| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 2,204,350 | Δ32,368 bp | yehL–preA | 30 genes yehL, yehM, yehP, yehQ, yehR, yehS, btsR, btsS, mlrA, yohO, yehW, yehX, yehY, osmF, bglX, dld, pbpG, yohC, yohD, yohF, mdtQ, yohP, dusC, yohJ, yohK, cdd, sanA, yeiS, preT, preA |
|
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 2204350 | 2236717 | 32368 | 65 [0] | [0] 63 | yehL–preA | yehL,yehM,yehP,yehQ,yehR,yehS,btsR,btsS,mlrA,yohO,yehW,yehX,yehY,osmF,bglX,dld,pbpG,yohC,yohD,yohF,mdtQ,yohP,dusC,yohJ,yohK,cdd,sanA,yeiS,preT,preA |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2204349 | 0 (0.000) | 63 (0.710) | 48/98 | 0.1 | 100% | intergenic (+60/‑247) | yehK/yehL | uncharacterized protein YehK/putative AAA(+) MoxR family ATPase YehL |
| ? | NC_000913 | 2236718 = | 0 (0.000) | intergenic (+218/+25) | preA/mglC | NAD‑dependent dihydropyrimidine dehydrogenase subunit PreA/D‑galactose/methyl‑galactoside ABC transporter membrane subunit | |||||
TAATTCAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/2204301‑2204349‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTATTTCA > NC_000913/2236718‑2236765 TAATTCAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATT < 1:4407107/50‑1TAATTCAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATT < 1:4288410/50‑1TAATTCAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATT > 1:4265770/1‑50TAATTCAAATTGGTCCGACCCGGCGCAACGTCCCAATGGCCTGGATTATT < 1:4739238/50‑1 AATTCAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATT > 1:1271846/1‑49 ATTCAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGA > 1:1454136/1‑50 ATTCAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGA < 1:2433461/50‑1 ATTCAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTG < 1:5790737/49‑1 ATTCAAATTGGTCCGATCCGACGCAACGT‑CCAATGGCCTGGATTATTGAC < 1:3293649/50‑1 TTCAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGAC > 1:5864923/1‑50 TTCAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGAC > 1:3350970/1‑50 TCAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACC > 1:1646319/1‑50 CAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACC < 1:1667653/49‑1 AAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCG < 1:3985183/49‑1 AAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCG > 1:1524257/1‑49 AAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCG < 1:6349951/49‑1 AATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAA < 1:651073/50‑1 AATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAA > 1:5520508/1‑50 AATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAA > 1:1132032/1‑50 TTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAATG < 1:974331/50‑1 TTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAATG < 1:353175/50‑1 TTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAATG < 1:1600016/50‑1 TGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAATGC > 1:1828731/1‑50 GGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAATGCG > 1:6232194/1‑50 GTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAATGCGG < 1:4865889/50‑1 TCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAATGCGGA < 1:5561429/50‑1 CGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAATGCGGACC < 1:6242501/50‑1 CGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAATGCGGAC > 1:1658761/1‑49 CGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAATGCGGAC < 1:5189068/49‑1 GATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAATGCGGACCA > 1:4464879/1‑50 GATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAATGCGGACCA > 1:525877/1‑50 TCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAATGCGGACCACA > 1:3847877/1‑50 TCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAATGCGGACCACA < 1:2593777/50‑1 CCGGCGCGACGTCCCAATGGCCTGGATTATTGACCGAATGCGGACCACAT > 1:4287378/1‑50 CGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAATGCGGACCACAT < 1:3246662/49‑1 GGCGCAACGTCCCAATGGCCTGGATTATTGACCGAATGCGGACCACATT > 1:1984941/1‑49 GGCGCAACGTCCCAATGGCCTGGATTATTGACCGAATGCGGACCACATT > 1:984860/1‑49 GCGCAACGTCCCAATGGCCTGGATTATTGACCGAATGCGGACCACATTCA > 1:3979810/1‑50 GCGCAACGTCCCAATGGCCTGGATTATTGACCGAATGCGGACCACATTCA > 1:3640802/1‑50 GCGCAACGTCCCAATGGCCTGGATTATTGACCGAATGCGGACCACATTCA < 1:4685447/50‑1 GCAACGTCCCAATGGCCTGGATTATTGACCGAATGCGGACCACATTCACA < 1:4803140/50‑1 GCAACGTCCCAATGGCCTGGATTATTGACCGAATGCGGACCACATTCACA > 1:3210785/1‑50 GCAACGTCCCAATGGCCTGGATTATTGACCGAATGCGGACCACATTCACA > 1:6377194/1‑50 CAACGTCCCAATGGCCTGGATTATTGACCGAATGCGGGCCACATTCACAT < 1:4416828/50‑1 AACGTCCCAATGGCCTGGATTATTGACCGAATGCGGACCACATTCACAT > 1:4551172/1‑49 AACGTCCCAATGGCCTGGATTATTGACCGAATGCGGACCACATTCACAT > 1:3308093/1‑49 ACGTCCCAATGGCCTGGATTATTGACCGAATGCGGACCACATTCACATCA < 1:224125/50‑1 CGTCCCAATGGCCTGGATTATTGACCGAATGCGGACCACATTCACATCAT < 1:2024519/50‑1 GTCCCAATGGCCTGGATTATTGACCGAATGCGGACCACATTCACATCATT > 1:782304/1‑50 CAATGGCCTGGATTATTGACCGAATGCGGACCACATTCACATCATTTCTT < 1:6392717/50‑1 AATGGCCTGGATTATTGACCGAATGCGGACCACATTCACATCATTTCTTA < 1:3847043/50‑1 ATGGCCTGGATTATTGACCGAATGCGGACCACATTCACATCATTTCTTAC < 1:5348329/50‑1 TGGCCTGGATTATTGACCGAATGCGGACCACATTCACATCATTTCTTACG > 1:5285540/1‑50 GCCTGGATTATTGACCGAATGCGGACCACATTCACATCATTTCTTACGC < 1:2557894/49‑1 CCTGGATTATTGACCGAATGCGGACCACATTCACATCATTTCTTACGCGC > 1:5474598/1‑50 CTGGATTATTGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCG > 1:4997130/1‑50 TGGATTATTGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCG > 1:1527545/1‑49 TGGATTATTGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCG > 1:3482077/1‑49 GATTATTGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGT < 1:3121406/48‑1 ATTGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTATTT > 1:2092609/1‑48 ATTGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTATTT > 1:4823404/1‑48 TTGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTATTTCA < 1:3346535/49‑1 TTGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTATTTCA < 1:5365946/49‑1 TAATTCAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/2204301‑2204349‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTATTTCA > NC_000913/2236718‑2236765 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |