Predicted mutation
evidence seq id position mutation annotation gene description
MC JC NC_000913 2,204,350 Δ32,368 bp yehL–preA 30 genes

Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ NC_000913 2204350 2236717 32368 65 [0] [0] 63 yehL–preA yehL,yehM,yehP,yehQ,yehR,yehS,btsR,btsS,mlrA,yohO,yehW,yehX,yehY,osmF,bglX,dld,pbpG,yohC,yohD,yohF,mdtQ,yohP,dusC,yohJ,yohK,cdd,sanA,yeiS,preT,preA

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 22043490 (0.000)63 (0.710) 48/98 0.1 100% intergenic (+60/‑247) yehK/yehL uncharacterized protein YehK/putative AAA(+) MoxR family ATPase YehL
?NC_000913 2236718 = 0 (0.000)intergenic (+218/+25) preA/mglC NAD‑dependent dihydropyrimidine dehydrogenase subunit PreA/D‑galactose/methyl‑galactoside ABC transporter membrane subunit

ATAATTCAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATAAATCTCATTATCTTAATTGCAACGGGGTCCAGCCGTGGTTATAATTC  >  NC_000913/2204300‑2204397
                                                 |                                                
ataatTCAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATtat                                                  <  1:4669286/50‑1 (MQ=255)
ataatTCAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATtat                                                  >  1:3296303/1‑50 (MQ=255)
 tAATTCAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATt                                                 <  1:4407107‑M1/50‑2 (MQ=255)
 tAATTCAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATt                                                 <  1:4288410‑M1/50‑2 (MQ=255)
 tAATTCAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATt                                                 >  1:4265770‑M1/1‑49 (MQ=255)
 tAATTCAAATTGGTCCGACCCGGCGCAACGTCCCAATGGCCTGGATTATt                                                 <  1:4739238‑M1/50‑2 (MQ=255)
  aaTTCAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATt                                                 >  1:1271846‑M1/1‑48 (MQ=255)
   aTTCAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATtga                                               >  1:1454136‑M1/1‑47 (MQ=255)
   aTTCAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATtga                                               <  1:2433461‑M1/50‑4 (MQ=255)
   aTTCAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATtg                                                <  1:5790737‑M1/49‑3 (MQ=255)
   aTTCAAATTGGTCCGATCCGACGCAACGT‑CCAATGGCCTGGATTATtgac                                              <  1:3293649‑M1/50‑5 (MQ=255)
    ttCAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATtgac                                              >  1:3350970‑M1/1‑46 (MQ=255)
    ttCAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATtgac                                              >  1:5864923‑M1/1‑46 (MQ=255)
     tCAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATtgacc                                             >  1:1646319‑M1/1‑45 (MQ=255)
      cAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATtgacc                                             <  1:1667653‑M1/49‑6 (MQ=255)
       aaaTTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATtgaccg                                            <  1:3985183‑M1/49‑7 (MQ=255)
       aaaTTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATtgaccg                                            <  1:6349951‑M1/49‑7 (MQ=255)
       aaaTTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATtgaccg                                            >  1:1524257‑M1/1‑43 (MQ=255)
        aaTTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATtgaccgaa                                          <  1:651073‑M1/50‑9 (MQ=255)
        aaTTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATtgaccgaa                                          >  1:5520508‑M1/1‑42 (MQ=255)
        aaTTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATtgaccgaa                                          >  1:1132032‑M1/1‑42 (MQ=255)
          ttGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATtgaccgaatg                                        <  1:974331‑M1/50‑11 (MQ=255)
          ttGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATtgaccgaatg                                        <  1:1600016‑M1/50‑11 (MQ=255)
          ttGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATtgaccgaatg                                        <  1:353175‑M1/50‑11 (MQ=255)
           tGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATtgaccgaatgc                                       >  1:1828731‑M1/1‑39 (MQ=255)
            ggTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATtgaccgaatgcg                                      >  1:6232194‑M1/1‑38 (MQ=255)
             gTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATtgaccgaatgcgg                                     <  1:4865889‑M1/50‑14 (MQ=255)
              tCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATtgaccgaatgcgga                                    <  1:5561429‑M1/50‑15 (MQ=255)
                cGATCCGGCGCAACGTCCCAATGGCCTGGATTATtgaccgaatgcggacc                                  <  1:6242501‑M1/50‑17 (MQ=255)
                cGATCCGGCGCAACGTCCCAATGGCCTGGATTATtgaccgaatgcggac                                   <  1:5189068‑M1/49‑16 (MQ=255)
                cGATCCGGCGCAACGTCCCAATGGCCTGGATTATtgaccgaatgcggac                                   >  1:1658761‑M1/1‑34 (MQ=255)
                 gATCCGGCGCAACGTCCCAATGGCCTGGATTATtgaccgaatgcggacca                                 >  1:4464879‑M1/1‑33 (MQ=255)
                 gATCCGGCGCAACGTCCCAATGGCCTGGATTATtgaccgaatgcggacca                                 >  1:525877‑M1/1‑33 (MQ=255)
                   tCCGGCGCAACGTCCCAATGGCCTGGATTATtgaccgaatgcggaccaca                               >  1:3847877‑M1/1‑31 (MQ=255)
                   tCCGGCGCAACGTCCCAATGGCCTGGATTATtgaccgaatgcggaccaca                               <  1:2593777‑M1/50‑20 (MQ=255)
                    ccGGCGCGACGTCCCAATGGCCTGGATTATtgaccgaatgcggaccacat                              >  1:4287378‑M1/1‑30 (MQ=255)
                     cGGCGCAACGTCCCAATGGCCTGGATTATtgaccgaatgcggaccacat                              <  1:3246662‑M1/49‑21 (MQ=255)
                      ggCGCAACGTCCCAATGGCCTGGATTATtgaccgaatgcggaccacatt                             >  1:984860‑M1/1‑28 (MQ=255)
                      ggCGCAACGTCCCAATGGCCTGGATTATtgaccgaatgcggaccacatt                             >  1:1984941‑M1/1‑28 (MQ=255)
                       gcgcAACGTCCCAATGGCCTGGATTATtgaccgaatgcggaccacattca                           <  1:4685447‑M1/50‑24 (MQ=255)
                       gcgcAACGTCCCAATGGCCTGGATTATtgaccgaatgcggaccacattca                           >  1:3979810‑M1/1‑27 (MQ=255)
                       gcgcAACGTCCCAATGGCCTGGATTATtgaccgaatgcggaccacattca                           >  1:3640802‑M1/1‑27 (MQ=255)
                         gcAACGTCCCAATGGCCTGGATTATtgaccgaatgcggaccacattcaca                         >  1:6377194‑M1/1‑25 (MQ=255)
                         gcAACGTCCCAATGGCCTGGATTATtgaccgaatgcggaccacattcaca                         <  1:4803140‑M1/50‑26 (MQ=255)
                         gcAACGTCCCAATGGCCTGGATTATtgaccgaatgcggaccacattcaca                         >  1:3210785‑M1/1‑25 (MQ=255)
                          cAACGTCCCAATGGCCTGGATTATtgaccgaatgcgggccacattcacat                        <  1:4416828‑M1/50‑27 (MQ=255)
                           aaCGTCCCAATGGCCTGGATTATtgaccgaatgcggaccacattcacat                        >  1:4551172‑M1/1‑23 (MQ=255)
                           aaCGTCCCAATGGCCTGGATTATtgaccgaatgcggaccacattcacat                        >  1:3308093‑M1/1‑23 (MQ=255)
                            aCGTCCCAATGGCCTGGATTATtgaccgaatgcggaccacattcacatca                      <  1:224125‑M1/50‑29 (MQ=255)
                             cGTCCCAATGGCCTGGATTATtgaccgaatgcggaccacattcacatcat                     <  1:2024519‑M1/50‑30 (MQ=255)
                              gTCCCAATGGCCTGGATTATtgaccgaatgcggaccacattcacatcatt                    >  1:782304‑M1/1‑20 (MQ=255)
                                  cAATGGCCTGGATTATtgaccgaatgcggaccacattcacatcatttctt                <  1:6392717‑M1/50‑35 (MQ=255)
                                   aaTGGCCTGGATTATtgaccgaatgcggaccacattcacatcatttctta               <  1:3847043‑M1/50‑36 (MQ=255)
                                    aTGGCCTGGATTATtgaccgaatgcggaccacattcacatcatttcttac              <  1:5348329‑M1/50‑37 (MQ=255)
                                     tGGCCTGGATTATtgaccgaatgcggaccacattcacatcatttcttacg             >  1:5285540‑M1/1‑13 (MQ=255)
                                       gCCTGGATTATtgaccgaatgcggaccacattcacatcatttcttacgc            <  1:2557894‑M1/49‑39 (MQ=255)
                                        ccTGGATTATtgaccgaatgcggaccacattcacatcatttcttacgcgc          >  1:5474598‑M1/1‑10 (MQ=255)
                                         cTGGATTATtgaccgaatgcggaccacattcacatcatttcttacgcgcg         >  1:4997130‑M1/1‑9 (MQ=255)
                                          tGGATTATtgaccgaatgcggaccacattcacatcatttcttacgcgcg         >  1:1527545‑M1/1‑8 (MQ=255)
                                          tGGATTATtgaccgaatgcggaccacattcacatcatttcttacgcgcg         >  1:3482077‑M1/1‑8 (MQ=255)
                                            gATTATtgaccgaatgcggaccacattcacatcatttcttacgcgcgt        <  1:3121406‑M1/48‑43 (MQ=255)
                                                attgaccgaatgcggaccacattcacatcatttcttacgcgcgtattt    >  1:4823404‑M1/1‑2 (MQ=255)
                                                attgaccgaatgcggaccacattcacatcatttcttacgcgcgtattt    >  1:2092609‑M1/1‑2 (MQ=255)
                                                 ttgaccgaatgcggaccacattcacatcatttcttacgcgcgtatttca  <  1:3346535‑M1/49‑49 (MQ=255)
                                                 ttgaccgaatgcggaccacattcacatcatttcttacgcgcgtatttca  <  1:5365946‑M1/49‑49 (MQ=255)
                                                 |                                                
ATAATTCAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATAAATCTCATTATCTTAATTGCAACGGGGTCCAGCCGTGGTTATAATTC  >  NC_000913/2204300‑2204397

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑