| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 3,184,782 | Δ6,916 bp | ubiK–yqiI | ubiK, ygiL, yqiG, insC‑5, insD‑5, yqiG, yqiH, yqiI | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 3184782 | 3191697 | 6916 | 130 [0] | [0] 128 | ubiK–yqiI | ubiK,ygiL,yqiG,insC‑5,insD‑5,yqiG,yqiH,yqiI |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 3184781 | 0 (0.000) | 123 (1.260) | 69/96 | 0.0 | 100% | intergenic (‑315/‑59) | ribB/ubiK | 3,4‑dihydroxy‑2‑butanone‑4‑phosphate synthase/ubiquinone biosynthesis accessory factor UbiK |
| ? | NC_000913 | 3191698 = | 0 (0.000) | intergenic (+2/+41) | yqiI/glgS | putative fimbrial protein YqiI/surface composition regulator | |||||
Only 100 of 130 total aligned reads displayed.
CGCTAATGATTAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATGACTTACCCTTATCGCACTACAATGGCACTCAACACCTATCAGTACAGG > NC_000913/3184732‑3184830 | gCTAATGATTAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATa < 1:3577679‑M1/50‑2 (MQ=255) cTAATGATTAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATat < 1:4510555‑M1/50‑3 (MQ=255) cTAATGATTAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATat > 1:6851498‑M1/1‑48 (MQ=255) cTAATGATTAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATat < 1:6331608‑M1/50‑3 (MQ=255) cTAATGATTAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATat > 1:5938836‑M1/1‑48 (MQ=255) cTAATGATTAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATat < 1:1608319‑M1/50‑3 (MQ=255) tAATGATTAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATatc > 1:610843‑M1/1‑47 (MQ=255) tAATGATTAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATatc > 1:2988162‑M1/1‑47 (MQ=255) aaTGATTAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATatc > 1:5587213‑M1/1‑46 (MQ=255) aTGATTAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATatcta < 1:4345304‑M1/50‑6 (MQ=255) aTGATTAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATatct > 1:1701296‑M1/1‑45 (MQ=255) aTGATTAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATatct > 1:3229890‑M1/1‑45 (MQ=255) aTGATTAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATatct < 1:6987101‑M1/49‑5 (MQ=255) tGATTAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATatctaa < 1:2664938‑M1/50‑7 (MQ=255) aTTAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATatctaata > 1:6266349‑M1/1‑42 (MQ=255) aTTAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATatctaata < 1:628447‑M1/50‑9 (MQ=255) aTTAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATatctaata > 1:1964520‑M1/1‑42 (MQ=255) aTTAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATatctaat < 1:5317275‑M1/49‑8 (MQ=255) aTTAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATatctaat < 1:113503‑M1/49‑8 (MQ=255) aTTAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATatctaat < 1:1304295‑M1/49‑8 (MQ=255) ttAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATatctaatac < 1:6593383‑M1/50‑10 (MQ=255) ttAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATatctaatac < 1:3872784‑M1/50‑10 (MQ=255) tAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATatctaatac > 1:2718117‑M1/1‑40 (MQ=255) tAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATatctaatac > 1:7029536‑M1/1‑40 (MQ=255) tAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATatctaatac > 1:6403934‑M1/1‑40 (MQ=255) aGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATatctaataca < 1:403207‑M1/49‑11 (MQ=255) aGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATatctaataca > 1:7368126‑M1/1‑39 (MQ=255) gCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATatctaatacaaa < 1:1919930‑M1/50‑13 (MQ=255) gCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATatctaatacaa < 1:4799847‑M1/49‑12 (MQ=255) gCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATatctaatacaa < 1:1213982‑M1/49‑12 (MQ=255) cGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATatctaatacaaac < 1:7300784‑M1/50‑14 (MQ=255) ggCAGCAACGCATAGCTTCACATAATTCTGGTTTATatctaatacaaaca > 1:2248926‑M1/1‑36 (MQ=255) ggCAGCAACGCATAGCTTCACATAATTCTGGTTTATatctaatacaaaca > 1:7591488‑M1/1‑36 (MQ=255) ggCAGCAACGCATAGCTTCACATAATTCTGGTTTATatctaatacaaaca > 1:1981400‑M1/1‑36 (MQ=255) cagcaACGCATAGCTTCACATAATTCTGGTTTATatctaatacaaacact < 1:6175055‑M1/50‑17 (MQ=255) cagcaACGCATAGCTTCACATAATTCTGGTTTATatctaatacaaacac > 1:3480578‑M1/1‑34 (MQ=255) cagcaACGCATAGCTTCACATAATTCTGGTTTATatctaatacaaacac > 1:667382‑M1/1‑34 (MQ=255) agcaACGCATAGCTTCACATAATTCTGGTTTATatctaatacaaacact > 1:5664313‑M1/1‑33 (MQ=255) gcaACGCATAGCTTCACATAATTCTGGTTTATatctaatacaaacacta > 1:1992585‑M1/1‑32 (MQ=255) caACGCATAGCTTCACATAATTCTGGTTTATatctaatacaaacactaaa < 1:7163699‑M1/50‑20 (MQ=255) aaCGCATAGCTTCACATAATTCTGGTTTATatctaatacaaacactaaaa < 1:697766‑M1/50‑21 (MQ=255) gCATAGCTTCACATAATTCTGGTTTATatctaatacaaacactaaaacgg < 1:216269‑M1/50‑24 (MQ=255) gCATAGCTTCACATAATTCTGGTTTATatctaatacaaacactaaaacgg < 1:5859300‑M1/50‑24 (MQ=255) cATAGCTTCACATAATTCTGGTTTATatctaatacaaacactaaaacggg > 1:239336‑M1/1‑26 (MQ=255) cATAGCTTCACATAATTCTGGTTTATatctaatacaaacactaaaacggg < 1:1956158‑M1/50‑25 (MQ=255) aTAGCTTCACATAATTCTGGTTTATatctaatacaaacactaaaacgggc > 1:1679173‑M1/1‑25 (MQ=255) aTAGCTTCACATAATTCTGGTTTATatctaatacaaacactaaaacgggc > 1:2240323‑M1/1‑25 (MQ=255) tAGCTTCACATAATTCTGGTTTATatctaatacaaacactaaaacgggcc < 1:5630000‑M1/50‑27 (MQ=255) tAGCTTCACATAATTCTGGTTTATatctaatacaaacactaaaacgggc > 1:515882‑M1/1‑24 (MQ=255) tAGCTTCACATAATTCTGGTTTATatctaatacaaacactaaaacgggc > 1:5050340‑M1/1‑24 (MQ=255) aGCTTCACATAATTCTGGTTTATatctaatacaaacactaaaacgggcca > 1:3515404‑M1/1‑23 (MQ=255) gCTTCACATAATTCTGGTTTATatctaatacaaacactaaaacgggccat < 1:941506‑M1/50‑29 (MQ=255) cTTCACATAATTCTGGTTTATatctaatacaaacactaaaacgggccatc < 1:304037‑M1/50‑30 (MQ=255) cTTCACATAATTCTGGTTTATatctaatacaaacactaaaacgggccatc < 1:5568763‑M1/50‑30 (MQ=255) ttCACATAATTCTGGTTTATatctaatacaaacactaaaacgggccat > 1:5322958‑M1/1‑20 (MQ=255) tCACATAATTCTGGTTTATatctaatacaaacactaaaacgggccatcag > 1:4790074‑M1/1‑19 (MQ=255) tCACATAATTCTGGTTTATatctaatacaaacactaaaacgggccatcag > 1:5649778‑M1/1‑19 (MQ=255) cacaTAATTCTGGTTTATatctaatacaaacactaaaacgggccatcagg > 1:2837338‑M1/1‑18 (MQ=255) cacaTAATTCTGGTTTATatctaatacaaacactaaaacgggccatcagg > 1:6402187‑M1/1‑18 (MQ=255) cacaTAATTCTGGTTTATatctaatacaaacactaaaacgggccatcag < 1:6856497‑M1/49‑32 (MQ=255) cacaTAATTCTGGTTTATatctaatacaaacactaaaacgggccatcag < 1:175643‑M1/49‑32 (MQ=255) cacaTAATTCTGGTTTATatctaatacaaacactaaaacgggccatca < 1:3233245‑M1/48‑31 (MQ=255) cacaTAATTCTGGTTTATatctaatacaaacactaaaacgggccatca < 1:6097439‑M1/48‑31 (MQ=255) cacaTAATTCTGGTTTATatctaatacaaacactaaaacgggccatca < 1:824500‑M1/48‑31 (MQ=255) acaTAATTCTGGTTTATatctaatacaaacactaaaacgggccatcaggc < 1:6582475‑M1/50‑34 (MQ=255) acaTAATTCTGGTTTATatctaatacaaacactaaaacgggccatcagg < 1:2527466‑M1/49‑33 (MQ=255) caTAATTCTGGTTTATatctaatacaaacactaaaacgggccatcaggcc > 1:5234912‑M1/1‑16 (MQ=255) caTAATTCTGGTTTATatctaatacaaacactaaaacgggccatcaggcc > 1:360592‑M1/1‑16 (MQ=255) caTAATTCTGGTTTATatctaatacaaacactaaaacgggccatcaggcc < 1:4394204‑M1/50‑35 (MQ=255) aTAATTCTGGTTTATatctaatacaaacactaaaacgggccatcaggccc > 1:3794424‑M1/1‑15 (MQ=255) aTAATTCTGGTTTATatctaatacaaacactaaaacgggccatcaggccc > 1:4083874‑M1/1‑15 (MQ=255) tAATTCTGGTTTATatctaatacaaacactaaaacgggccatcaggcccg < 1:367838‑M1/50‑37 (MQ=255) tAATTCTGGTTTATatctaatacaaacactaaaacgggccatcaggcccg > 1:2969391‑M1/1‑14 (MQ=255) aTTCTGGTTTATatctaatacaaacactaaaacgggccatcaggcccgtt < 1:5514399‑M1/50‑39 (MQ=255) aTTCTGGTTTATatctaatacaaacactaaaacgggccatcaggcccgtt < 1:3226579‑M1/50‑39 (MQ=255) aTTCTGGTTTATatctaatacaaacactaaaacgggccatcaggcccgt > 1:3784947‑M1/1‑12 (MQ=255) aTTCTGGTTTATatctaatacaaacactaaaacgggccatcaggcccgt > 1:3738895‑M1/1‑12 (MQ=255) aTTCTGGTTTATatctaatacaaacactaaaacgggccatcaggcccgt > 1:6755609‑M1/1‑12 (MQ=255) aTTCTGGTTTATatctaatacaaacactaaaacgggccatcaggcccgt > 1:2019563‑M1/1‑12 (MQ=255) aTTCTGGTTTATatctaatacaaacactaaaacgggccatcaggcccgt > 1:4326306‑M1/1‑12 (MQ=255) ttCTGGTTTATatctaatacaaacactaaaacgggccatcaggcccgtta > 1:3517364‑M1/1‑11 (MQ=255) tCTGGTTTATatctaatacaaacactaaaacgggccatcaggcccgtta > 1:5890698‑M1/1‑10 (MQ=255) tCTGGTTTATatctaatacaaacactaaaacgggccatcaggcccgtta > 1:2798001‑M1/1‑10 (MQ=255) tGGTTTATatctaatacaaacactaaaacgggccatcaggcccgttatat > 1:6278954‑M1/1‑8 (MQ=255) tGGTTTATatctaatacaaacactaaaacgggccatcaggcccgttatat > 1:1620455‑M1/1‑8 (MQ=255) ggTTTATatctaatacaaacactaaaacgggccatcaggcccgttatat > 1:19546‑M1/1‑7 (MQ=255) ggTTTATatctaatacaaacactaaaacgggccatcaggcccgttatat > 1:4480799‑M1/1‑7 (MQ=255) ggTTTATatctaatacaaacactaaaacgggccatcaggcccgttatat > 1:551372‑M1/1‑7 (MQ=255) gTTTATatctaatacaaacactaaaacgggccatcaggcccgttatatc < 1:315693‑M1/49‑44 (MQ=255) gTTTATatctaatacaaacactaaaacgggccatcaggcccgttatat < 1:2620994‑M1/48‑43 (MQ=255) gTTTATatctaatacaaacactaaaacgcgccatcaggcccgttatat > 1:101286‑M1/1‑6 (MQ=255) tttATatctaatacaaacactaaaacgggccatcaggcccgttatatcag > 1:6605640‑M1/1‑5 (MQ=255) tttATatctaatacaaacactaaaacgggccatcaggcccgttatatcag > 1:7001292‑M1/1‑5 (MQ=255) tttATatctaatacaaacactaaaacgggccatcaggcccgttatatcag > 1:7447762‑M1/1‑5 (MQ=255) tatatctaatacaaacactaaaacgggccatcaggcccgttatatcagtg > 1:6151001‑M1/1‑3 (MQ=255) tatatctaatacaaacactaaaacgggccatcaggcccgttatatcagtg > 1:4251096‑M1/1‑3 (MQ=255) atatctaatacaaacactaaaacgggccatcaggcccgttatatcagtg < 1:1593375‑M1/49‑48 (MQ=255) tatctaatacaaacactaaaacgggccatcaggcccgttatatcagtgct < 1:7167518‑M1/50‑50 (MQ=255) tatctaatacaaacactaaaacgggccatcaggcccgttatatcagtgct > 1:7328334‑M1/1‑1 (MQ=255) tatctaatacaaacactaaaacgggccatcaggcccgttatatcagtgct > 1:4923296‑M1/1‑1 (MQ=255) | CGCTAATGATTAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATGACTTACCCTTATCGCACTACAATGGCACTCAACACCTATCAGTACAGG > NC_000913/3184732‑3184830 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |