| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 380111 | 0 (0.000) | 42 (0.540) +CGAGAT |
28/86 | 0.9 | 60.8% | coding (732/774 nt) | yaiO | outer membrane protein YaiO |
| ? | NC_000913 | 4070444 = | 62 (0.700) | intergenic (‑43/+71) | yihR/yihS | putative aldose 1‑epimerase YihR/sulfoquinovose isomerase | |||||
GAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/380066‑380111‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GGACGGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGG > NC_000913/4070444‑4070480 |||||| GAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTACGAG < 1:358511/50‑1GAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTAC > 1:2207321/1‑47 AATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTACGAGA < 1:6043258/50‑1 AATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTAC > 1:2214405/1‑46 ATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTACGAGAT < 1:5024977/50‑1 AGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTACGAGATGGA < 1:1266971/50‑1 AGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTACGAGATGG < 1:5112150/49‑1 AGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTACGAGATGG < 1:3590025/49‑1 ATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTACGAGATGGACGG > 1:6380618/1‑50 TTTCCAGGTCAGACGGGCTGCAAGTTGCAGCCCGTTACGAGATGGACGGT > 1:3826483/1‑50 TTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTACGAGATGGACGGT < 1:1979390/50‑1 TCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTACGAGATGGACGGTC < 1:1093888/49‑1 TCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTACGAGATGGACGGTC < 1:2513981/49‑1 CCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTACGAGATGGACGGTCC < 1:4308974/49‑1 CCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTACGAGATGGACGGTCC < 1:3771797/49‑1 CAGGTCAGACGGGCTGCAAGTTGCAGACCGTTACGAGATGGACGGTCCCC < 1:4325121/50‑1 CAGGTCAGACGGGCTGCAAGTTGCAGACCGTTACGAGATGGACGGTCCCC < 1:381948/50‑1 AGGTCAGACGGGCTGCAAGTTGCAGACCGTTACGAGATGGACGGTCCCCT > 1:2497159/1‑50 AGGTCAGACGGGCTGCAAGTTGCAGACCGTTACGAGATGGACGGTCCCCT < 1:2492481/50‑1 AGGTCAGACGGGCTGCAAGTTGCAGACCGTTACGAGATGGACGGTCCCCT > 1:4730446/1‑50 GGTCAGACGGGCTGCAAGTTGCAGACCGTTACGAGATGGACGGTCCCCTC < 1:1336313/50‑1 TCAGACGGGCTGCAAGTTGCAGACCGTTACGAGATGGACGGTCCCCTCGC > 1:5615000/1‑50 CAGACGGGCTGCAAGTTGCAGACCGTTACGAGATGGACGGTCCCCTCGCC > 1:3300477/1‑50 AGACGGGCTGCAAGTTGCAGACCGTTACGCGCTGGACGGTCCCCTCGCCC > 1:6318880/1‑50 AGACGGGCTGCAAGTTGCAGACCGTTACGAGATGGACGGTCCCCTCGCCC > 1:4184341/1‑50 AGACGGGCTGCAAGTTGCAGACCGTTACGAGATGGACGGTCCCCTCGCCC > 1:2344429/1‑50 GACGGGCTGCAAGTTGCAGACCGTTACGAGATGTACGGTCCCCTCGCCCC > 1:5674970/1‑50 GACGGGCTGCAAGTTGCAGACCGTTACGAGATGGACGGTCCCCTCGCCCC > 1:2650843/1‑50 ACGGGCTGCAAGTTGCAGACCGTTACGAGATGGACGGTCCCCTCGCCCCc > 1:3653509/1‑49 ACGGGCTGCAAGTTGCAGACCGTTACGAGATGGACGGTCCCCTCGCCCCc > 1:2776085/1‑49 ACGGGCTGCAAGTTGCAGACAGTTACGAGATGGACGGTCCCCTCGCCCCc < 1:164577/50‑2 CGGGCTGCAAGTTGCAGACCGTTACGAGATGGACGGTCCCCTCGCCCCct > 1:5062140/1‑48 GGCTGCAAGTTGCAGACCGTTACGAGATGGACGGTCCCCTCGCCCCCTTG > 1:1319998/1‑50 GCTGCAAGTTGCAGACCGTTACGAGATGGACGGTCCCCTCGCCCCCTTGG > 1:3514537/1‑50 CAAGTTGCAGACCGTTACGAGATGGACGGTCCCCTCGCCCCCTTGGG > 1:3445342/1‑47 CAAGTTGCAGACCGTTACGAGATGGACGGTCCCCTCGCCCCCTTGGG > 1:258996/1‑47 AAGTTGCAGACCGTTACGAGATGGACGGTCCCCTCGCCCCCTTGGGGA > 1:3711977/1‑48 AGTTGCAGACCGTTACGAGATGGACGGTCCCCTCGCCCCCTTGGGGAGAG > 1:1957106/1‑50 GTTGCAGACCGTTACGAGATGGACGGTCCCCTCGCCCCCTTGGGGAGAGG > 1:6473029/1‑50 TTGCAGACCGTTACGAGATGGACGGTCCCCTCGCCCCCTTGGGGAGAGGG < 1:1193157/50‑1 TGCAGACCGTTACGAGATGGACGGTCCCCTCGCCCCCTTGGGGAGAGGGT > 1:2736283/1‑50 CAGACCGTTACGAGATGGACGGTCCCCTCGCCCCCTTGGGGAGAGGGTT < 1:6581203/49‑1 AGACCGTTACGAGATGGACGGTCCCCTCGCCCCCTTGGGGAGAGGGTTAG < 1:265911/50‑1 GACCGTTACGAGATGGACGGTCCCCTCGCCCCCTTGGGGAGAGGGTTAGG < 1:6096446/50‑1 ACCGTTACGAGATGGACGGTCCCCTCGCCCCCTTGGGGAGAGGGTTAGGG < 1:4497640/50‑1 ACCGTTACGAGATGGACGGTCCCCTCGCCCCCTTGGGGAGAGGGTTAGGG > 1:4328052/1‑50 ACCGTTACGAGATGGACGGTCCCCTCGCCCCCTTGGGGAGAGGGTTAGGG < 1:3650776/50‑1 |||||| GAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/380066‑380111‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GGACGGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGG > NC_000913/4070444‑4070480 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |