| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 2,204,350 | Δ32,368 bp | yehL–preA | 30 genes yehL, yehM, yehP, yehQ, yehR, yehS, btsR, btsS, mlrA, yohO, yehW, yehX, yehY, osmF, bglX, dld, pbpG, yohC, yohD, yohF, mdtQ, yohP, dusC, yohJ, yohK, cdd, sanA, yeiS, preT, preA |
|
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 2204350 | 2236717 | 32368 | 65 [0] | [0] 63 | yehL–preA | yehL,yehM,yehP,yehQ,yehR,yehS,btsR,btsS,mlrA,yohO,yehW,yehX,yehY,osmF,bglX,dld,pbpG,yohC,yohD,yohF,mdtQ,yohP,dusC,yohJ,yohK,cdd,sanA,yeiS,preT,preA |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2204349 | 0 (0.000) | 63 (0.710) | 48/98 | 0.1 | 100% | intergenic (+60/‑247) | yehK/yehL | uncharacterized protein YehK/putative AAA(+) MoxR family ATPase YehL |
| ? | NC_000913 | 2236718 = | 0 (0.000) | intergenic (+218/+25) | preA/mglC | NAD‑dependent dihydropyrimidine dehydrogenase subunit PreA/D‑galactose/methyl‑galactoside ABC transporter membrane subunit | |||||
CCTTATCCGGCCTACAAAACCACACAGATCATGATGTTATGTGCGTTTATGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTATTTCA > NC_000913/2236669‑2236765 | taattcaaattggtccgatccggcgcaacgtcccaatggcctggattatt < 1:4407107‑M2/1‑1 (MQ=255)taattcaaattggtccgatccggcgcaacgtcccaatggcctggattatt < 1:4288410‑M2/1‑1 (MQ=255)taattcaaattggtccgatccggcgcaacgtcccaatggcctggattatt > 1:4265770‑M2/50‑50 (MQ=255)taattcaaattggtccgacccggcgcaacgtcccaatggcctggattatt < 1:4739238‑M2/1‑1 (MQ=255) aattcaaattggtccgatccggcgcaacgtcccaatggcctggattatt > 1:1271846‑M2/49‑49 (MQ=255) attcaaattggtccgatccggcgcaacgtcccaatggcctggattatTg < 1:5790737‑M2/2‑1 (MQ=255) attcaaattggtccgatccggcgcaacgtcccaatggcctggattatTGa > 1:1454136‑M2/48‑50 (MQ=255) attcaaattggtccgatccggcgcaacgtcccaatggcctggattatTGa < 1:2433461‑M2/3‑1 (MQ=255) ttcaaattggtccgatccggcgcaacgtcccaatggcctggattatTGAc > 1:5864923‑M2/47‑50 (MQ=255) ttcaaattggtccgatccggcgcaacgtcccaatggcctggattatTGAc > 1:3350970‑M2/47‑50 (MQ=255) attcaaattggtccgatccgacgcaacgtccaatggcctggattatTGAc < 1:3293649‑M2/4‑1 (MQ=255) tcaaattggtccgatccggcgcaacgtcccaatggcctggattatTGAcc > 1:1646319‑M2/46‑50 (MQ=255) caaattggtccgatccggcgcaacgtcccaatggcctggattatTGAcc < 1:1667653‑M2/5‑1 (MQ=255) aaattggtccgatccggcgcaacgtcccaatggcctggattatTGACCg < 1:3985183‑M2/6‑1 (MQ=255) aaattggtccgatccggcgcaacgtcccaatggcctggattatTGACCg > 1:1524257‑M2/44‑49 (MQ=255) aaattggtccgatccggcgcaacgtcccaatggcctggattatTGACCg < 1:6349951‑M2/6‑1 (MQ=255) aattggtccgatccggcgcaacgtcccaatggcctggattatTGACCGaa < 1:651073‑M2/8‑1 (MQ=255) aattggtccgatccggcgcaacgtcccaatggcctggattatTGACCGaa > 1:5520508‑M2/43‑50 (MQ=255) aattggtccgatccggcgcaacgtcccaatggcctggattatTGACCGaa > 1:1132032‑M2/43‑50 (MQ=255) ttggtccgatccggcgcaacgtcccaatggcctggattatTGACCGAATg < 1:974331‑M2/10‑1 (MQ=255) ttggtccgatccggcgcaacgtcccaatggcctggattatTGACCGAATg < 1:353175‑M2/10‑1 (MQ=255) ttggtccgatccggcgcaacgtcccaatggcctggattatTGACCGAATg < 1:1600016‑M2/10‑1 (MQ=255) tggtccgatccggcgcaacgtcccaatggcctggattatTGACCGAATGc > 1:1828731‑M2/40‑50 (MQ=255) ggtccgatccggcgcaacgtcccaatggcctggattatTGACCGAATGCg > 1:6232194‑M2/39‑50 (MQ=255) gtccgatccggcgcaacgtcccaatggcctggattatTGACCGAATGCgg < 1:4865889‑M2/13‑1 (MQ=255) tccgatccggcgcaacgtcccaatggcctggattatTGACCGAATGCGGa < 1:5561429‑M2/14‑1 (MQ=255) cgatccggcgcaacgtcccaatggcctggattatTGACCGAATGCGGAcc < 1:6242501‑M2/16‑1 (MQ=255) cgatccggcgcaacgtcccaatggcctggattatTGACCGAATGCGGAc > 1:1658761‑M2/35‑49 (MQ=255) cgatccggcgcaacgtcccaatggcctggattatTGACCGAATGCGGAc < 1:5189068‑M2/15‑1 (MQ=255) gatccggcgcaacgtcccaatggcctggattatTGACCGAATGCGGACca > 1:4464879‑M2/34‑50 (MQ=255) gatccggcgcaacgtcccaatggcctggattatTGACCGAATGCGGACca > 1:525877‑M2/34‑50 (MQ=255) tccggcgcaacgtcccaatggcctggattatTGACCGAATGCGGACcaca > 1:3847877‑M2/32‑50 (MQ=255) tccggcgcaacgtcccaatggcctggattatTGACCGAATGCGGACcaca < 1:2593777‑M2/19‑1 (MQ=255) ccggcgcgacgtcccaatggcctggattatTGACCGAATGCGGACCACAt > 1:4287378‑M2/31‑50 (MQ=255) cggcgcaacgtcccaatggcctggattatTGACCGAATGCGGACCACAt < 1:3246662‑M2/20‑1 (MQ=255) ggcgcaacgtcccaatggcctggattatTGACCGAATGCGGACCACAtt > 1:1984941‑M2/29‑49 (MQ=255) ggcgcaacgtcccaatggcctggattatTGACCGAATGCGGACCACAtt > 1:984860‑M2/29‑49 (MQ=255) gcgcaacgtcccaatggcctggattatTGACCGAATGCGGACCACATTca > 1:3979810‑M2/28‑50 (MQ=255) gcgcaacgtcccaatggcctggattatTGACCGAATGCGGACCACATTca > 1:3640802‑M2/28‑50 (MQ=255) gcgcaacgtcccaatggcctggattatTGACCGAATGCGGACCACATTca < 1:4685447‑M2/23‑1 (MQ=255) gcaacgtcccaatggcctggattatTGACCGAATGCGGACCACATTcaca < 1:4803140‑M2/25‑1 (MQ=255) gcaacgtcccaatggcctggattatTGACCGAATGCGGACCACATTcaca > 1:3210785‑M2/26‑50 (MQ=255) gcaacgtcccaatggcctggattatTGACCGAATGCGGACCACATTcaca > 1:6377194‑M2/26‑50 (MQ=255) caacgtcccaatggcctggattatTGACCGAATGCGGGCCACATTCAcat < 1:4416828‑M2/26‑1 (MQ=255) aacgtcccaatggcctggattatTGACCGAATGCGGACCACATTCAcat > 1:4551172‑M2/24‑49 (MQ=255) aacgtcccaatggcctggattatTGACCGAATGCGGACCACATTCAcat > 1:3308093‑M2/24‑49 (MQ=255) acgtcccaatggcctggattatTGACCGAATGCGGACCACATTCAcatca < 1:224125‑M2/28‑1 (MQ=255) cgtcccaatggcctggattatTGACCGAATGCGGACCACATTCAcatcat < 1:2024519‑M2/29‑1 (MQ=255) gtcccaatggcctggattatTGACCGAATGCGGACCACATTCACATCAtt > 1:782304‑M2/21‑50 (MQ=255) caatggcctggattatTGACCGAATGCGGACCACATTCACATCATTTCtt < 1:6392717‑M2/34‑1 (MQ=255) aatggcctggattatTGACCGAATGCGGACCACATTCACATCATTTCTTa < 1:3847043‑M2/35‑1 (MQ=255) atggcctggattatTGACCGAATGCGGACCACATTCACATCATTTCTTAc < 1:5348329‑M2/36‑1 (MQ=255) tggcctggattatTGACCGAATGCGGACCACATTCACATCATTTCTTAcg > 1:5285540‑M2/14‑50 (MQ=255) gcctggattatTGACCGAATGCGGACCACATTCACATCATTTCTTAcgc < 1:2557894‑M2/38‑1 (MQ=255) cctggattatTGACCGAATGCGGACCACATTCACATCATTTCTTAcgcgc > 1:5474598‑M2/11‑50 (MQ=255) ctggattatTGACCGAATGCGGACCACATTCACATCATTTCTTAcgcgcg > 1:4997130‑M2/10‑50 (MQ=255) tggattatTGACCGAATGCGGACCACATTCACATCATTTCTTAcgcgcg > 1:1527545‑M2/9‑49 (MQ=255) tggattatTGACCGAATGCGGACCACATTCACATCATTTCTTAcgcgcg > 1:3482077‑M2/9‑49 (MQ=255) gattatTGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGt < 1:3121406‑M2/42‑1 (MQ=255) atTGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTAttt > 1:2092609‑M2/3‑48 (MQ=255) atTGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTAttt > 1:4823404‑M2/3‑48 (MQ=255) tTGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTATTTCa < 1:3346535‑M2/48‑1 (MQ=255) tTGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTATTTCa < 1:5365946‑M2/48‑1 (MQ=255) | CCTTATCCGGCCTACAAAACCACACAGATCATGATGTTATGTGCGTTTATGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTATTTCA > NC_000913/2236669‑2236765 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |