| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 2,286,401 | Δ3,780 bp | [yejO]–[yejO] | [yejO], insH‑8, [yejO] | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 2286401 | 2290180 | 3780 | 105 [0] | [0] 104 | [yejO]–[yejO] | [yejO],insH‑8,[yejO] |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2286400 | 0 (0.000) | 104 (1.170) | 65/98 | 0.0 | 100% | pseudogene (2515/2525 nt) | yejO | adhesin‑like autotransporter YejO |
| ? | NC_000913 | 2290181 = | 0 (0.000) | intergenic (‑1/‑319) | yejO/narP | adhesin‑like autotransporter YejO/DNA‑binding transcriptional dual regulator NarP | |||||
Only 100 of 104 total aligned reads displayed.
CAGACCGTGACACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/2286352‑2286400‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGGGTACAG > NC_000913/2290181‑2290229 CAGACCGTGACACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCT > 1:4332436/1‑50CAGACCGTGACACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCT > 1:2659925/1‑50CAGACCGTGACACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCT > 1:3098674/1‑50CAGACCGTGACACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCT > 1:1317723/1‑50 AGACCGTGACACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCTG < 1:5980015/50‑1 AGACCGTGACACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCT > 1:3601136/1‑49 GACCGTGACACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCT > 1:6083023/1‑48 GACCGTGACACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCT > 1:723967/1‑48 GACCGTGACACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCT > 1:5205835/1‑48 ACCGTGACGCATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCTGAG < 1:1253407/50‑1 ACCGTGACACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCTGAG < 1:10971/50‑1 ACCGTGACACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCTGAG > 1:4971719/1‑50 ACCGTGACACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCTGAG > 1:5731534/1‑50 CCGTGACACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCTGAGC < 1:5668266/50‑1 CGTGACACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCTGAGCT > 1:1131854/1‑50 GTGACACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCTGAGCTT > 1:1607572/1‑50 GTGACACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCTGAGCTT < 1:5810972/50‑1 GTGACACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCTGAGCTT < 1:5959837/50‑1 GTGACACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCTGAGCTT < 1:2441921/50‑1 GTGACACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCTGAGCTT < 1:418633/50‑1 GTGACACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCTGAGCTT > 1:549934/1‑50 TGACACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCTGAGCTTT < 1:2604209/50‑1 TGACACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCTGAGCTTT < 1:6700262/50‑1 TGACACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCTGAGCTTT < 1:4042803/50‑1 TGACACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCTGAGCTTT > 1:5176853/1‑50 TGACACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCTGAGCTTT > 1:6170667/1‑50 GACACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCTGAGCTTT > 1:4252453/1‑49 GACACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCTGAGCTTT > 1:1875903/1‑49 ACACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCTGAGCTTTCA < 1:2359318/50‑1 ACACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCTGAGCTTTC < 1:2677951/49‑1 CACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCTGAGCTTTCAT > 1:5566091/1‑50 CACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCTGAGCTTTCAT > 1:1237587/1‑50 ACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCTGAGCTTTCATC > 1:794011/1‑50 ACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCTGAGCTTTCATC > 1:2074901/1‑50 ACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCTGAGCTTTCATC > 1:2944418/1‑50 ACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCTGAGCTTTCATC < 1:1477756/50‑1 CATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCTGAGCTTTCATCC < 1:3953635/50‑1 TCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCTGAGCTTTCATCCTA < 1:2581335/50‑1 TCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCTGAGCTTTCATCCTA > 1:1091103/1‑50 ACAGCCTGTTTATTTTCTGTTATCAGAACGTCCTGAGCTTTCATCCTAT > 1:1470988/1‑49 ACAGCCTGTTTATTTTCTGTTATCAGAACGTCCTGAGCTTTCATCCTAT < 1:2576179/49‑1 CAGCCTGTTTATTTTCTGTTATCAGAACGTCCTGAGCTTTCATCCTATGA < 1:3258288/50‑1 CAGCCTGTTTATTTTCTGTTATCAGAACGTCCTGAGCTTTCATCCTATG > 1:3110342/1‑49 CAGCCTGTTTATTTTCTGTTATCAGAACGTCCTGAGCTTTCATCCTATG > 1:5575881/1‑49 AGCCTGTTTATTTTCTGTTATCAGAACGTCCTGAGCTTTCATCCTATGAA < 1:2596855/50‑1 AGCCTGTTTATTTTCTGTTATCAGAACGTCCTGAGCTTTCATCCTATGA > 1:1702150/1‑49 CCTGTTTATTTTCTGTTATCAGAACGTCCTGAGCTTTCATCCTATGAAAT < 1:1012541/50‑1 CCTGTTTATTTTCTGTTATCAGAACGTCCTGAGCTTTCATCCTATGAAAT < 1:1388342/50‑1 CCTGTTTATTTTCTGTTATCAGAACGTCCTGAGCTTTCATCCTATGAAAT > 1:629231/1‑50 CTGTTTATTTTCTGTTATCAGAACGTCCTGAGCTTTCATCCTATGAAATT < 1:5722597/50‑1 CTGTTTATTTTCTGTTATCAGAACGTCCTGAGCTTTCATCCTATGAAAT > 1:4719008/1‑49 TGTTTATTTTCTGTTATCAGAACGTCCTGAGCTTTCATCCTATGAAATT > 1:5130931/1‑49 TTTATTTTCTGTTATCAGAACGTCCTGAGCTTTCATCCTATGAAATTAAT < 1:328933/50‑1 TTTATTTTCTGTTATCAGAACGTCCTGAGCTTTCATCCTATGAAATTAAT < 1:5435986/50‑1 TTATTTTCTGTTATCAGAACGTCCTGAGCTTTCATCCTATGAAATTAATT > 1:2682106/1‑50 ATTTTCTGTTATCAGAACGTCCTGAGCTTTCATCCTATGAAATTAATTGC > 1:3593260/1‑50 TTCTGTTATCAGAACGTCCTGAGCTTTCATCCTATGAAATTAATTGCTGT > 1:3450573/1‑50 TTCTGTTATCAGAACGTCCTGAGCTTTCATCCTATGAAATTAATTGCTG < 1:725916/49‑1 TCTGTTATCAGAACGTCCTGAGCTTTCATCCTATGAAATTAATTGCTGT > 1:2496052/1‑49 TCTGTTATCAGAACGTCCTGAGCTTTCATCCTATGAAATTAATTGCTGT < 1:4600361/49‑1 CTGTTATCAGAACGTCCTGAGCTTTCATCCTATGAAATTAATTGCTGTT > 1:4676385/1‑49 CTGTTATCAGAACGTCCTGAGCTTTCATCCTATGAAATTAATTGCTGTT > 1:6272571/1‑49 TTATCAGAACGTCCTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAA < 1:2996481/50‑1 TTATCAGAACGTCCTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAA < 1:4691966/49‑1 TTATCAGAACGTCCTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAA < 1:5092655/49‑1 TTATCAGAACGTCCTGAGCTTTCATCCTATGAAATTAATTGCTGTTAA < 1:4300714/48‑1 TTATCAGAACGTCCTGAGCTTTCATCCTATGAAATTAATTGCTGTTAA > 1:195333/1‑48 TTATCAGAACGTCCTGAGCTTTCATCCTATGAAATTAATTGCTGTTA < 1:3039501/47‑1 TATCAGAACGTCCTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAG > 1:5456122/1‑50 ATCAGAACGTCCTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAG > 1:1824540/1‑49 ATCAGAACGTCCTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAG < 1:3348029/49‑1 TCAGAACGTCCTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCA < 1:6008220/50‑1 TCAGAACGTCCTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGC < 1:4391008/49‑1 CAGAACGTCCTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCAT > 1:2802434/1‑50 AGAACGTCCTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATT > 1:6634017/1‑50 AGAACGTCCTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATT < 1:879609/50‑1 AGAACGTCCTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATT > 1:1056581/1‑50 AGAACGTCCTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATT > 1:2280136/1‑50 AGAACGTCCTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATT < 1:429251/50‑1 AGAACGTCCTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATT > 1:2347747/1‑50 AGAACGTCCTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATT < 1:3397235/50‑1 AGAACGTCCTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATT > 1:3072437/1‑50 AGAACGTCCTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCAT < 1:3311653/49‑1 AACGTCCTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGG < 1:6364776/50‑1 ACGTCCTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGGG < 1:894015/50‑1 ACGTCCTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGGG > 1:1114863/1‑50 ACGTCCTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGGG < 1:6567443/50‑1 ACGTCCTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGGG < 1:2803144/50‑1 CGTCCTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGGGT < 1:4795287/50‑1 CGTCCTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGGGT < 1:4899680/50‑1 CGTCCTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGGG > 1:3643714/1‑49 CGTCCTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGGG > 1:1661967/1‑49 GTCCTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGGGTA > 1:6106692/1‑50 GTCCTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGGGTA > 1:3123040/1‑50 TCCTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGGGTAC < 1:2919550/50‑1 TCCTGAGCTTTCATCCTATGAAATTAATTGCCGTTAAAAGCATTGGGTA > 1:3319096/1‑49 CCTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGGGTA > 1:4630017/1‑48 CCTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGGGTA > 1:2169655/1‑48 CTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGGGTACAG < 1:6107885/50‑1 CTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGGGTACAG < 1:1193570/50‑1 CAGACCGTGACACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/2286352‑2286400‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGGGTACAG > NC_000913/2290181‑2290229 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |