| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 3,184,782 | Δ6,916 bp | ubiK–yqiI | ubiK, ygiL, yqiG, insC‑5, insD‑5, yqiG, yqiH, yqiI | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 3184782 | 3191697 | 6916 | 130 [0] | [0] 128 | ubiK–yqiI | ubiK,ygiL,yqiG,insC‑5,insD‑5,yqiG,yqiH,yqiI |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 3184781 | 0 (0.000) | 123 (1.260) | 69/96 | 0.0 | 100% | intergenic (‑315/‑59) | ribB/ubiK | 3,4‑dihydroxy‑2‑butanone‑4‑phosphate synthase/ubiquinone biosynthesis accessory factor UbiK |
| ? | NC_000913 | 3191698 = | 0 (0.000) | intergenic (+2/+41) | yqiI/glgS | putative fimbrial protein YqiI/surface composition regulator | |||||
Only 100 of 130 total aligned reads displayed.
CGCTAATGATTAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/3184732‑3184781‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tATCTAATACAAACACTAAAACGGGCCATCAGGCCCGTTATATCAGTGCT > NC_000913/3191698‑3191746 GCTAATGATTAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATA < 1:3577679/50‑1 CTAATGATTAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATAT < 1:4510555/50‑1 CTAATGATTAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATAT > 1:6851498/1‑50 CTAATGATTAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATAT < 1:6331608/50‑1 CTAATGATTAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATAT > 1:5938836/1‑50 CTAATGATTAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATAT < 1:1608319/50‑1 TAATGATTAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATATC > 1:610843/1‑50 TAATGATTAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATATC > 1:2988162/1‑50 AATGATTAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATATC > 1:5587213/1‑49 ATGATTAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATATCTA < 1:4345304/50‑1 ATGATTAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATATCT > 1:1701296/1‑49 ATGATTAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATATCT > 1:3229890/1‑49 ATGATTAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATATCT < 1:6987101/49‑1 TGATTAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATATCTAA < 1:2664938/50‑1 ATTAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATATCTAATA > 1:6266349/1‑50 ATTAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATATCTAATA < 1:628447/50‑1 ATTAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATATCTAATA > 1:1964520/1‑50 ATTAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATATCTAAT < 1:5317275/49‑1 ATTAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATATCTAAT < 1:113503/49‑1 ATTAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATATCTAAT < 1:1304295/49‑1 TTAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATATCTAATAC < 1:6593383/50‑1 TTAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATATCTAATAC < 1:3872784/50‑1 TAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATATCTAATAC > 1:2718117/1‑49 TAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATATCTAATAC > 1:7029536/1‑49 TAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATATCTAATAC > 1:6403934/1‑49 AGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATATCTAATACA < 1:403207/49‑1 AGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATATCTAATACA > 1:7368126/1‑49 GCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATATCTAATACAAA < 1:1919930/50‑1 GCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATATCTAATACAA < 1:4799847/49‑1 GCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATATCTAATACAA < 1:1213982/49‑1 CGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATATCTAATACAAAC < 1:7300784/50‑1 GGCAGCAACGCATAGCTTCACATAATTCTGGTTTATATCTAATACAAACA > 1:2248926/1‑50 GGCAGCAACGCATAGCTTCACATAATTCTGGTTTATATCTAATACAAACA > 1:7591488/1‑50 GGCAGCAACGCATAGCTTCACATAATTCTGGTTTATATCTAATACAAACA > 1:1981400/1‑50 CAGCAACGCATAGCTTCACATAATTCTGGTTTATATCTAATACAAACACT < 1:6175055/50‑1 CAGCAACGCATAGCTTCACATAATTCTGGTTTATATCTAATACAAACAC > 1:3480578/1‑49 CAGCAACGCATAGCTTCACATAATTCTGGTTTATATCTAATACAAACAC > 1:667382/1‑49 AGCAACGCATAGCTTCACATAATTCTGGTTTATATCTAATACAAACACT > 1:5664313/1‑49 GCAACGCATAGCTTCACATAATTCTGGTTTATATCTAATACAAACACTA > 1:1992585/1‑49 CAACGCATAGCTTCACATAATTCTGGTTTATATCTAATACAAACACTAAA < 1:7163699/50‑1 AACGCATAGCTTCACATAATTCTGGTTTATATCTAATACAAACACTAAAA < 1:697766/50‑1 GCATAGCTTCACATAATTCTGGTTTATATCTAATACAAACACTAAAACGG < 1:216269/50‑1 GCATAGCTTCACATAATTCTGGTTTATATCTAATACAAACACTAAAACGG < 1:5859300/50‑1 CATAGCTTCACATAATTCTGGTTTATATCTAATACAAACACTAAAACGGG > 1:239336/1‑50 CATAGCTTCACATAATTCTGGTTTATATCTAATACAAACACTAAAACGGG < 1:1956158/50‑1 ATAGCTTCACATAATTCTGGTTTATATCTAATACAAACACTAAAACGGGC > 1:1679173/1‑50 ATAGCTTCACATAATTCTGGTTTATATCTAATACAAACACTAAAACGGGC > 1:2240323/1‑50 TAGCTTCACATAATTCTGGTTTATATCTAATACAAACACTAAAACGGGCC < 1:5630000/50‑1 TAGCTTCACATAATTCTGGTTTATATCTAATACAAACACTAAAACGGGC > 1:515882/1‑49 TAGCTTCACATAATTCTGGTTTATATCTAATACAAACACTAAAACGGGC > 1:5050340/1‑49 AGCTTCACATAATTCTGGTTTATATCTAATACAAACACTAAAACGGGCCA > 1:3515404/1‑50 GCTTCACATAATTCTGGTTTATATCTAATACAAACACTAAAACGGGCCAT < 1:941506/50‑1 CTTCACATAATTCTGGTTTATATCTAATACAAACACTAAAACGGGCCATC < 1:304037/50‑1 CTTCACATAATTCTGGTTTATATCTAATACAAACACTAAAACGGGCCATC < 1:5568763/50‑1 TTCACATAATTCTGGTTTATATCTAATACAAACACTAAAACGGGCCAT > 1:5322958/1‑48 TCACATAATTCTGGTTTATATCTAATACAAACACTAAAACGGGCCATCAG > 1:4790074/1‑50 TCACATAATTCTGGTTTATATCTAATACAAACACTAAAACGGGCCATCAG > 1:5649778/1‑50 CACATAATTCTGGTTTATATCTAATACAAACACTAAAACGGGCCATCAGG > 1:2837338/1‑50 CACATAATTCTGGTTTATATCTAATACAAACACTAAAACGGGCCATCAGG > 1:6402187/1‑50 CACATAATTCTGGTTTATATCTAATACAAACACTAAAACGGGCCATCAG < 1:6856497/49‑1 CACATAATTCTGGTTTATATCTAATACAAACACTAAAACGGGCCATCAG < 1:175643/49‑1 CACATAATTCTGGTTTATATCTAATACAAACACTAAAACGGGCCATCA < 1:3233245/48‑1 CACATAATTCTGGTTTATATCTAATACAAACACTAAAACGGGCCATCA < 1:6097439/48‑1 CACATAATTCTGGTTTATATCTAATACAAACACTAAAACGGGCCATCA < 1:824500/48‑1 ACATAATTCTGGTTTATATCTAATACAAACACTAAAACGGGCCATCAGGC < 1:6582475/50‑1 ACATAATTCTGGTTTATATCTAATACAAACACTAAAACGGGCCATCAGG < 1:2527466/49‑1 CATAATTCTGGTTTATATCTAATACAAACACTAAAACGGGCCATCAGGCC > 1:5234912/1‑50 CATAATTCTGGTTTATATCTAATACAAACACTAAAACGGGCCATCAGGCC > 1:360592/1‑50 CATAATTCTGGTTTATATCTAATACAAACACTAAAACGGGCCATCAGGCC < 1:4394204/50‑1 ATAATTCTGGTTTATATCTAATACAAACACTAAAACGGGCCATCAGGCCC > 1:3794424/1‑50 ATAATTCTGGTTTATATCTAATACAAACACTAAAACGGGCCATCAGGCCC > 1:4083874/1‑50 TAATTCTGGTTTATATCTAATACAAACACTAAAACGGGCCATCAGGCCCG < 1:367838/50‑1 TAATTCTGGTTTATATCTAATACAAACACTAAAACGGGCCATCAGGCCCG > 1:2969391/1‑50 ATTCTGGTTTATATCTAATACAAACACTAAAACGGGCCATCAGGCCCGTT < 1:5514399/50‑1 ATTCTGGTTTATATCTAATACAAACACTAAAACGGGCCATCAGGCCCGTT < 1:3226579/50‑1 ATTCTGGTTTATATCTAATACAAACACTAAAACGGGCCATCAGGCCCGT > 1:3784947/1‑49 ATTCTGGTTTATATCTAATACAAACACTAAAACGGGCCATCAGGCCCGT > 1:3738895/1‑49 ATTCTGGTTTATATCTAATACAAACACTAAAACGGGCCATCAGGCCCGT > 1:6755609/1‑49 ATTCTGGTTTATATCTAATACAAACACTAAAACGGGCCATCAGGCCCGT > 1:2019563/1‑49 ATTCTGGTTTATATCTAATACAAACACTAAAACGGGCCATCAGGCCCGT > 1:4326306/1‑49 TTCTGGTTTATATCTAATACAAACACTAAAACGGGCCATCAGGCCCGTTA > 1:3517364/1‑50 TCTGGTTTATATCTAATACAAACACTAAAACGGGCCATCAGGCCCGTTA > 1:5890698/1‑49 TCTGGTTTATATCTAATACAAACACTAAAACGGGCCATCAGGCCCGTTA > 1:2798001/1‑49 TGGTTTATATCTAATACAAACACTAAAACGGGCCATCAGGCCCGTTATAT > 1:6278954/1‑50 TGGTTTATATCTAATACAAACACTAAAACGGGCCATCAGGCCCGTTATAT > 1:1620455/1‑50 GGTTTATATCTAATACAAACACTAAAACGGGCCATCAGGCCCGTTATAT > 1:19546/1‑49 GGTTTATATCTAATACAAACACTAAAACGGGCCATCAGGCCCGTTATAT > 1:4480799/1‑49 GGTTTATATCTAATACAAACACTAAAACGGGCCATCAGGCCCGTTATAT > 1:551372/1‑49 GTTTATATCTAATACAAACACTAAAACGGGCCATCAGGCCCGTTATATC < 1:315693/49‑1 GTTTATATCTAATACAAACACTAAAACGGGCCATCAGGCCCGTTATAT < 1:2620994/48‑1 GTTTATATCTAATACAAACACTAAAACGCGCCATCAGGCCCGTTATAT > 1:101286/1‑48 TTTATATCTAATACAAACACTAAAACGGGCCATCAGGCCCGTTATATCAG > 1:6605640/1‑50 TTTATATCTAATACAAACACTAAAACGGGCCATCAGGCCCGTTATATCAG > 1:7001292/1‑50 TTTATATCTAATACAAACACTAAAACGGGCCATCAGGCCCGTTATATCAG > 1:7447762/1‑50 TATATCTAATACAAACACTAAAACGGGCCATCAGGCCCGTTATATCAGTG > 1:6151001/1‑50 TATATCTAATACAAACACTAAAACGGGCCATCAGGCCCGTTATATCAGTG > 1:4251096/1‑50 ATATCTAATACAAACACTAAAACGGGCCATCAGGCCCGTTATATCAGTG < 1:1593375/49‑1 TATCTAATACAAACACTAAAACGGGCCATCAGGCCCGTTATATCAGTGCT < 1:7167518/50‑1 TATCTAATACAAACACTAAAACGGGCCATCAGGCCCGTTATATCAGTGCT > 1:7328334/1‑50 TATCTAATACAAACACTAAAACGGGCCATCAGGCCCGTTATATCAGTGCT > 1:4923296/1‑50 CGCTAATGATTAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/3184732‑3184781‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tATCTAATACAAACACTAAAACGGGCCATCAGGCCCGTTATATCAGTGCT > NC_000913/3191698‑3191746 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |