| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 3,761,993 | Δ8,250 bp | rhsA–yibV | rhsA, yibA, yibJ, yibG, yibS, yibV | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 3761993 | 3770242 | 8250 | 133 [0] | [0] 131 | rhsA–yibV | rhsA,yibA,yibJ,yibG,yibS,yibV |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 3761992 | 0 (0.000) | 129 (1.490) | 74/96 | 0.0 | 100% | intergenic (‑37/‑191) | yibF/rhsA | glutathione transferase‑like protein YibF/rhs element protein RhsA |
| ? | NC_000913 | 3770243 = | 0 (0.000) | coding (1137/1137 nt) | yibH | inner membrane protein YibH | |||||
Only 100 of 133 total aligned reads displayed.
CGACGAGTTTCATGCCGAGTCCTTTGTGCGAGGAAAAATATCAGTATGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/3761943‑3761992‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cTCAATGATCCAAATAAAGATAATGCATCCAGCTGGTCATTCTTAGCAGC > NC_000913/3770243‑3770291 CGACGAGTTTCATGCCGAGTCCTTTGTGCGATGAAAAATATCAGTATGGC > 1:2838897/1‑50CGACGAGTTTCATGCCGAGTCCTTTGTGCGAGGAAAAATATCAGTATGGC > 1:4172647/1‑50CGACGAGTTTCATGCCGAGTCCTTTGTGCGAGGAAAAATATCAGTATGGC < 1:1094868/50‑1 GACGAGTTTCATGCCGAGTCCTTTGTGCGAGGAAAAATATCAGTATGGCT > 1:80115/1‑50 GACGAGTTTCATGCCGAGTCCTTTGTGCGAGGAAAAATATCAGTATGGCT < 1:3794707/50‑1 CGAGTTTCATGCCGAGTCCTTTGTGCGAGGAAAAATATCAGTATGGCTCA < 1:252609/50‑1 CGAGTTTCATGCCGAGTCCTTTGTGCGAGGAAAAATATCAGTATGGCTCA < 1:657008/50‑1 GAGTTTCATGCCGAGTCCTTTGTGCGAGGAAAAATATCAGTATGGCTCAA < 1:3961173/50‑1 AGTTTCATGCCGAGTCCTTTGTGCGAGGAAAAATATCAGTATGGCTCAAT > 1:6345408/1‑50 AGTTTCATGCCGAGTCCTTTGTGCGAGGAAAAATATCAGTATGGCTCAAT > 1:2062711/1‑50 GTTTCATACCGAGTCCTTTGTCCGATGATAAATATCAGTATGGCTCAAT < 1:1154482/49‑1 TTTCATGCCGAGTCCTTTGTGCGAGGAAAAATATCAGTATGGCTCAATGA > 1:123231/1‑50 TCATGCCGAGTCCTTTGTGCGAGGAAAAATATCAGTATGGCTCAATGATC > 1:1353551/1‑50 TCATGCCGAGTCCTTTGTGCGAGGAAAAATATCAGTATGGCTCAATGAT < 1:3274147/49‑1 TCATGCCGAGTCCTTTGTGCGAGGAAAAATATCAGTATGGCTCAATGAT < 1:2937149/49‑1 CATGCCGAGTCCTTTGTGCGAGGAAAAATATCAGTATGGCTCAATGATC < 1:5931733/49‑1 ATGCCGAGTCCTTTGTGCGAGGAAAAATATCAGTATGGCTCAATGATCCA < 1:2340534/50‑1 ATGCCGAGTCCTTTGTGCGAGGAAAAATATCAGTATGGCTCAATGATCCA < 1:640190/50‑1 ATGCCGAGTCCTTTGTGCGAGGAAAAATATCAGTATGGCTCAATGATCC < 1:4624594/49‑1 TGCCGAGTCCTTTGTGCGAGGAAAAATATCAGTATGGCTCAATGATCCAA < 1:2976401/50‑1 TGCCGAGTCCTTTGTGCGAGGAAAAATATCAGTATGGCTCAATGATCCAA < 1:3047677/50‑1 GCCGAGTCCTTTGTGCGAGGAAAAATATCAGTATGGCTCAATGATCCAAA > 1:2122957/1‑50 CCGAGTCCTTTGTGCGAGGAAAAATATCAGTATGGCTCAATGATCCAAAT < 1:4035232/50‑1 CCGAGTCCTTTGTGCGAGGAAAAATATCAGTATGGCTCAATGATCCAAA < 1:5795408/49‑1 CCGAGTCCTTTGTGCGAGGAAAAATATCAGTATGGCTCAATGATCCAAA < 1:4429806/49‑1 CCGAGTCCTTTGTGCGAGGAAAAATATCAGTATGGCTCAATGATCCAAA > 1:4665805/1‑49 CGAGTCCTTTGTGCGAGGAAAAATATCAGTATGGCTCAATGATCCAAATA < 1:5519135/50‑1 CGAGTCCTTTGTGCGAGGAAAAATATCAGTATGGCTCAATGATCCAAAT > 1:6246046/1‑49 GAGTCCTTTGTGCGAGGAAAAATATCAGTATGGCTCAATGATCCAAATA > 1:4372432/1‑49 GAGTCCTTTGTGCGAGGAAAAATATCAGTATGGCTCAATGATCCAAATA > 1:5220763/1‑49 AGTCCTTTGTGCGAGGAAAAATATCAGTATGGCTCAATGATCCAAATAAA < 1:377993/50‑1 GTCCTTTGTGCGAGGAAAAATATCAGTATGGCTCAATGATCCAAATAAAG < 1:1770590/50‑1 CCTTTGTGCGAGGAAAAATATCAGTATGGCTCAATGATCCAAATAAAGA > 1:2777887/1‑49 CTTTGTGCGAGGAAAAATATCAGTATGGCTCAATGATCCAAATAAAGATA < 1:3529891/50‑1 CTTTGTGCGAGGAAAAATATCAGTATGGCTCAATGATCCAAATAAAGAT > 1:3560025/1‑49 CTTTGTGCGAGGAAAAATATCAGTATGGCTCAATGATCCAAATAAAGAT < 1:5614622/49‑1 TTTGTGCGAGGAAAAATATCAGTATGGCTCAATGATCCAAATAAAGATAA > 1:2128358/1‑50 TTGTGCGAGGAAAAATATCAGTATGGCTCAATGATCCAAATAAAGATAAT > 1:2730336/1‑50 TGTGCGAGGAAAAATATCAGTATGGCTCAATGATCCAAATAAAGATAATG > 1:1326364/1‑50 TGTGCGAGGAAAAATATCAGTATGGCTCAATGATCCAAATAAAGATAAT < 1:301234/49‑1 TGTGCGAGGAAAAATATCAGTATGGCTCAATGATCCAAATAAAGATAAT < 1:5375380/49‑1 TGTGCGAGGAAAAATATCAGTATGGCTCAATGATCCAAATAAAGATAA < 1:1681698/48‑1 GTGCGAGGAAAAATATCAGTATGGCTCAATGATCCAAATAAAGATAATG < 1:2769707/49‑1 GTGCGAGGAAAAATATCAGTATGGCTCAATGATCCAAATAAAGATAATG < 1:3805973/49‑1 GTGCGAGGAAAAATATCAGTATGGCTCAATGATCCAAATAAAGATAATG < 1:250114/49‑1 GTGCGAGGAAAAATATCAGTATGGCTCAATGATCCAAATAAAGATAATG < 1:6084363/49‑1 GTGCGAGGAAAAATATCAGTATGGCTCAATGATCCAAATAAAGATAATG > 1:1483531/1‑49 TGCGAGGAAAAATATCAGTATGGCTCAATGATCCAAATAAAGATAATGCA > 1:4379544/1‑50 TGCGAGGAAAAATATCAGTATGGCTCAATGATCCAAATAAAGATAATGCA > 1:6621074/1‑50 CGAGGAAAAATATCAGTATGGCTCAATGATCCAAATAAAGATAATGCATC < 1:1526710/50‑1 CGAGGAAAAATATCAGTATGGCTCAATGATCCAAATAAAGATAATGCAT < 1:5310864/49‑1 CGAGGAAAAATATCAGTATGGCTCAATGATCCAAATAAAGATAATGCAT < 1:1104481/49‑1 GAGGAAAAATATCAGTATGGCTCAATGATCCAAATAAAGATAATGCATCC < 1:3274943/50‑1 GAGGAAAAATATCAGTATGGCTCAATGATCCAAATAAAGATAATGCATCC < 1:185677/50‑1 GAGGAAAAATATCAGTATGGCTCAATGATCCAAATAAAGATAATGCATCC < 1:4044667/50‑1 GAGGAAAAATATCAGTATGGCTCAATGATCCAAATAAAGATAATGCATC > 1:1707108/1‑49 AGGAAAAATATCAGTATGGCTCAATGATCCAAATAAAGATAATGCATCCA < 1:2641075/50‑1 AGGAAAAATATCAGTATGGCTCAATGATCCAAATAAAGATAATGCATC > 1:922183/1‑48 AGGAAAAATATCAGTATGGCTCAATGATCCAAATAAAGATAATGCATC > 1:64635/1‑48 GGAAAAATATCAGTATGGCTCAATGATCCAAATAAAGATAATGCATCCAG > 1:3554523/1‑50 GGAAAAATATCAGTATGGCTCAATGATCCAAATAAAGATAATGCATCCAG < 1:5505086/50‑1 GGAAAAATATCAGTATGGCTCAATGATCCAAATAAAGATAATGCATCCAG < 1:2137637/50‑1 GGAAAAATATCAGTATGGCTCAATGATCCAAATAAAGATAATGCATCCAG < 1:1927399/50‑1 GGAAAAATATCAGTATGGCTCAATGATCCAAATAAAGATAATGCATCCAG > 1:3979506/1‑50 GAAAAATATCAGTATGGCTCAATGATCCAAATAAAGATAATGCATCCAGC > 1:4875943/1‑50 GAAAAATATCAGTATGGCTCAATGATCCAAATAAAGATAATGCATCCAGC > 1:2864263/1‑50 AAAAATATCAGTATGGCTCAATGATCCAAATAAAGATAATGCATCCAGCT < 1:3731195/50‑1 AAAATATCAGTATGGCTCAATGATCCAAATAAAGATAATGCATCCAGCTG < 1:735364/50‑1 AAAATATCAGTATGGCTCAATGATCCAAATAAAGATAATGCATCCAGCTG < 1:4524709/50‑1 AAAATATCAGTATGGCTCAATGATCCAAATAAAGATAATGCATCCAGCTG < 1:2142536/50‑1 AAAATATCAGTATGGCTCAATGATCCAAATAAAGATAATGCATCCAGCTG < 1:2296146/50‑1 AAAATATCAGTATGGCTCAATGATCCAAATAAAGATAATGCATCCAGCTG > 1:2345129/1‑50 AATATCAGTATGGCTCAATGATCCAAATAAAGATAATGCATCCAGCTGGT < 1:890207/50‑1 AATATCAGTATGGCTCAATGATCCAAATAAAGATAATGCATCCAGCTGGT < 1:31830/50‑1 ATATCAGTATGGCTCAATGATCCAAATAAAGATAATGCATCCAGCTGGTC < 1:6019706/50‑1 ATATCAGTATGGCTCAATGATCCAAATAAAGATAATGCATCCAGCTGGTC < 1:5184397/50‑1 ATATCAGTATGGCTCAATGATCCAAATAAAGATAATGCATCCAGCTGGT > 1:1357325/1‑49 TATCAGTATGGCTCAATGATCCAAATAAAGATAATGCATCCAGCTGGTCA > 1:3393269/1‑50 TATCAGTATGGCTCAATGATCCAAATAAAGATAATGCATCCAGCTGGTCA > 1:4183943/1‑50 TATCAGTATGGCTCAATGATCCAAATAAAGATAATGCATCCAGCTGGTCA < 1:3033805/50‑1 ATCAGTATGGCTCAATGATCCAAATAAAGATAATGCATCCAGCTGGTCAT > 1:3486383/1‑50 TCAGTATGGCTCAATGATCCAAATAAAGATAATGCATCCAGCTGGTCATT < 1:5360427/50‑1 TCAGTATGGCTCAATGATCCAAATAAAGATAATGCATCCAGCTGGTCAT < 1:3567200/49‑1 AGTATGGCTCAATGATCCAAATAAAGATAATGCATCCAGCTGGTCATTCT < 1:1923498/50‑1 AGTATGGCTCAATGATCCAAATAAAGATAATGCATCCAGCTGGTCATTCT > 1:6248123/1‑50 AGTATGGCTCAATGATCCAAATAAAGATAATGCATCCAGCTGGTCATTCT > 1:519208/1‑50 AGTATGGCTCAATGATCCAAATAAAGATAATGCATCCAGCTGGTCATTC < 1:6188207/49‑1 AGTATGGCTCAATGATCCAAATAAAGATAATGCATCCAGCTGGTCATTC < 1:312956/49‑1 GTATGGCTCAATGATCCAAATAAAGATAATGCATCCAGCTGGTCATTCTT < 1:4907101/50‑1 GTATGGCTCAATGATCCAAATAAAGATAATGCATCCAGCTGGTCATTCTT < 1:4467628/50‑1 GTATGGCTCAATGATCCAAATAAAGATAATGCATCCAGCTGGTCATTCT > 1:4836843/1‑49 TATGGCTCAATGATCCAAATAAAGATAATGCATCCAGCTGGTCATTCT > 1:3499135/1‑48 TATGGCTCAATGATCCAAATAAAGATAATGCATCCAGCTGGTCATTCT > 1:3713214/1‑48 TATGGCTCAATGATCCAAATAAAGACAATGCATCCAGCTGGTCATTCTTA < 1:6420558/50‑1 TGGCTCAATGATCCAAATAAAGATAATGCATCCAGCTGGTCATTCTTAG > 1:5844960/1‑49 GGCTCAATGATCCAAATAAAGATAATGCATCCAGCTGGTCATTCTTAG > 1:3976914/1‑48 GGCTCAATGATCCAAATAAAGATAATGCATCCAGCTGGTCATTCTTAG > 1:3694025/1‑48 GCTCAATGATCCAAATAAAGATAATGCATCCAGCTGGTCATTCTTAGCAG > 1:2137213/1‑50 GCTCAATGATCCAAATAAAGATAATGCATCCAGCTGGTCATTCTTAGCAG > 1:4744429/1‑50 CTCAATGATCCAAATAAAGATAATGCATCCAGCTGGTCATTCTTAGCAGC < 1:1710484/50‑1 CGACGAGTTTCATGCCGAGTCCTTTGTGCGAGGAAAAATATCAGTATGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/3761943‑3761992‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cTCAATGATCCAAATAAAGATAATGCATCCAGCTGGTCATTCTTAGCAGC > NC_000913/3770243‑3770291 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |