTTCATATCATTTTCAAGGAGCCGACcgaaacagttcgtcggg < 1:6459045‑M1/50‑18 (MQ=255) tGCAATGTTTCATATCATTTTCAAGGAGCCGACcgaaacagttcgtcggg < 1:164217‑M1/50‑18 (MQ=255) tGCAATGTTTCATATCATTTTCAAGGAGCCGACcgaaacagttcgtcggg > 1:4300197‑M1/1‑33 (MQ=255) gCAATGTTTCATATCATTTTCAAGGAGCCGACcgaaacagttcgtcgggc > 1:7628606‑M1/1‑32 (MQ=255) cAATGTTTCATATCATTTTCAAGGAGCCGACcgaaacagttcgtcgggct < 1:4930383‑M1/50‑20 (MQ=255) cAATGTTTCATATCATTTTCAAGGAGCCGACcgaaacagttcgtcgggc < 1:8221409‑M1/49‑19 (MQ=255) aaTGTTTCATATCATTTTCAAGGAGCCGACcgaaacagttcgtcgggct > 1:1674296‑M1/1‑30 (MQ=255) aaTGTTTCATATCATTTTCAAGGAGCCGACcgaaacagttcgtcgggct > 1:5888054‑M1/1‑30 (MQ=255) tGTTTCATATCATTTTCAAGGAGCCGACcgaaacagttcgtcgggctgaa < 1:7526256‑M1/50‑23 (MQ=255) tGTTTCATATCATTTTCAAGGAGCCGACcgaaacagttcgtcgggctg > 1:2974942‑M1/1‑28 (MQ=255) tGTTTCATATCATTTTCAAGGAGCCGACcgaaacagttcgtcgggctg > 1:8138135‑M1/1‑28 (MQ=255) tttCATATCATTTTCAAGGAGCCGACcgaaacagttcgtcgggctgaaga < 1:4229067‑M1/50‑25 (MQ=255) tttCATATCATTTTCAAGGAGCCGACcgaaacagttcgtcgggctgaaga < 1:5801979‑M1/50‑25 (MQ=255) tttCATATCATTTTCAAGGAGCCGACcgaaacagttcgtcgggctgaag < 1:2672511‑M1/49‑24 (MQ=255) tttCATATCATTTTCAAGGAGCCGACcgaaacagttcgtcgggctgaag < 1:5714904‑M1/49‑24 (MQ=255) tttCATATCATTTTCAAGGAGCCGACcgaaacagttcgtcgggctg > 1:1804204‑M1/1‑26 (MQ=255) tCATATCATTTTCAAGGAGCCGACcgaaacagttcgtcgggctgaagat > 1:4517867‑M1/1‑24 (MQ=255) tCATATCATTTTCAAGGAGCCGACcgaaacagttcgtcgggctgaagat > 1:5964073‑M1/1‑24 (MQ=255) tCATATCATTTTCAAGGAGCCGACcgaaacagttcgtcgggctgaagat > 1:3495814‑M1/1‑24 (MQ=255) cATATCATTTTCAAGGAGCCGACcgaaacagttcgtcgggctgaagatta > 1:1668398‑M1/1‑23 (MQ=255) atatCATTTTCAAGGAGCCGACcgaaacagttcgtcgggctgaagattat < 1:4612950‑M1/50‑29 (MQ=255) atatCATTTTCAAGGAGCCGACcgaaacagttcgtcgggctgaagattat > 1:4540284‑M1/1‑22 (MQ=255) atatCATTTTCAAGGAGCCGACcgaaacagttcgtcgggctgaagattat > 1:7910665‑M1/1‑22 (MQ=255) atatCATTTTCAAGGAGCCGACcgaaacagttcgtcgggctgaagatta < 1:344998‑M1/49‑28 (MQ=255) atatCATTTTCAAGGAGCCGACcgaaacagttcgtcgggctgaagatta < 1:5584157‑M1/49‑28 (MQ=255) tatCATTTTCAAGGAGCCGACcgaaacagttcgtcgggctgaagattatt > 1:6935301‑M1/1‑21 (MQ=255) tCATTTTCAAGGAGCCGACcgaaacagttcgtcgggctgaagattattc < 1:1152680‑M1/49‑31 (MQ=255) aTTTTCAAGGAGCCGACcgaaacagttcgtcgggctgaagattattcttg < 1:4586269‑M1/50‑34 (MQ=255) aTTTTCAAGGAGCCGACcgaaacagttcgtcgggctgaagattattcttg < 1:6379618‑M1/50‑34 (MQ=255) aTTTTCAAGGAGCCGACcgaaacagttcgtcgggctgaagattattcttg > 1:2669865‑M1/1‑17 (MQ=255) aTTTTCAAGGAGCCGACcgaaacagttcgtcgggctgaagattattctt < 1:3845828‑M1/49‑33 (MQ=255) aTTTTCAAGGAGCCGACcgaaacagttcgtcgggctgaagattattcgt < 1:2659858‑M1/49‑33 (MQ=255) ttttCAAGGAGCGGACcgaaacagttcgtcgggctgaagattattcttgc < 1:6545017‑M1/50‑35 (MQ=255) ttttCAAGGAGCCGACcgaaacagttcgtcgggctgaagattattcttgc > 1:2271170‑M1/1‑16 (MQ=255) ttttCAAGGAGCCGACcgaaacagttcgtcgggctgaagattattcttgc > 1:1960588‑M1/1‑16 (MQ=255) tttCAAGGAGCCGACcgaaacagttcgtcgggctgaagattattcttgcg > 1:2258494‑M1/1‑15 (MQ=255) tCAAGGAGCCGACcgaaacagttcgtcgggctgaagattattcttgcgc < 1:7320463‑M1/49‑37 (MQ=255) cAAGGAGCCGACcgaaacagttcgtcgggctgaagattattcttgcgcga > 1:1147410‑M1/1‑12 (MQ=255) cAAGGAGCCGACcgaaacagttcgtcgggctgaagattattcttgcgcga > 1:229487‑M1/1‑12 (MQ=255) aaGGAGCCGACcgaaacagttcgtcgggctgaagattattcttgcgcgat < 1:8171734‑M1/50‑40 (MQ=255) aGGAGCCGACcgaaacagttcgtcgggctgaagattattcttgcgcgatt > 1:7090692‑M1/1‑10 (MQ=255) aGGAGCCGACcgaaacagttcgtcgggctgaagattattcttgcgcgatt < 1:737039‑M1/50‑41 (MQ=255) aGGAGCCGACcgaaacagttcgtcgggctgaagattattcttgcgcgatt < 1:3830384‑M1/50‑41 (MQ=255) ggAGCCGACcgaaacagttcgtcgggctgaagattattcttgcgcgattt < 1:3299875‑M1/50‑42 (MQ=255) gAGCCGACcgaaacagttcgtcgggctgaagattattcttgcgcgatttg < 1:4517669‑M1/50‑43 (MQ=255) aGCCGACcgaaacagttcgtcgggctgaagattattcttgcgcgatttgc > 1:5151951‑M1/1‑7 (MQ=255) cgaccgaaacagttcgtcgggctgaagattattcttgcgcgatttgccca > 1:7402306‑M1/1‑4 (MQ=255) cgaccgaaacagttcgtcgggctgaagattattcttgcgcgatttgccca > 1:134078‑M1/1‑4 (MQ=255) gaccgaaacagttcgtcgggctgaagattattcttgcgcgatttgcccat < 1:2772320‑M1/50‑48 (MQ=255) gaccgaaacaggtcgtcgggctgaagattattcttgcgcgatttgcccat > 1:2539099‑M1/1‑3 (MQ=255) accgaaacagttcgtcgggctgaagattattcttgcgcgatttgcccatc < 1:322017‑M1/50‑49 (MQ=255) accgaaacagttcgtcgggctgaagattattcttgcgcgatttgcccatc > 1:8241968‑M1/1‑2 (MQ=255) accgaaacagttcgtcgggctgaagattattcttgcgcgatttgcccatc > 1:1167531‑M1/1‑2 (MQ=255) accgaaacagttcgtcgggctgaagattattcttgcgcgatttgcccatc < 1:1654451‑M1/50‑49 (MQ=255) accgaaacagttcgtcgggctgaagattattcttgcgcgatttgcccatc < 1:1785392‑M1/50‑49 (MQ=255) ccgaaacagttcgtcgggctgaagattattcttgcgcgatttgcccatcg < 1:5544931‑M1/50‑50 (MQ=255) ccgaaacagttcgtcgggctgaagattattcttgcgcgatttgcccatcg > 1:4273498‑M1/1‑1 (MQ=255) ccgaaacagttcgtcgggctgaagattattcttgcgcgatttgcccatcg < 1:3529407‑M1/50‑50 (MQ=255) | CTTTATGCAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACATGAACCGCTTTGTGGTGGCCGAACCACTGTGGTGTACAGGATGTAATA > NC_000913/2601151‑2601249 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |