| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 3,761,993 | Δ8,250 bp | rhsA–yibV | rhsA, yibA, yibJ, yibG, yibS, yibV | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 3761993 | 3770242 | 8250 | 133 [0] | [0] 131 | rhsA–yibV | rhsA,yibA,yibJ,yibG,yibS,yibV |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 3761992 | 0 (0.000) | 129 (1.490) | 74/96 | 0.0 | 100% | intergenic (‑37/‑191) | yibF/rhsA | glutathione transferase‑like protein YibF/rhs element protein RhsA |
| ? | NC_000913 | 3770243 = | 0 (0.000) | coding (1137/1137 nt) | yibH | inner membrane protein YibH | |||||
Only 100 of 133 total aligned reads displayed.
CGACGAGTTTCATGCCGAGTCCTTTGTGCGAGGAAAAATATCAGTATGGCCTGGTGATGGGAAAAAGGGCAGAAAATGTTGATGGTTTGTTACTTCCAA > NC_000913/3761943‑3762041 | cgacgaGTTTCATGCCGAGTCCTTTGTGCGATGAAAAATATCAGTATGGC > 1:2838897‑M1/1‑50 (MQ=255)cgacgaGTTTCATGCCGAGTCCTTTGTGCGAGGAAAAATATCAGTATGGC > 1:4172647‑M1/1‑50 (MQ=255)cgacgaGTTTCATGCCGAGTCCTTTGTGCGAGGAAAAATATCAGTATGGC < 1:1094868‑M1/50‑1 (MQ=255) gacgaGTTTCATGCCGAGTCCTTTGTGCGAGGAAAAATATCAGTATGGCt > 1:80115‑M1/1‑49 (MQ=255) gacgaGTTTCATGCCGAGTCCTTTGTGCGAGGAAAAATATCAGTATGGCt < 1:3794707‑M1/50‑2 (MQ=255) cgaGTTTCATGCCGAGTCCTTTGTGCGAGGAAAAATATCAGTATGGCtca < 1:252609‑M1/50‑4 (MQ=255) cgaGTTTCATGCCGAGTCCTTTGTGCGAGGAAAAATATCAGTATGGCtca < 1:657008‑M1/50‑4 (MQ=255) gaGTTTCATGCCGAGTCCTTTGTGCGAGGAAAAATATCAGTATGGCtcaa < 1:3961173‑M1/50‑5 (MQ=255) aGTTTCATGCCGAGTCCTTTGTGCGAGGAAAAATATCAGTATGGCtcaat > 1:6345408‑M1/1‑45 (MQ=255) aGTTTCATGCCGAGTCCTTTGTGCGAGGAAAAATATCAGTATGGCtcaat > 1:2062711‑M1/1‑45 (MQ=255) gTTTCATACCGAGTCCTTTGTCCGATGATAAATATCAGTATGGCtcaat < 1:1154482‑M1/49‑6 (MQ=255) tttCATGCCGAGTCCTTTGTGCGAGGAAAAATATCAGTATGGCtcaatga > 1:123231‑M1/1‑43 (MQ=255) tCATGCCGAGTCCTTTGTGCGAGGAAAAATATCAGTATGGCtcaatgatc > 1:1353551‑M1/1‑41 (MQ=255) tCATGCCGAGTCCTTTGTGCGAGGAAAAATATCAGTATGGCtcaatgat < 1:3274147‑M1/49‑9 (MQ=255) tCATGCCGAGTCCTTTGTGCGAGGAAAAATATCAGTATGGCtcaatgat < 1:2937149‑M1/49‑9 (MQ=255) cATGCCGAGTCCTTTGTGCGAGGAAAAATATCAGTATGGCtcaatgatc < 1:5931733‑M1/49‑10 (MQ=255) aTGCCGAGTCCTTTGTGCGAGGAAAAATATCAGTATGGCtcaatgatcca < 1:2340534‑M1/50‑12 (MQ=255) aTGCCGAGTCCTTTGTGCGAGGAAAAATATCAGTATGGCtcaatgatcca < 1:640190‑M1/50‑12 (MQ=255) aTGCCGAGTCCTTTGTGCGAGGAAAAATATCAGTATGGCtcaatgatcc < 1:4624594‑M1/49‑11 (MQ=255) tGCCGAGTCCTTTGTGCGAGGAAAAATATCAGTATGGCtcaatgatccaa < 1:2976401‑M1/50‑13 (MQ=255) tGCCGAGTCCTTTGTGCGAGGAAAAATATCAGTATGGCtcaatgatccaa < 1:3047677‑M1/50‑13 (MQ=255) gCCGAGTCCTTTGTGCGAGGAAAAATATCAGTATGGCtcaatgatccaaa > 1:2122957‑M1/1‑37 (MQ=255) ccGAGTCCTTTGTGCGAGGAAAAATATCAGTATGGCtcaatgatccaaat < 1:4035232‑M1/50‑15 (MQ=255) ccGAGTCCTTTGTGCGAGGAAAAATATCAGTATGGCtcaatgatccaaa < 1:5795408‑M1/49‑14 (MQ=255) ccGAGTCCTTTGTGCGAGGAAAAATATCAGTATGGCtcaatgatccaaa < 1:4429806‑M1/49‑14 (MQ=255) ccGAGTCCTTTGTGCGAGGAAAAATATCAGTATGGCtcaatgatccaaa > 1:4665805‑M1/1‑36 (MQ=255) cGAGTCCTTTGTGCGAGGAAAAATATCAGTATGGCtcaatgatccaaata < 1:5519135‑M1/50‑16 (MQ=255) cGAGTCCTTTGTGCGAGGAAAAATATCAGTATGGCtcaatgatccaaat > 1:6246046‑M1/1‑35 (MQ=255) gAGTCCTTTGTGCGAGGAAAAATATCAGTATGGCtcaatgatccaaata > 1:4372432‑M1/1‑34 (MQ=255) gAGTCCTTTGTGCGAGGAAAAATATCAGTATGGCtcaatgatccaaata > 1:5220763‑M1/1‑34 (MQ=255) aGTCCTTTGTGCGAGGAAAAATATCAGTATGGCtcaatgatccaaataaa < 1:377993‑M1/50‑18 (MQ=255) gTCCTTTGTGCGAGGAAAAATATCAGTATGGCtcaatgatccaaataaag < 1:1770590‑M1/50‑19 (MQ=255) ccTTTGTGCGAGGAAAAATATCAGTATGGCtcaatgatccaaataaaga > 1:2777887‑M1/1‑30 (MQ=255) cTTTGTGCGAGGAAAAATATCAGTATGGCtcaatgatccaaataaagata < 1:3529891‑M1/50‑22 (MQ=255) cTTTGTGCGAGGAAAAATATCAGTATGGCtcaatgatccaaataaagat > 1:3560025‑M1/1‑29 (MQ=255) cTTTGTGCGAGGAAAAATATCAGTATGGCtcaatgatccaaataaagat < 1:5614622‑M1/49‑21 (MQ=255) tttGTGCGAGGAAAAATATCAGTATGGCtcaatgatccaaataaagataa > 1:2128358‑M1/1‑28 (MQ=255) ttGTGCGAGGAAAAATATCAGTATGGCtcaatgatccaaataaagataat > 1:2730336‑M1/1‑27 (MQ=255) tgtgCGAGGAAAAATATCAGTATGGCtcaatgatccaaataaagataatg > 1:1326364‑M1/1‑26 (MQ=255) tgtgCGAGGAAAAATATCAGTATGGCtcaatgatccaaataaagataat < 1:301234‑M1/49‑24 (MQ=255) tgtgCGAGGAAAAATATCAGTATGGCtcaatgatccaaataaagataat < 1:5375380‑M1/49‑24 (MQ=255) tgtgCGAGGAAAAATATCAGTATGGCtcaatgatccaaataaagataa < 1:1681698‑M1/48‑23 (MQ=255) gtgCGAGGAAAAATATCAGTATGGCtcaatgatccaaataaagataatg < 1:2769707‑M1/49‑25 (MQ=255) gtgCGAGGAAAAATATCAGTATGGCtcaatgatccaaataaagataatg < 1:3805973‑M1/49‑25 (MQ=255) gtgCGAGGAAAAATATCAGTATGGCtcaatgatccaaataaagataatg < 1:250114‑M1/49‑25 (MQ=255) gtgCGAGGAAAAATATCAGTATGGCtcaatgatccaaataaagataatg < 1:6084363‑M1/49‑25 (MQ=255) gtgCGAGGAAAAATATCAGTATGGCtcaatgatccaaataaagataatg > 1:1483531‑M1/1‑25 (MQ=255) tgCGAGGAAAAATATCAGTATGGCtcaatgatccaaataaagataatgca > 1:4379544‑M1/1‑24 (MQ=255) tgCGAGGAAAAATATCAGTATGGCtcaatgatccaaataaagataatgca > 1:6621074‑M1/1‑24 (MQ=255) cGAGGAAAAATATCAGTATGGCtcaatgatccaaataaagataatgcatc < 1:1526710‑M1/50‑29 (MQ=255) cGAGGAAAAATATCAGTATGGCtcaatgatccaaataaagataatgcat < 1:5310864‑M1/49‑28 (MQ=255) cGAGGAAAAATATCAGTATGGCtcaatgatccaaataaagataatgcat < 1:1104481‑M1/49‑28 (MQ=255) gAGGAAAAATATCAGTATGGCtcaatgatccaaataaagataatgcatcc < 1:3274943‑M1/50‑30 (MQ=255) gAGGAAAAATATCAGTATGGCtcaatgatccaaataaagataatgcatcc < 1:185677‑M1/50‑30 (MQ=255) gAGGAAAAATATCAGTATGGCtcaatgatccaaataaagataatgcatcc < 1:4044667‑M1/50‑30 (MQ=255) gAGGAAAAATATCAGTATGGCtcaatgatccaaataaagataatgcatc > 1:1707108‑M1/1‑21 (MQ=255) aGGAAAAATATCAGTATGGCtcaatgatccaaataaagataatgcatcca < 1:2641075‑M1/50‑31 (MQ=255) aGGAAAAATATCAGTATGGCtcaatgatccaaataaagataatgcatc > 1:922183‑M1/1‑20 (MQ=255) aGGAAAAATATCAGTATGGCtcaatgatccaaataaagataatgcatc > 1:64635‑M1/1‑20 (MQ=255) ggAAAAATATCAGTATGGCtcaatgatccaaataaagataatgcatccag > 1:3554523‑M1/1‑19 (MQ=255) ggAAAAATATCAGTATGGCtcaatgatccaaataaagataatgcatccag < 1:5505086‑M1/50‑32 (MQ=255) ggAAAAATATCAGTATGGCtcaatgatccaaataaagataatgcatccag < 1:2137637‑M1/50‑32 (MQ=255) ggAAAAATATCAGTATGGCtcaatgatccaaataaagataatgcatccag < 1:1927399‑M1/50‑32 (MQ=255) ggAAAAATATCAGTATGGCtcaatgatccaaataaagataatgcatccag > 1:3979506‑M1/1‑19 (MQ=255) gAAAAATATCAGTATGGCtcaatgatccaaataaagataatgcatccagc > 1:4875943‑M1/1‑18 (MQ=255) gAAAAATATCAGTATGGCtcaatgatccaaataaagataatgcatccagc > 1:2864263‑M1/1‑18 (MQ=255) aaaaaTATCAGTATGGCtcaatgatccaaataaagataatgcatccagct < 1:3731195‑M1/50‑34 (MQ=255) aaaaTATCAGTATGGCtcaatgatccaaataaagataatgcatccagctg < 1:735364‑M1/50‑35 (MQ=255) aaaaTATCAGTATGGCtcaatgatccaaataaagataatgcatccagctg < 1:4524709‑M1/50‑35 (MQ=255) aaaaTATCAGTATGGCtcaatgatccaaataaagataatgcatccagctg < 1:2142536‑M1/50‑35 (MQ=255) aaaaTATCAGTATGGCtcaatgatccaaataaagataatgcatccagctg < 1:2296146‑M1/50‑35 (MQ=255) aaaaTATCAGTATGGCtcaatgatccaaataaagataatgcatccagctg > 1:2345129‑M1/1‑16 (MQ=255) aaTATCAGTATGGCtcaatgatccaaataaagataatgcatccagctggt < 1:890207‑M1/50‑37 (MQ=255) aaTATCAGTATGGCtcaatgatccaaataaagataatgcatccagctggt < 1:31830‑M1/50‑37 (MQ=255) atatCAGTATGGCtcaatgatccaaataaagataatgcatccagctggtc < 1:6019706‑M1/50‑38 (MQ=255) atatCAGTATGGCtcaatgatccaaataaagataatgcatccagctggtc < 1:5184397‑M1/50‑38 (MQ=255) atatCAGTATGGCtcaatgatccaaataaagataatgcatccagctggt > 1:1357325‑M1/1‑13 (MQ=255) tatCAGTATGGCtcaatgatccaaataaagataatgcatccagctggtca > 1:3393269‑M1/1‑12 (MQ=255) tatCAGTATGGCtcaatgatccaaataaagataatgcatccagctggtca > 1:4183943‑M1/1‑12 (MQ=255) tatCAGTATGGCtcaatgatccaaataaagataatgcatccagctggtca < 1:3033805‑M1/50‑39 (MQ=255) atCAGTATGGCtcaatgatccaaataaagataatgcatccagctggtcat > 1:3486383‑M1/1‑11 (MQ=255) tCAGTATGGCtcaatgatccaaataaagataatgcatccagctggtcatt < 1:5360427‑M1/50‑41 (MQ=255) tCAGTATGGCtcaatgatccaaataaagataatgcatccagctggtcat < 1:3567200‑M1/49‑40 (MQ=255) aGTATGGCtcaatgatccaaataaagataatgcatccagctggtcattct < 1:1923498‑M1/50‑43 (MQ=255) aGTATGGCtcaatgatccaaataaagataatgcatccagctggtcattct > 1:6248123‑M1/1‑8 (MQ=255) aGTATGGCtcaatgatccaaataaagataatgcatccagctggtcattct > 1:519208‑M1/1‑8 (MQ=255) aGTATGGCtcaatgatccaaataaagataatgcatccagctggtcattc < 1:6188207‑M1/49‑42 (MQ=255) aGTATGGCtcaatgatccaaataaagataatgcatccagctggtcattc < 1:312956‑M1/49‑42 (MQ=255) gTATGGCtcaatgatccaaataaagataatgcatccagctggtcattctt < 1:4907101‑M1/50‑44 (MQ=255) gTATGGCtcaatgatccaaataaagataatgcatccagctggtcattctt < 1:4467628‑M1/50‑44 (MQ=255) gTATGGCtcaatgatccaaataaagataatgcatccagctggtcattct > 1:4836843‑M1/1‑7 (MQ=255) tATGGCtcaatgatccaaataaagataatgcatccagctggtcattct > 1:3499135‑M1/1‑6 (MQ=255) tATGGCtcaatgatccaaataaagataatgcatccagctggtcattct > 1:3713214‑M1/1‑6 (MQ=255) tATGGCtcaatgatccaaataaagacaatgcatccagctggtcattctta < 1:6420558‑M1/50‑45 (MQ=255) tGGCtcaatgatccaaataaagataatgcatccagctggtcattcttag > 1:5844960‑M1/1‑4 (MQ=255) ggCtcaatgatccaaataaagataatgcatccagctggtcattcttag > 1:3976914‑M1/1‑3 (MQ=255) ggCtcaatgatccaaataaagataatgcatccagctggtcattcttag > 1:3694025‑M1/1‑3 (MQ=255) gCtcaatgatccaaataaagataatgcatccagctggtcattcttagcag > 1:2137213‑M1/1‑2 (MQ=255) gCtcaatgatccaaataaagataatgcatccagctggtcattcttagcag > 1:4744429‑M1/1‑2 (MQ=255) ctcaatgatccaaataaagataatgcatccagctggtcattcttagcagc < 1:1710484‑M1/50‑50 (MQ=255) | CGACGAGTTTCATGCCGAGTCCTTTGTGCGAGGAAAAATATCAGTATGGCCTGGTGATGGGAAAAAGGGCAGAAAATGTTGATGGTTTGTTACTTCCAA > NC_000913/3761943‑3762041 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |