| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 3,090,347 | Δ708 bp | coding (1‑708/708 nt) | endA → | DNA‑specific endonuclease I |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 3090347 | 3091054 | 708 | 96 [0] | [0] 96 | endA | DNA‑specific endonuclease I |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 3090346 | 0 (0.000) | 95 (0.950) | 58/98 | 0.0 | 100% | intergenic (+94/‑1) | yggI/endA | conserved protein YggI/DNA‑specific endonuclease I |
| ? | NC_000913 | 3091055 = | 0 (0.000) | intergenic (+1/‑79) | endA/rsmE | DNA‑specific endonuclease I/16S rRNA m(3)U1498 methyltransferase | |||||
CCAAAACAGCTTTCGCTACGTTGCTGGCTCGTTTTAACACGGAGTAAGTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/3090297‑3090346‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCACGCGTACAAC > NC_000913/3091055‑3091103 CCAAAACAGCTTTCGCTACGTTGCTGGCTCGTTTTAACACGGAG‑AAGTGC < 1:1127388/50‑1CCAAAACAGCTTTCGCTACGTTGCTGGCTCGTTTTAACACGGAG‑AAGTGC > 1:1458233/1‑50 CAAAACAGCTTTCGCTACGTTGCTGGCTCGTTTTAACACGGAG‑AAGTGCC > 1:2727028/1‑50 CAAAACAGCTTTCGCTACGTTGCTGGCTCGTTTTAACACGGAG‑AAGTGCC < 1:1750973/50‑1 AAAACAGCTTTCGCTACGTTGCTGGCTCGTTTTAACACGGAG‑AAGTGCC > 1:108004/1‑49 AAAACAGCTTTCGCTACGTTGCTGGCTCGTTTTAACACGGAG‑AAGTGCC > 1:4399886/1‑49 AAACAGCTTTCACTACGTTGCTGGCTCGTTTTAACACGGAG‑AAGTGCCTA < 1:452889/50‑1 AACAGCTTTCGCTACGTTGCTGGCTCGTTTTAACACGGAG‑AAGTGCCTAC < 1:3664988/50‑1 AACAGCTTTCGCTACGTTGCTGGCTCGTTTTAACACGGAG‑AAGTGCCTAC < 1:3390152/50‑1 AACAGCTTTCGCTACGTTGCTGGCTCGTTTTAACACGGAG‑AAGTGCCTAC < 1:4658811/50‑1 AACAGCTTTCGCTACGTTGCTGGCTCGTTTTAACACGGAG‑AAGTGCCTA > 1:1678129/1‑49 ACAGCTTTCGCTACGTTGCTGGCTCGTTTTAACACGGAG‑AAGTGCCTACA < 1:3364360/50‑1 ACAGCTTTCGCTACGTTGCTGGCTCGTTTTAACACGGAG‑AAGTGCCTACA > 1:266912/1‑50 CAGCTTTCGCTACGTTGCTGGCTCGTTTTAACACGGAG‑AAGTGCCTACAC > 1:2409744/1‑50 CAGCTTTCGCTACGTTGCTGGCTCGTTTTAACACGGAG‑AAGTGCCTACAC > 1:586574/1‑50 AGCTTTCGCTACGTTGCTGGCTCGTTTTAACACGGAG‑AAGTGCCTACAC > 1:1869895/1‑49 AGCTTTCGCTACGTTGCTGGCTCGTTTTAACACGGAG‑AAGTGCCTACAC > 1:2541503/1‑49 GCTTTCGCTACGTTGCTGGCTCGTTTTAACACGGAG‑AAGTGCCTACACTA < 1:2903365/50‑1 CTTTCGCTACGTTGCTGGCTCGTTTTAACACGGAG‑AAGTGCCTACACTAG < 1:4156108/50‑1 TTCGCTACGTTGCTGGCTCGTTTTAACACGGAG‑AAGTGCCTACACTAGCG > 1:5245664/1‑50 TTCGCTACGTTGCTGGCTCGTTTTAACACGGAG‑AAGTGCCTACACTAGCG > 1:4045368/1‑50 TCGCTACGTTGCTGGCTCGTTTTAACACGGAG‑AAGTGCCTACACTAGCG < 1:4017334/49‑1 TCGCTACGTTGCTGGCTCGTTTTAACACGGAG‑AAGTGCCTACACTAGC < 1:4361151/48‑1 CGCTACGTTGCTGGCTCGTTTTAACACGGAG‑AAGTGCCTACTCTAGCGG < 1:6961573/49‑1 CGCTACGTTGCTGGCTCGTTTTAACACGGAG‑AAGTGCCTACACTAGCGG > 1:1973159/1‑49 CGCTACGTTGCTGGCTCGTTTTAACACGGAG‑AAGTGCCTACACTAGCGG > 1:1616809/1‑49 CGCTACGTTGCTGGCTCGTTTTAACACGGAG‑AAGTGCCTACACTAGCGG < 1:3129204/49‑1 CGCTACGTTGCTGGCTCGTTTTAACACGGAG‑AAGTGCCTACACTAGCGG < 1:7584453/49‑1 CGCTACGTTGCTGGCTCGTTTTAACACGGAG‑AAGTGCCTACACTAGCGG > 1:1508282/1‑49 CGCTACGTTGCTGGCTCGTTTTAACACGGAG‑AAGTGCCTACACTAGCGG > 1:3529528/1‑49 GCTACGTTGCTGGCTCGTTTTAACACGGAG‑AAGTGCCTACACTAGCGGGA < 1:3188943/50‑1 GCTACGTTGCTGGCTCGTTTTAACACGGAG‑AAGTGCCTACACTAGCGGGA > 1:1895784/1‑50 GCTACGTTGCTGGCTCGTTTTAACACGGAG‑AAGTGCCTACACTAGCGGGA > 1:2449427/1‑50 GCTACGTTGCTGGCTCGTTTTAACACGGAG‑AAGTGCCTACACTAGCGGGA > 1:2431595/1‑50 GCTACGTTGCTGGCTCGTTTTAACACGGAG‑AAGTGCCCACACTAGCGGGt > 1:6579562/1‑49 CTACGTTGCTGGCTCGTTTTAACACGGAG‑AAGTGCCTACACTAGCGGGAT > 1:5799137/1‑50 CTACGTTGCTGGCTCGTTTTAACACGGAG‑AAGTGCCTACACTAGCGGGAT < 1:35610/50‑1 TACGTTGCTGGCTCGTTTTAACACGGAG‑AAGTGCCTACACTAGCGGGATT > 1:880597/1‑50 ACGTTGCTGGCTCGTTTTAACACGGAG‑AAGTGCCTACACTAGCGGGATTC > 1:4668699/1‑50 CGTTGCTGGCTCGTTTTAACACGGAG‑AAGTGCCTACACTAGCGGGATTCT > 1:6059400/1‑50 CGTTGCTGGCTCGTTTTAACACGGAG‑AAGTGCCTACACTAGCGGGATTC < 1:4443943/49‑1 CGTTGCTGGCTCGTTTTAACACGGAG‑AAGTGCCTACACTAGCGGGATTC < 1:99256/49‑1 CGTTGCTGGCTCGTTTTAACACGGAG‑AAGTGCCTACACTAGCGGGATTC < 1:1758127/49‑1 CGTTGCTGGCTCGTTTTAACACGGAG‑AAGTGCCTACACTAGCGGGATT < 1:5521940/48‑1 CGTTGCTGGCTCGTTTTAACACGGAG‑AAGTGCCTACACTAGCGGGATT < 1:2693422/48‑1 GTTGCTGGCTCGTTTTAACACGGAG‑AAGTGCCTACACTAGCGGGATTCTT > 1:6183876/1‑50 GTTGCTGGCTCGTTTTAACACGGAG‑AAGTGCCTACACTAGCGGGATTCTT > 1:3762801/1‑50 GTTGCTGGCTCGTTTTAACACGGAG‑AAGTGCCTACACTAGCGGGATTCTT > 1:5061401/1‑50 TTGCTGGCTCGTTTTAACACGGAG‑AAGTGCCTACACTAGCGGGATTCTTT < 1:6452521/50‑1 TTGCTGGCTCGTTTTAACACGGAG‑AAGTGCCTACACTAGCGGGATTCTTT < 1:2115862/50‑1 TTGCTGGCTCGTTTTAACACGGAG‑AAGTGCCTACACTAGCGGGATTCTTT < 1:2397470/50‑1 TGCTGGCTCGTTTTAACACGGAG‑AAGTGCCTACACTAGCGGGATTCTTTT > 1:3693447/1‑50 GCTGGCTCGTTTTAACACGGAG‑AAGTGCCTACACTAGCGGGATTCTTTTT > 1:3765121/1‑50 GCTGGCTCGTTTTAACACGGAG‑AAGTGCCTACACTAGCGGGATTCTTTTT > 1:448306/1‑50 CTGGCTCGTTTTAACACGGAG‑AAGTGCCTACACTAGCGGGATTCTTTTTG < 1:2046138/50‑1 CTGGCTCGTTTTAACACGGAG‑AAGTGCCTACACTAGCGGGATTCTTTTTG < 1:5044765/50‑1 CTGGCTCGTTTTAACACGGAG‑AAGTGCCTACACTAGCGGGATTCTTTTT < 1:3539455/49‑1 ttGCTCGTTTTAACACGGAG‑AAGTGCCTACACTAGCGGGATTCTTTTTGT > 1:2722706/3‑50 TGGCTCGTTTTAACACGGAG‑AAGTGCCTACACTAGCGGGATTCTTTTTGT > 1:6920844/1‑50 TGGCTCGTTTTAACACGGAG‑AAGTGCCTACACTAGCGGGATTCTTTTTGT > 1:7574174/1‑50 GCTCGTTTTAACACGGAG‑AAGTGCCTACACTAGCGGGATTCTTTTTGTTA < 1:6289081/50‑1 GCTCGTTTTAACACGGAG‑AAGTGCCTACACTAGCGGGATTCTTTTTGTTA < 1:339104/50‑1 GCTCGTTTTAACACGGAG‑AAGTGCCTACACTAGCGGGATTCTTTTTGTTA < 1:2121567/50‑1 GCTCGTTTTAACACGGAG‑AAGTGCCTACACTAGCGGGATTCTTTTTGTT > 1:2491610/1‑49 GCTCGTTTTAACACGGAG‑AAGTGCCTACACTAGCGGGATTCTTTTTGTT < 1:6040690/49‑1 GCTCGTTTTAACACGGAG‑AAGTGCCTACACTAGCGGGATTCTTTTTGTT > 1:7223118/1‑49 GCTCGTTTTAACACGGAG‑AAGTGCCTACACTAGCGGGATTCTTTTTGTT > 1:2642665/1‑49 GCTCGTTTTAACACGGAG‑AAGTGCCTACACTAGCGGGATTCTTTTTGT < 1:590581/48‑1 CGTTTTAACACGGAG‑AAGTGCCTACACTAGCGGGATTCTTTTTGTTAACC > 1:4970856/1‑50 GTTTTAACACGGAG‑AAGTGCCTACACTAGCGGGATTCTTTTTGTTAACCC > 1:3748638/1‑50 GTTTTAACACGGAG‑AAGTGCCTACACTAGCGGGATTCTTTTTGTTAACCC > 1:6103036/1‑50 GTTTTAACACGGAG‑AAGTGCCTACACTAGCGGGATTCTTTTTGTTAACCC > 1:181194/1‑50 TTTTAACACGGAG‑AAGTGCCTACACTAGCGGGATTCTTTTTGTTAACCCC < 1:4367381/50‑1 TTAACACGGAG‑AAGTGCCTACACTAGCGGGATTCTTTTTGTTAACCCCTA > 1:6011719/1‑50 TTAACACGGAG‑AAGTGCCTACACTAGCGGGATTCTTTTTGTTAACCCCT < 1:5195878/49‑1 TAACACGGAG‑AAGTGCCTACACTAGCGGGATTCTTTTTGTTAACCCCTAC > 1:6556170/1‑50 TAACACGGAG‑AAGTGCCTACACTAGCGGGATTCTTTTTGTTAACCCCTAC > 1:4323959/1‑50 TAACACGGAG‑AAGTGCCTACACTAGCGGGATTCTTTTTGTTAACCCCTA < 1:1550015/49‑1 AACACGGAG‑AAGTGCCTACACTAGCGGGATTCTTTTTGTTAACCCCTACC > 1:1879101/1‑50 AACACGGAG‑AAGTGCCTACACTAGCGGGATTCTTTTTGTTAACCCCTAC < 1:5650662/49‑1 ACACGGAG‑AAGTGCCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCC > 1:5792209/1‑50 CACGGAG‑AAGTGCCTACGCTAGCGGGATTCTTTTTGTTAACCCCTACCCC < 1:577641/50‑1 CACGGAG‑AAGTGCCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCC < 1:107503/50‑1 agAAGTGCCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCACGCG > 1:5136572/3‑50 gAAGTGCCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCACGCGT < 1:117607/49‑1 gAAGTGCCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCACGCG > 1:7402589/2‑49 AAGTGCCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCACGCGTA < 1:3706316/50‑1 AGTGCCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCACGCGTAC < 1:5949024/50‑1 AGTGCCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCACGCGTAC < 1:6891769/50‑1 AGTGCCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCACGCGTA > 1:7599927/1‑49 GTGCCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCACGCGTACA < 1:375172/50‑1 GTGCCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCACGCGTAC > 1:5404504/1‑49 TGCCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCACGCGTACAA < 1:2802137/50‑1 TGCCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCACGCGTACAA > 1:3217841/1‑50 GCCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCACGCGTACAAC > 1:2327497/1‑50 CCAAAACAGCTTTCGCTACGTTGCTGGCTCGTTTTAACACGGAGTAAGTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/3090297‑3090346‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCACGCGTACAAC > NC_000913/3091055‑3091103 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |