| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 380111 | 0 (0.000) | 42 (0.540) +CGAGAT |
28/86 | 0.9 | 60.8% | coding (732/774 nt) | yaiO | outer membrane protein YaiO |
| ? | NC_000913 | 4070444 = | 62 (0.700) | intergenic (‑43/+71) | yihR/yihS | putative aldose 1‑epimerase YihR/sulfoquinovose isomerase | |||||
Only 100 of 106 total aligned reads displayed.
ACGACATACAGCCTCCCGTGAGGCTGATGTCAAACCCAAAAACTGCACCGGACGGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGAGAGGGGAAAACC > NC_000913/4070395‑4070493 | aCGACATACAGCCTCCCGTGAGGCTGATGTCAAACCCAAAAACTGCACCg > 1:3023581/1‑50 (MQ=255)aCGACATACAGCCTCCCGTGAGGCTGATGTCAAACCCAAAAACTGCACCg < 1:6166470/50‑1 (MQ=255) cGACATACAGCCTCCCGTGAGGCTGATGTCAAACCCAAAAACTGCACCg > 1:5785974/1‑49 (MQ=255) gACATACAGCCTCCCGTGAGGCTGATGTCACACCCAAAAACTGCACCGGa > 1:4163420/1‑50 (MQ=255) agaatttccaggtcagacgggctgcaagttgcagaccgttacgagatgg < 1:3590025‑M2/2‑1 (MQ=255) agaatttccaggtcagacgggctgcaagttgcagaccgttacgagatgg < 1:5112150‑M2/2‑1 (MQ=255) agaatttccaggtcagacgggctgcaagttgcagaccgttacgagatGGa < 1:1266971‑M2/3‑1 (MQ=255) aCATACAGCCTCCCGTGAGGCTGATGTCAAACCCAAAAACTGCACCGGAc < 1:1608018/50‑1 (MQ=255) cATACAGCCTCCCGTGAGGCTGATGTCAAACCCAAAAACTGCACCGGACg > 1:6738108/1‑50 (MQ=255) atttccaggtcagacgggctgcaagttgcagaccgttacgagatGGACgg > 1:6380618‑M2/45‑50 (MQ=255) aTACAGCCTCCCGTGAGGCTGATGTCAAACCCAAAAACTGCACCGGACgg > 1:3988492/1‑50 (MQ=255) aTACAGCCTCCCGTGAGGCTGATGTCAAACCCAAAAACTGCACCGGACgg < 1:4751052/50‑1 (MQ=255) tttccaggtcagacgggctgcaagttgcagcccgttacgagatGGACGGt > 1:3826483‑M2/44‑50 (MQ=255) tttccaggtcagacgggctgcaagttgcagaccgttacgagatGGACGGt < 1:1979390‑M2/7‑1 (MQ=255) tACAGCCTCCCGTGAGGCTGATGTCAAACCCAAAAACTGCACCGGACGGt < 1:2889755/50‑1 (MQ=255) tACAGCCTCCCGTGAGGCTGATGTCAAACCCAAAAACTGCACCGGACGGt < 1:6016815/50‑1 (MQ=255) aCAGCCTCCCGTGAGGCTGATGTCAAACCCAAAAACTGCACCGGACGGTc > 1:438607/1‑50 (MQ=255) tccaggtcagacgggctgcaagttgcagaccgttacgagatGGACGGTc < 1:1093888‑M2/8‑1 (MQ=255) tccaggtcagacgggctgcaagttgcagaccgttacgagatGGACGGTc < 1:2513981‑M2/8‑1 (MQ=255) cAGCCTCCCGTGAGGCTGATGTCAAACCCAAAAACTGCACCGGACGGTcc > 1:3819688/1‑50 (MQ=255) cAGCCTCCCGTGAGGCTGATGTCAAACCCAAAAACTGCACCGGACGGTc < 1:2084690/49‑1 (MQ=255) ccaggtcagacgggctgcaagttgcagaccgttacgagatGGACGGTcc < 1:4308974‑M2/9‑1 (MQ=255) caggtcagacgggctgcaagttgcagaccgttacgagatGGACGGTcccc < 1:381948‑M2/11‑1 (MQ=255) caggtcagacgggctgcaagttgcagaccgttacgagatGGACGGTcccc < 1:4325121‑M2/11‑1 (MQ=255) ccTCCCGTGAGGCTGATGTCAAACCCAAAAACTGCGCCGGACGGTCCCCt < 1:4886258/50‑1 (MQ=255) ccTCCCGTGAGGCTGATGTCAAACCCAAAAACTGCACAGGACGGTCCCCt < 1:4338731/50‑1 (MQ=255) aggtcagacgggctgcaagttgcagaccgttacgagatGGACGGTCCCCt < 1:2492481‑M2/12‑1 (MQ=255) aggtcagacgggctgcaagttgcagaccgttacgagatGGACGGTCCCCt > 1:4730446‑M2/39‑50 (MQ=255) aggtcagacgggctgcaagttgcagaccgttacgagatGGACGGTCCCCt > 1:2497159‑M2/39‑50 (MQ=255) ggtcagacgggctgcaagttgcagaccgttacgagatGGACGGTCCCCTc < 1:1336313‑M2/13‑1 (MQ=255) cTCCCGTGAGGCTGATGTCAAACCCAAAAACTGCACCGGACGGTCCCCTc < 1:2205282/50‑1 (MQ=255) cTCCCGTGAGGCTGATGTCAAACCCAAAAACTGCACCGGACGGTCCCCTc > 1:6196051/1‑50 (MQ=255) cTCCCGTGAGGCTGATGTCAAACCCAAAAACTGCACCGGACGGTCCCCTc < 1:1924710/50‑1 (MQ=255) cTCCCGTGAGGCTGATGTCAAACCCAAAAACTGCACCGGACGGTCCCCTc < 1:4700729/50‑1 (MQ=255) tcagacgggctgcaagttgcagaccgttacgagatGGACGGTCCCCTCGc > 1:5615000‑M2/36‑50 (MQ=255) ccGTGAGGCTGATGTCAAACCCAAAAACTGCACCGGACGGTCCCCTCGcc > 1:3923427/1‑50 (MQ=255) ccGTGAGGCTGATGTCAAACCCAAAAACTGCACCGGACGGTCCCCTCGcc > 1:61902/1‑50 (MQ=255) ccGTGAGGCTGATGTCAAACCCAAAAACTGCACCGGACGGTCCCCTCGcc < 1:3779455/50‑1 (MQ=255) cagacgggctgcaagttgcagaccgttacgagatGGACGGTCCCCTCGcc > 1:3300477‑M2/35‑50 (MQ=255) cGTGAGGCTGATGTCAAACCCAAAAACTGCACCGGACGGTCCTCTCGccc > 1:5826636/1‑50 (MQ=255) cGTGAGGCTGATGTCAAACCCAAAAACTGCACCGGACGGTCCCCTCGccc > 1:5554032/1‑50 (MQ=255) cGTGAGGCTGATGTCAAACCCAAAAACTGCACCGGACGGTCCCCTCGccc < 1:2291036/50‑1 (MQ=255) agacgggctgcaagttgcagaccgttacgcgctGGACGGTCCCCTCGccc > 1:6318880‑M2/34‑50 (MQ=255) agacgggctgcaagttgcagaccgttacgagatGGACGGTCCCCTCGccc > 1:4184341‑M2/34‑50 (MQ=255) agacgggctgcaagttgcagaccgttacgagatGGACGGTCCCCTCGccc > 1:2344429‑M2/34‑50 (MQ=255) gacgggctgcaagttgcagaccgttacgagatGTACGGTCCCCTCGcccc > 1:5674970‑M2/33‑50 (MQ=255) gacgggctgcaagttgcagaccgttacgagatGGACGGTCCCCTCGcccc > 1:2650843‑M2/33‑50 (MQ=255) gTGAGGCTGATGTCAAACCCAAAAACTGCACCGGACGGTCCCCTCGcccc > 1:6461401/1‑50 (MQ=255) tGAGGCTGATGTCAAACCCAAAAACTGCACCGGACGGTCCCCTCGCCCCt > 1:3486421/1‑50 (MQ=255) tGAGGCTGATGTCAAACCCAAAAACTGCACCGGACGGTCCCCTCGCCCCt < 1:3485448/50‑1 (MQ=255) acgggctgcaagttgcagaccgttacgagatGGACGGTCCCCTCgccccc > 1:3653509‑M2/32‑49 (MQ=255) acgggctgcaagttgcagaccgttacgagatGGACGGTCCCCTCgccccc > 1:2776085‑M2/32‑49 (MQ=255) acgggctgcaagttgcagacagttacgagatGGACGGTCCCCTCgccccc < 1:164577‑M2/19‑2 (MQ=255) cgggctgcaagttgcagaccgttacgagatGGACGGTCCCCTcgccccct > 1:5062140‑M2/31‑48 (MQ=255) aGGCTGATGTCAAACCCAAAAACTGCACCGGACGGTCCCCTCGCCCCttt < 1:497065/50‑1 (MQ=255) aGGCTGATGTCAAACCCAAAAACTGCACCGGACGGTCCCCTCGCCCCttt > 1:2450375/1‑50 (MQ=255) aGGCTGATGTCAAACCCAAAAACTGCACCGGACGGTCCCCTCGCCCCtt < 1:4985142/49‑1 (MQ=255) aGGCTGATGTCAAACCCAAAAACTGCACCGGACGGTCCCCTCGCCCCtt < 1:1119647/49‑1 (MQ=255) ggctgcaagttgcagaccgttacgagatGGACGGTCCCCTCGCCCCCTTg > 1:1319998‑M2/29‑50 (MQ=255) ggCTGATGTCAAACCCAAAAACTGCACCGGACGGTCCCCTCGCCCCTTTg < 1:5278314/50‑1 (MQ=255) gctgcaagttgcagaccgttacgagatGGACGGTCCCCTCGCCCCCTTgg > 1:3514537‑M2/28‑50 (MQ=255) gCTGATGTCAAACCCAAAAACTGCACCGGACGGTCCCCTCGCCCCtttag > 1:83249/1‑48 (MQ=255) gCTGATGTCAAACCCAAAAACTGCACCGGACGGTCCCCTCGCCCCTTTgg < 1:2035663/50‑1 (MQ=255) gCTGATGTCAAACCCAAAAACTGCACCGGACGGTCCCCTCGCCCCTTTgg < 1:3687370/50‑1 (MQ=255) tGATGTCAAACCCAAAAACTGCACCGGACGGTCCCCTCGCCCCTTTggg > 1:1557791/1‑49 (MQ=255) tGATGTCAAACCCAAAAACTGCACCGGACGGTCCCCTCGCCCCTTTggg > 1:3919760/1‑49 (MQ=255) caagttgcagaccgttacgagatGGACGGTCCCCTCGCCCCCTTggg > 1:258996‑M2/24‑47 (MQ=255) caagttgcagaccgttacgagatGGACGGTCCCCTCGCCCCCTTggg > 1:3445342‑M2/24‑47 (MQ=255) tGTCAAACCCAAAAACTGCACCGGACGGTCCCCTCGCCCCTTTGGGgaga < 1:2416291/50‑1 (MQ=255) aagttgcagaccgttacgagatGGACGGTCCCCTCGCCCCCTTGGGga > 1:3711977‑M2/23‑48 (MQ=255) agttgcagaccgttacgagatGGACGGTCCCCTCGCCCCCTTGGGGagag > 1:1957106‑M2/22‑50 (MQ=255) gttgcagaccgttacgagatGGACGGTCCCCTCGCCCCCTTGGGGAGAgg > 1:6473029‑M2/21‑50 (MQ=255) ttgcagaccgttacgagatGGACGGTCCCCTCGCCCCCTTGGGGAGAggg < 1:1193157‑M2/31‑1 (MQ=255) tgcagaccgttacgagatGGACGGTCCCCTCGCCCCCTTGGGGAGAGGGt > 1:2736283‑M2/19‑50 (MQ=255) aaaCCCAAAAACTGCACCGGACGGTCCCCTCGCCCCTTTGGGGAGAggg < 1:2767262/49‑1 (MQ=255) aaaCCCAAAAACTGCACCGGACGGTCCCCTCGCCCCTTTGGGGAGAGGGt > 1:3775917/1‑50 (MQ=255) cagaccgttacgagatGGACGGTCCCCTCGCCCCCTTGGGGAGAGGGtt < 1:6581203‑M2/33‑1 (MQ=255) aCCCAAAAACTGCACCGGACGGTCCCCTCGCCCCTTTGGGGAGAGGGTTa < 1:5222571/50‑1 (MQ=255) cccAAAAACTGCACCGGACGGTCCCCTCGCCCCTTTGGGGAGAGGGTTAg < 1:4288368/50‑1 (MQ=255) agaccgttacgagatGGACGGTCCCCTCGCCCCCTTGGGGAGAGGGTTAg < 1:265911‑M2/35‑1 (MQ=255) gaccgttacgagatGGACGGTCCCCTCGCCCCCTTGGGGAGAGGGTTAgg < 1:6096446‑M2/36‑1 (MQ=255) ccAAAAACTGCACCGGACGGTCCCCTCGCCCCTTTGGGGAGAGGGTTAgg > 1:4325891/1‑50 (MQ=255) cAAAAACTGCACCGGACGGTCCCCTCGCCCCTTTGGGGAGAGGGTTAggg < 1:5098670/50‑1 (MQ=255) cAAAAACTGCACCGGACGGTCCCCTCGCCCCTTTGGGGAGAGGGTTAggg < 1:2116434/50‑1 (MQ=255) cAAAAACTGCACCGGACGGTCCCCTCGCCCCTTTGGGGAGAGGGTTAggg < 1:2507810/50‑1 (MQ=255) accgttacgagatGGACGGTCCCCTCGCCCCCTTGGGGAGAGGGTTAggg < 1:3650776‑M2/37‑1 (MQ=255) accgttacgagatGGACGGTCCCCTCGCCCCCTTGGGGAGAGGGTTAggg < 1:4497640‑M2/37‑1 (MQ=255) accgttacgagatGGACGGTCCCCTCGCCCCCTTGGGGAGAGGGTTAggg > 1:4328052‑M2/14‑50 (MQ=255) aaaaCTGCACCGGACGGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGgag < 1:3100375/50‑1 (MQ=255) aaaaCTGCACAGGACGGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGgag < 1:4978853/50‑1 (MQ=255) aaaCTGCACCGGACGGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGgaga < 1:4647474/50‑1 (MQ=255) aaaCTGCACCGGACGGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGgaga < 1:1733066/50‑1 (MQ=255) aCTGCACCGGACGGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGAGAgg < 1:2470685/50‑1 (MQ=255) aCTGCACCGGACGGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGAGAgg > 1:3218284/1‑50 (MQ=255) cTGCACCGGACGGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGAGAggg > 1:3625391/1‑50 (MQ=255) cTGCACCGGACGGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGAGAggg > 1:3975081/1‑50 (MQ=255) cACCGGACGGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGAGAGGGGa > 1:3248125/1‑49 (MQ=255) ccGGACGGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGAGAGGGGaaaa > 1:4148579/1‑50 (MQ=255) ggACGGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGAGAGGGGAAAAcc > 1:3503128/1‑50 (MQ=255) ggACGGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGAGAGGGGAAAAcc > 1:1867221/1‑50 (MQ=255) | ACGACATACAGCCTCCCGTGAGGCTGATGTCAAACCCAAAAACTGCACCGGACGGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGAGAGGGGAAAACC > NC_000913/4070395‑4070493 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |