| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 380111 | 0 (0.000) | 42 (0.820) +CGAGATGGACG |
30/76 | 0.1 | 62.3% | coding (732/774 nt) | yaiO | outer membrane protein YaiO |
| ? | NC_000913 | 624576 = | 66 (0.990) | intergenic (‑66/‑309) | fepB/entC | ferric enterobactin ABC transporter periplasmic binding protein/isochorismate synthase EntC | |||||
AAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/380063‑380111‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAGGG > NC_000913/624576‑624613 ||||||||||| AAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTAC > 1:4650711/1‑50AAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTAC > 1:2152024/1‑50 GAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTACGAG < 1:2558198/50‑1 GAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTAC > 1:660352/1‑47 ATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTACGAGAT > 1:2013245/1‑50 CAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTACGAGATG > 1:1981624/1‑49 AGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTACGAGATGG < 1:2614207/49‑1 GAAATTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTACGAGATGGAC < 1:4882264/50‑1 AATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTACGAGATGGACG < 1:2079436/50‑1 TCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTACGAGATGGACGGTCC > 1:2971125/1‑50 CCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTACGAGATGGACGGTCCC > 1:4852750/1‑50 CCAGGTCAGACGGGATGCAAGTTGCAGACCGTTACGAGATGGACGGTCC < 1:1748792/49‑1 CAGGTCAGACGGGCTGCAAGTTGCAGACCGTTACGAGATGGACGGTCCCC > 1:656193/1‑50 CAGGTCAGACGGGCTGCAAGTTGCAGACCGTTACGAGATGGACGGTCCCC > 1:459393/1‑50 CAGGTCAGACGGGCTGCAAGTTGCAGACCGTTACGAGATGGACGGTCCC < 1:2925142/49‑1 AGGTCAGACGGGCTGCAAGTTGCAGACCGTTACGAGATGGACGGTCCCCT < 1:589801/50‑1 AGGTCAGACGGGCTGCAAGTTGCAGACCGTTACGAGATGGACGGTCCCCT > 1:2411120/1‑50 GGTCAGACGGGCTGCAAGTTGCAGACCGTTACGAGATGGACGGTCCCCTC > 1:3693775/1‑50 GGTCAGACGGGCTGCAAGTTGCAGACCGTTACGAGATGGACGGTCCCCTC < 1:2569992/50‑1 GGTCAGACGGGCTGCAAGTTGCAGACCGTTACGAGATGGACGGTCCCCTC < 1:1247539/50‑1 GGTCAGACGGGCTGCAAGTTGCAGACCGTTACGAGATGGACGGTCACCTC < 1:4159381/50‑1 GTCAGACGGGCTGCAAGTTGCAGACCGTTACGAGATGGACGGTCCCCTCG < 1:4643690/50‑1 TCAGACGGGCTGCAAGTTGCAGACCGTTACGAGATGGACGGTCCCCTCGC < 1:959711/50‑1 ACGGGCTGCAAGTTGCAGACCGTTACGAGATGGACGGTCCCCTCGCCCCc > 1:3646529/1‑49 CGGGCTGCAAGTTGCAGACCGTTACGAGATGGACGGTCCCCTCGCCCCct < 1:2589957/50‑3 GGGCTGCAAGTTGCAGACCGTTACGAGATGGACGGTCCCCTCGCCCCCTT < 1:2959831/50‑1 GGGCTGCAAGTTGCAGACCGTTACGAGATGGACGGTCCCCTCGCCCCCTT < 1:316227/50‑1 GGGCTGCAAGTTGCAGACCGTTACGAGATGGACGGTCCCCTCGCCCCCTT < 1:3197747/50‑1 GGGCTGCAAGTTGCAGACCGTTACGAGATGGACGGTCCCCTCGCCCCCTT < 1:4008960/50‑1 CTGCAAGTTGCAGACCGTTACGAGATGGACGGTCCCCTCGCCCCCTTGGG > 1:2869362/1‑50 CTGCAAGTTGCAGACCGTTACGAGATGGACGGTCCCCTCGCCCCCTTGGG > 1:421399/1‑50 GCAAGTTGCAGACCGTTACGAGATGGACGGTCCCCTCGCTCCCTTGGG > 1:1276585/1‑48 CAAGTTGCAGACCGTTACGAGATGGACGGTCCCCTCGCCCCCTTGGGG < 1:1151291/48‑1 CAAGTTGCAGACCGTTACGAGATGGACGGTCCCCTCGCCCCCTTGGG > 1:646404/1‑47 AAGGTGCAGGCCGTTACGAGATGGGCGGTCCCCTCGCCCCCTTGGGGAGA < 1:3109869/50‑1 AGTTGCAGACCGTTACGAGATGGACGGTCCCCTCGCCCCCTTGGGGAGAG < 1:1105180/50‑1 AGTTGCAGACCGTTACGAGATGGACGGTCCCCTCGCCCCCTTGGGGAGAG > 1:3022331/1‑50 GTTGCAGACCGTTACGAGATGGACGGTCCCCTCGCCCCCTTTGGGAGAGG < 1:3576686/50‑1 TTGCAGACCGTTACGAGATGGACGGTCCCCTCGCCCCCTTGGGGAGAGGG > 1:3467844/1‑50 TTGCAGACCGTTACGAGATGGACGGTCCCCTCGCCCCCTTGGGGAGAGGG > 1:4322755/1‑50 CAGACCGTTACGAGATGGACGGTCCCCTCGCCCCCTTGGGGAGAGGGTT < 1:220613/49‑1 AGACCGTTACGAGATGGACGGTCCCCTCGCCCCCTTGGGGAGAGGGTTAG > 1:1743257/1‑50 ACCGTTACGAGATGGACGGTCCCCTCGCCCCCTTGGGGAGAGGGTTAGGG > 1:428282/1‑50 CCGTTACGAGATGGACGGTCCCCTCGCCCCCTTGGGGAGAGGGTTAGGGT < 1:4645524/50‑1 CGTTACGAGATGGACGGTCCCCTCGCCCCCTTGGGGAGAGGGTTAGGGTG < 1:917510/50‑1 TTACGAGATGGACGGTCCCCTCGCCCCCTTGGGGAGAGGGTTAGGGTGAG < 1:1770394/50‑1 TTACGAGATGGACGGTCCCCTCGCCCCCTTGGGGAGAGGGTTAGGGTGAG < 1:1315182/50‑1 TTACGAGATGGACGGTCCCCTCGCCCCCTTGGGGAGAGGGTTAGGGTGAG < 1:1170661/50‑1 TTACGAGATGGACGGTCCCCTCGCCCCCTTGGGGAGAGGGTTAGGGTGAG > 1:708781/1‑50 TACGAGATGGACGGTCCCCTCGCCCCCTTGGGGAGAGGGTTAGGGTGAGG > 1:2180369/1‑50 ACGAGATGGACGGTCCCCTCGCCCCCTTGGGGAGAGGGTTAGGGTGAGGG > 1:3160509/1‑50 ||||||||||| AAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/380063‑380111‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAGGG > NC_000913/624576‑624613 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |