| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 2,466,545 | Δ9,634 bp | [intS]–[ypdJ] | 15 genes [intS], yfdG, yfdH, yfdI, yfdK, yfdL, yfdM, yfdN, yfdO, yfdP, yfdQ, yfdR, yfdS, [yfdT], [ypdJ] |
|
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 2466545 | 2476178 | 9634 | 81 [0] | [0] 80 | [intS]–[ypdJ] | [intS],yfdG,yfdH,yfdI,yfdK,yfdL,yfdM,yfdN,yfdO,yfdP,yfdQ,yfdR,yfdS,[yfdT],[ypdJ] |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2466544 | 0 (0.000) | 78 (0.880) | 51/98 | 0.0 | 100% | intergenic (+161/‑1) | argW/intS | tRNA‑Arg/CPS‑53 (KpLE1) prophage; prophage CPS‑53 integrase |
| ? | NC_000913 | 2476179 = | 0 (0.000) | coding (86/141 nt) | ypdJ | CPS‑53 (KpLE1) prophage; putative uncharacterized protein YpdJ | |||||
TGACGGGTAAAAAGTGGATAAAATAATTTTACCCACCGGATTTTTACCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/2466496‑2466544‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTTCTTAAAAT > NC_000913/2476179‑2476227 TGACGGGTAAAAAGTGGATAAAATAATTTTACCCACCGGATTTTTACCCT < 1:329300/50‑1TGACGGGTAAAAAGTGGATAAAATAATTTTACCCACCGGATTTTTACCCT < 1:6188480/50‑1 CGGGTAAAAAGTGGATAAAATAATTTTACCCACCGGATTTTTACCCTA > 1:5699846/1‑48 CGGGTAAAAAGTGGATAAAATAATTTTACCCACCGGATTTTTACCCTA > 1:4556481/1‑48 GGGTAAAAAGTGGATAAAATAATTTTACCCACCGGATTTTTACCCTAGAG > 1:6434905/1‑50 GGGTAAAAAGTGGATAAAATAATTTTACCCACCGGATTTTTACCCTAGAG > 1:6630663/1‑50 GGGTAAAAAGTGGATAAAATAATTTTACCCACCGGATTTTTACCCTAGAG > 1:1246723/1‑50 GGTAAAAAGTGGATAAAATAATTTTACCCACCGGATTTTTACCCTAGAGC > 1:906197/1‑50 GTAAAAAGTGGATAAAATAATTTTACCCACCGGATTTTTGCCCTAGAGC > 1:6297550/1‑49 GTAAAAAGTGGATAAAATAATTTTACCCACCGGATTTTTACCCTAGAGC > 1:6110142/1‑49 GTAAAAAGTGGATAAAATAATTTTACCCACCGGATTTTTACCCTAGAGC > 1:1559474/1‑49 AAAAAGTGGATAAAATAATTTTACCCACCGGATTTTTACCCTAGAGCCA > 1:6188700/1‑49 AAAAGTGGATAAAATAATTTTACCCACCGGATTTTTACCCTAGAGCCATA > 1:5428453/1‑50 AAAAGTGGATAAAATAATTTTACCCACCGGATTTTTACCCTAGAGCCAT < 1:3022650/49‑1 AAGTGGATAAAATAATTTTACCCACCGGATTTTTACCCTAGAGCCATA > 1:6545830/1‑48 AGTGGATAAAATAATTTTACCCACCGGATTTTTACCCTAGAGCCATACAG > 1:3543653/1‑50 AGTGGATAAAATAATTTTACCCACCGGATTTTTACCCTAGAGCCATACAG > 1:2726750/1‑50 GTGGATAAAATAATTTTACCCACCGGATTTTTACCCTAGAGCCATACAGC > 1:5816035/1‑50 TGGATAAAATAATTTTACCCACCGGATTTTTACCCTAGAGCCATACAGCC > 1:6087121/1‑50 GGATAAAATAATTTTACCCACCGGATTTTTACCCTAGAGCCATACAGCCT > 1:4452106/1‑50 GATAAAATAATTTTACCCACCGGATTTTTACCCTAGAGCCATACAGCCTC < 1:851633/50‑1 GATAAAATAATTTTACCCACCGGATTTTTACCCTAGAGCCATACAGCCTC < 1:2723278/50‑1 GATAAAATAATTTTACCCACCGGATTTTTACCCTAGAGCCATACAGCCT < 1:1310967/49‑1 TAAAATAATTTTACCCACCGGATTTTTACCCTAGAGCCATACAGCCTCAC < 1:2862571/50‑1 TAAAATAATTTTACCCACCGGATTTTTACCCTAGAGCCATACAGCCTCAC < 1:2002480/50‑1 TAAAATAATTTTACCCACCGGATTTTTACCCTAGAGCCATACAGCCTCA > 1:4296798/1‑49 AAATAATTTTACCCACCGGATTTTTACCCTAGAGCCATACAGCCTCACAC > 1:4463695/1‑50 AAATAATTTTACCCACCGGATTTTTACCCTAGAGCCATACAGCCTCACAC > 1:49636/1‑50 AAATAATTTTACCCACCGGATTTTTACCCTAGAGCCATACAGCCTCACA < 1:1821196/49‑1 AATAATTTTACCCACCGGATTTTTACCCTAGAGCCATACAGCCTCACACT > 1:1763254/1‑50 ATAATTTTACCCACCGGATTTTTACCCTAGAGCCATACAGCCTCACACTC < 1:2564882/50‑1 ATAATTTTACCCACCGGATTTTTACCCTAGAGCCATACAGCCTCACACTC > 1:4840908/1‑50 TAATTTTACCCACCGGATTTTTACCCTAGAGCCATACAGCCTCACACTC > 1:1240414/1‑49 TAATTTTACCCACCGGATTTTTACCCTAGAGCCATACAGCCTCACACTC > 1:5041402/1‑49 AATTTTACCCACCGGATTTTTACCCTAGAGCCATACAGCCTCACACTCGA > 1:702940/1‑50 AATTTTACCCACCGGATTTTTACCCTAGAGCCATACAGCCTCACACTCGA > 1:1279510/1‑50 AATTTTACCCACCGGATTTTTACCCTAGAGCCATACAGCCTCACACTCGA > 1:4312351/1‑50 ATTTTACCCACCGGATTTTTACCCTAGAGCCATACAGCCTCACACTCGAT < 1:3353672/50‑1 ATTTTACCCACCGGATTTTTACCCTAGAGCCATACAGCCTCACACTCGAT < 1:4110014/50‑1 TTTACCCACCGGATTTTTACCCTAGAGCCATACAGCCTCACACTCGAT > 1:3077525/1‑48 TTTACCCACCGGATTTTTACCCTAGAGCCATACAGCCTCACACTCGAT > 1:3901330/1‑48 TTACCCACCGGATTTTTACCCTAGAGCCATACAGCCTCACACTCGATGAG > 1:496319/1‑50 TTACCCACCGGATTTTTACCCTAGAGCCATACAGCCTCACACTCGATGA < 1:6423804/49‑1 ACCCACCGGATTTTTACCCTAGAGCCATACAGCCTCACACTCGATGAGGC > 1:237969/1‑50 ACCCACCGGATTTTTACCCTAGAGCCATACAGCCTCACACTCGATGAGGC > 1:5147888/1‑50 ACCCACCGGATTTTTACCCTAGAGCCATACAGCCTCACACTCGATGAGGC > 1:445514/1‑50 ACCCACCGGATTTTTACCCTAGAGCCATACAGCCTCACACTCGATGAGGC > 1:2301956/1‑50 ACCCACCGGATTTTTACCCTAGAGCCATACAGCCTCACACTCGATGAGGC > 1:1024091/1‑50 ACCCACCGGATTTTTACCCTAGAGCCATACAGCCTCACACTCGATGAGG < 1:1657114/49‑1 ACCCACCGGATTTTTACCCTAGAGCCATACAGCCTCACACTCGATGAGG < 1:6023165/49‑1 ACCCACCGGATTTTTACCCTAGAGCCATACAGCCTCACACTCGATGAGG < 1:276897/49‑1 CCCACCGGATTTTTACCCTAGAGCCATACAGCCTCACACTCGATGAGGCC < 1:891695/50‑1 CCCACCGGATTTTTACCCTAGAGCCATACAGCCTCACACTCGATGAGGCC > 1:1802406/1‑50 CCCACCGGATTTTTACCCTAGAGCCATACAGCCTCACACTCGATGAGGCC > 1:6051950/1‑50 CCACCGGATTTTTACCCTAGAGCCATACAGCCTCACACTCGATGAGGCCT > 1:1394790/1‑50 CACCGGATTTTTACCCTAGAGCCATACAGCCTCACACTCGATGAGGCCTG < 1:1658295/50‑1 CACCGGATTTTTACCCTAGAGCCATACAGCCTCACACTCGATGAGGCCTG < 1:3772330/50‑1 CACCGGATTTTTACCCTAGAGCCATACAGCCTCACACTCGATGAGGCCTG > 1:1128205/1‑50 CACCGGATTTTTACCCTAGAGCCATACAGCCTCACACTCGATGAGGCCTG < 1:2413905/50‑1 ACCGGATTTTTACCCTAGAGCCATACAGCCTCACACTCGATGAGGCCTGT < 1:3810797/50‑1 ACCGGATTTTTACCCTAGAGCCATACAGCCTCACACTCGATGAGGCCTGT > 1:6680536/1‑50 ACCGGATTTTTACCCTAGAGCCATACAGCCTCACACTCGATGAGGCCTGT < 1:2937028/50‑1 CCGGATTTTTACCCTAGAGCCATACAGCCTCACACTCGATGAGGCCTGT > 1:1378896/1‑49 CGGATTTTTACCCTAGAGCCATACAGCCTCACACTCGATGAGGCCTGT > 1:5496109/1‑48 GATTTTTACCCTAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGT < 1:2089512/50‑1 ATTTTTACCCTAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTT < 1:179892/50‑1 TTTTTACCCTAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTT > 1:5361854/1‑50 TTTTTACCCTAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTT < 1:1587036/50‑1 TTTACCCTAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTTCT > 1:1005453/1‑50 TTACCCTAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTTCT > 1:2154580/1‑49 TACCCTAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTTCTT < 1:1478261/49‑1 TACCCTAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTTCTT < 1:2257535/49‑1 CCCTAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTTCTTAAA < 1:4001793/50‑1 CCTAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTTCTTAAAA > 1:2411479/1‑50 CCTAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTTCTTAAAA < 1:3166265/50‑1 CTAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTTCTTAAAAT < 1:3845859/50‑1 CTAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTTCTTAAAA > 1:4754885/1‑49 CTAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTTCTTAAAA > 1:92892/1‑49 TGACGGGTAAAAAGTGGATAAAATAATTTTACCCACCGGATTTTTACCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/2466496‑2466544‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTTCTTAAAAT > NC_000913/2476179‑2476227 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |