| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 380111 | 0 (0.000) | 77 (0.880) +CGAGAT |
43/86 | 0.1 | 68.2% | coding (732/774 nt) | yaiO | outer membrane protein YaiO |
| ? | NC_000913 | 4070444 = | 82 (0.820) | intergenic (‑43/+71) | yihR/yihS | putative aldose 1‑epimerase YihR/sulfoquinovose isomerase | |||||
Only 100 of 162 total aligned reads displayed.
ACGACATACAGCCTCCCGTGAGGCTGATGTCAAACCCAAAAACTGCACCGGACGGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGAGAGGGGAAAACC > NC_000913/4070395‑4070493 | tcagaatttccaggtcagacgggctgcaagttgcagaccgttacgagatg > 1:110900‑M2/50‑50 (MQ=255)tcagaatttccaggtcagacgggctgcaagttgcagaccgttacgagatg < 1:1914568‑M2/1‑1 (MQ=255) cagaatttccaggtcagacgggctgcaagttgcagaccgttacgagatg > 1:4551013‑M2/49‑49 (MQ=255) cagaatttccaggtcagacgggctgcaagttgcagaccgttacgagatg > 1:4687211‑M2/49‑49 (MQ=255) cGACATACAGCCTCCCGTGAGGCTGATGTCAAACCCAAAAACTGCACCgg < 1:2038659/50‑1 (MQ=255) cGACATACAGCCTCCCGTGAGGCTGATGTCAAACCCAAAAACTGCACCgg < 1:5773761/50‑1 (MQ=255) gACATACAGCCTCCCGTGAGGCTGATGTCAAACCCAAAAACTGCACCGGa < 1:4665619/50‑1 (MQ=255) gACATACAGCCTCCCGTGAGGCTGATGTCAAACCCAAAAACTGCACCGGa < 1:235487/50‑1 (MQ=255) gACATACAGCCTCCCGTGAGGCTGATGTCAAACCCAAAAACTGCACCGGa < 1:6615116/50‑1 (MQ=255) agaatttccaggtcagacgggctgcaagttgcagaccgttacgagatgg < 1:2895905‑M2/2‑1 (MQ=255) agaatttccaggtcagacgggctgcaagttgcagaccgttacgagatGGa < 1:102759‑M2/3‑1 (MQ=255) agaatttccaggtcagacgggctgcaagttgcagaccgttacgagatGGa > 1:1223570‑M2/48‑50 (MQ=255) gaatttccaggtcagacgggctgcaagttgcagaccgttacgagatGGAc < 1:5532915‑M2/4‑1 (MQ=255) aatttccaggtcagacgggctgcaagttgcagaccgttacgagatGGACg > 1:3625403‑M2/46‑50 (MQ=255) aatttccaggtcagacgggctgcaagttgcagaccgttacgagatGGACg < 1:5392359‑M2/5‑1 (MQ=255) aatttccaggtcagacgggctgcaagttgcagaccgttacgagatGGACg > 1:3460033‑M2/46‑50 (MQ=255) ttccaggtcagacgggctgcaagttgcagaccgttacgagatGGACGGTc > 1:5056188‑M2/43‑50 (MQ=255) caggtcagacgggctgcaagttgcagaccgttacgagatGGACGGTcccc > 1:1370044‑M2/40‑50 (MQ=255) ccTCCCGTGAGGCTGATGTCAAACCCAAAAACTGCACCGGACGGTCCCCt > 1:2895552/1‑50 (MQ=255) ccTCCCGTGAGGCTGATGTCAAACCCAAAAACTGCACCGGACGGTCCCCt > 1:2556578/1‑50 (MQ=255) aggtcagacgggctgcaagttgcagaccgttacgagatGGACGGTCCCCt > 1:1650427‑M2/39‑50 (MQ=255) aggtcagacgggctgcaagttgcagaccgttacgagatGGACGGTCCCCt < 1:4194430‑M2/12‑1 (MQ=255) ggtcagacgggctgcaagttgcagaccgttacgagatGGACGGTCCCCTc < 1:3833507‑M2/13‑1 (MQ=255) ggtcagacgggctgcaagttgcagaccgttacgagatGGACGGTCCCCTc < 1:2447382‑M2/13‑1 (MQ=255) ggtcagacgggctgcaagttgcagaccgttacgagatGGACGGTCCCCTc < 1:2652081‑M2/13‑1 (MQ=255) ggtcagacgggctgcaagttgcagaccgttacgagatGGACGGTCCCCTc < 1:2369438‑M2/13‑1 (MQ=255) gtcagacgggctgcaagttgcagaccgttacgagatGGACGGTCCCCTCg > 1:6230339‑M2/37‑50 (MQ=255) gtcagacgggctgcaagttgcagaccgttacgagatGGACGGTCCCCTCg > 1:6739057‑M2/37‑50 (MQ=255) tcagacgggctgcaagttgcagaccgttacgagatGGACGGTCCCCTCGc < 1:3777318‑M2/15‑1 (MQ=255) cccGTGAGGCTGATGTCAAACCCAAAAACTGCACCGGACGGTCCCCTCGc > 1:2777870/1‑50 (MQ=255) cagacgggctgcaagttgcagaccgttacgagatGGACGGTCCCCTCGcc > 1:323764‑M2/35‑50 (MQ=255) cGTGAGGCTGATGTCAAACCCAAAAACTGCACCGGACGGTCCCCTCGccc < 1:3109536/50‑1 (MQ=255) cGTGAGGCTGATGTCAAACCCAAAAACTGCACCGGACGGTCCCCTCGccc < 1:3519262/50‑1 (MQ=255) cGTGAGGCTGATGTCAAACCCAAAAACTGCACCGGACGGTCCCCTCGccc < 1:3797912/50‑1 (MQ=255) agacgggctgcaagttgcagaccgttacgagatGGACGGTCCCCTCGccc > 1:6805056‑M2/34‑50 (MQ=255) agacgggctgcaagttgcagaccgttacgagatGGACGGTCCCCTCGccc > 1:5455839‑M2/34‑50 (MQ=255) gacgggctgcaagttgcagaccgttacgagatGGACGGTCCCCTCGcccc < 1:2090875‑M2/18‑1 (MQ=255) gTGAGGCTGATGTCAAACCCAAAAACTGCACCGGACGGTCCCCTCGcccc < 1:2318795/50‑1 (MQ=255) gTGAGGCTGATGTCAAACCCAAAAACTGCACCGGACGGTCCCCTCGcccc > 1:3917004/1‑50 (MQ=255) gTGAGGCTGATGTCAAACCCAAAAACTGCACCGGACGGTCCCCTCGcccc > 1:2016853/1‑50 (MQ=255) gTGAGGCTGATGTCAAACCCAAAAACTGCACCGGACGGTCCCCTCAcccc > 1:1138867/1‑50 (MQ=255) tGAGGCTGATGTCAAACCCAAAAACTGCACCGGACGGTCCCCTCGCCCCt < 1:152665/50‑1 (MQ=255) acgggctgcaagttgcagaccgttacgagatGGACGGTCCCCTCgccccc < 1:5876606‑M2/19‑2 (MQ=255) gAGGCTGATGTCAAACCCAAAAACTGCACCGGACGGTCCCCTCGCCCCtt > 1:2514848/1‑50 (MQ=255) gggctgcaagttgcagaccgttacgagatGGACGGTCCCCTCGCCCCctt < 1:6225129‑M2/21‑1 (MQ=255) gggctgcaagttgcagaccgttacgagatGGACGGTCCCCTCGCCCCctt > 1:3190413‑M2/30‑50 (MQ=255) aGGCTGATGTCAAACCCAAAAACTGCACCGGACGGTCCCCTCGCCCCttt < 1:6265407/50‑1 (MQ=255) aGGCTGATGTCAAACCCAAAAACTGCACCGGACGGTCCCCTCGCCCCttt < 1:5195109/50‑1 (MQ=255) gctgcaagttgcagaccgttacgagatGGACGGTCCCCTCGCCCCCTTgg < 1:7612336‑M2/23‑1 (MQ=255) gCTGATGTCAAACCCAAAAACTGCACCGGACGGTCCCCTCGCCCCTTTgg < 1:5744565/50‑1 (MQ=255) gCTGATGTCAAACCCAAAAACTGCACCGGACGGTCCCCTCGCCCCTTTgg > 1:86634/1‑50 (MQ=255) ctgcaagttgcagaccgttacgagatGGACGGTCCCCTCGCCCCCTTggg < 1:1519757‑M2/24‑1 (MQ=255) tgcaagttgcagaccgttacgagatGGACGGTCCCCTCGCCCCCTTggg > 1:762487‑M2/26‑49 (MQ=255) tGATGTCAAACCCAAAAACTGCACCGGACGGTCCCCTCGCCCCTTTggg > 1:1756697/1‑49 (MQ=255) tGATGTCAAACCCAAAAACTGCACCGGACGGTCCCCTCGCCCCTTTggg > 1:639813/1‑49 (MQ=255) gcaagttgcagaccgttacgagatGGACGGTCCCCTCGCCCCCTTggg > 1:1901685‑M2/25‑48 (MQ=255) gATGTCAAACCCAAAAACTGCACCGGACGGTCCCCTCGCCCCTTTggg > 1:1714920/1‑48 (MQ=255) caagttgcagaccgttacgagatGGACGGTCCCCTCGCCCCCTTggg > 1:7385983‑M2/24‑47 (MQ=255) caagttgcagaccgttacgagatGGACGGTCCCCTCGCCCCCTTGGGga < 1:3086181‑M2/26‑1 (MQ=255) aTGTCAAACCCAAAAACTGCACCGGACGGTCCCCTCGCCCCTTTggg > 1:7020470/1‑47 (MQ=255) aTGTCAAACCCAAAAACTGCACCGGACGGTCCCCTCGCCCCTTTggg > 1:2936404/1‑47 (MQ=255) aTGTCAAACCCAAAAACTGCACCGGACGGTCCCCTCGCCCCTTTGGGgag < 1:389609/50‑1 (MQ=255) tGTCAAACCCAAAAACTGCACCGGACGGTCCCCTCGCCCCTTTGGGga > 1:451638/1‑48 (MQ=255) aagttgcagaccgttacgagatGGACGGTCCCCTCGCCCCCTTGGGgaga < 1:1016092‑M2/28‑1 (MQ=255) aagttgcagaccgttacgagatGGACGGTCCCCTCGCCCCCTTGGGgaga < 1:907247‑M2/28‑1 (MQ=255) gTCAAACCCAAAAACTGCACCGGACGGTCCCCTCGCCCCTTTGGGGagag > 1:1390500/1‑50 (MQ=255) agttgcagaccgttacgagatGGACGGTCCCCTCGCCCCCTTGGGGagag < 1:7078101‑M2/29‑1 (MQ=255) agttgcagaccgttacgagatGGACGGTCCCCTCGCCCCCTTGGGGagag < 1:2640378‑M2/29‑1 (MQ=255) tCAAACCCAAAAACTGCACCGGACGGTCCCCTCGCCCCTTTGGGGagag < 1:6175722/49‑1 (MQ=255) tCAAACCCAAAAACTGCACCGGACGGTCCCCTCGCCCCTTTGGGGAGAgg < 1:1306527/50‑1 (MQ=255) gttgcagaccgttacgagatGGACGGTCCCCTCGCCCCCTTGGGGAGAgg > 1:6901779‑M2/21‑50 (MQ=255) ttgcagaccgttacgagatGGACGGTCCCCTCGCCCCCTTGGGGAGAggg > 1:5169010‑M2/20‑50 (MQ=255) aaaCCCAAAAACTGCACCGGACGGTCCCCTCGCCCCTTTGGGGAGAGGGt < 1:4767850/50‑1 (MQ=255) gcagaccgttacgagatGGACGGTCCCCTCGCCCCCTTGGGGAGAGGGt < 1:6171412‑M2/32‑1 (MQ=255) aaCCCAAAAACTGCACCGGACGGTCCCCTCGCCCCTTTGGGGAGAGGGtt < 1:1590222/50‑1 (MQ=255) cagaccgttacgagatGGACGGTCCCCTCGCCCCCTTGGGGAGAGGGTTa < 1:7472615‑M2/34‑1 (MQ=255) cccAAAAACTGCACCGGACGGTCCCCTCGCCCCTTTGGGGAGAGGGTTAg > 1:6009620/1‑50 (MQ=255) cccAAAAACTGCACCGGACGGTCCCCTCGCCCCTTTGGGGAGAGGGTTAg < 1:4911885/50‑1 (MQ=255) agaccgttacgagatGGACGGTCCCCTCGCCCCCTTGGGGAGAGGGTTAg < 1:5586832‑M2/35‑1 (MQ=255) agaccgttacgagatGGACGGTCCCCTCGCCCCCTTGGGGAGAGGGTTAg < 1:3741230‑M2/35‑1 (MQ=255) gaccgttacgagatGGACGGTCCCCTCGCCCCCTTGGGGAGAGGGTTAgg < 1:5415156‑M2/36‑1 (MQ=255) gaccgttacgagatGGACGGTCCCCTCGCCCCCTTGGGGAGAGGGTTAgg > 1:7499150‑M2/15‑50 (MQ=255) gaccgttacgagatGGACGGTCCCCTCGCCCCCTTGGGGAGAGGGTTAgg > 1:3061571‑M2/15‑50 (MQ=255) cAAAAACTGCACCGGACGGTCCCCTCGCCCCTTTGGGGAGAGGGTTAggg < 1:591945/50‑1 (MQ=255) cAAAAACTGCACCGGACGGTCCCCTCGCCCCTTTGGGGAGAGGGTTAggg < 1:1292729/50‑1 (MQ=255) cAAAAACTGCACCGGACGGTCCCCTCGCCCCTTTGGGGAGAGGGTTAggg < 1:4633086/50‑1 (MQ=255) accgttacgagatGGACGGTCCCCTCGCCCCCTTGGGGAGAGGGTTAggg < 1:1408363‑M2/37‑1 (MQ=255) aaaaaCTGCACCGGACGGTCCCCTCGCCCCTTTGGGGAGAGGGTTAgg > 1:1602730/1‑48 (MQ=255) aaaaCTGCACCGGACGGTCCCCTCGCCCCTTTGGGGAGAGGGTTAgg > 1:5488429/1‑47 (MQ=255) aaaaCTGCACCGGACGGTCCCCTCGCCCCTTTGGGGAGAGGGTTAgg > 1:3233402/1‑47 (MQ=255) aaaaCTGCACCGGACGGTCCCCTCGCCCCTTTGGGGAGAGGGTTAgg > 1:3453033/1‑47 (MQ=255) aaaaCTGCACCGGACGGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGgag < 1:2928412/50‑1 (MQ=255) aaaaCTGCACCGGACGGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGgag < 1:7180331/50‑1 (MQ=255) aaaCTGCACCGGACGGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGgaga < 1:1380213/50‑1 (MQ=255) aaaCTGCACCGGACGGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGga > 1:1676904/1‑48 (MQ=255) aaCTGCACCGGACGGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGagag > 1:7127984/1‑50 (MQ=255) aCTGCACCGGACGGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGAGAgg < 1:743/50‑1 (MQ=255) tGCACCGGACGGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGAGAggg > 1:698494/1‑49 (MQ=255) aCCGGACGGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGAGAGGGGaaa < 1:2250268/50‑1 (MQ=255) ggACGGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGAGAGGGGAAAAcc > 1:6499891/1‑50 (MQ=255) | ACGACATACAGCCTCCCGTGAGGCTGATGTCAAACCCAAAAACTGCACCGGACGGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGAGAGGGGAAAACC > NC_000913/4070395‑4070493 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |