| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 167,484 | Δ5,964 bp | [fhuA]–fhuB | [fhuA], fhuC, fhuD, fhuB | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 167484 | 173447 | 5964 | 117 [0] | [0] 117 | [fhuA]–fhuB | [fhuA],fhuC,fhuD,fhuB |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 167483 | 0 (0.000) | 115 (1.180) | 66/98 | 0.0 | 100% | intergenic (+219/‑1) | mrcB/fhuA | peptidoglycan glycosyltransferase/peptidoglycan DD‑transpeptidase MrcB/ferrichrome outer membrane transporter/phage receptor |
| ? | NC_000913 | 173448 = | 0 (0.000) | intergenic (+4/+154) | fhuB/hemL | iron(III) hydroxamate ABC transporter membrane subunit/glutamate‑1‑semialdehyde aminotransferase | |||||
Only 100 of 115 total aligned reads displayed.
TAATCATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/167435‑167483‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCGA > NC_000913/173448‑173495 TAATCATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCAT < 1:5350362/50‑1TAATCATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCAT < 1:1350826/50‑1TAATCATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCAT < 1:2760511/50‑1 AATCATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCATT > 1:1572800/1‑50 ATCATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCATTC > 1:4694655/1‑50 ATCATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCATTC < 1:5884232/50‑1 ATCATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCATTC > 1:7293765/1‑50 ATCATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCATTC < 1:20084/50‑1 ATCATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCATT < 1:4462273/49‑1 ATCATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCATT < 1:6591288/49‑1 TCATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCC < 1:5824728/50‑1 TCATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCC < 1:4562140/50‑1 TCATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCC < 1:1324221/50‑1 CATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCA > 1:1965735/1‑50 ATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCAT < 1:7086572/50‑1 ATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCA < 1:1723991/49‑1 ATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATACACCATTCCA < 1:6033335/49‑1 TTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATA > 1:7127090/1‑50 TTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATA > 1:7386767/1‑50 CTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATAT < 1:7202462/49‑1 CTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATAT < 1:6579439/49‑1 CTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATAT < 1:356665/49‑1 GTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATATAACG > 1:6556294/1‑50 GTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATATAACG < 1:3948798/50‑1 GTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATATAACG > 1:2769757/1‑50 GTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATATAAC < 1:1828341/49‑1 GTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATATAA < 1:5624047/48‑1 GTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATATAA < 1:4930543/48‑1 GTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATATAA < 1:3869634/48‑1 GTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATATA < 1:3136157/47‑1 TTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATATAACGG > 1:5581701/1‑50 TTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATATAACGG > 1:6458736/1‑50 TTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATATAACGG < 1:5343362/50‑1 TTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATATAACGG < 1:5198547/50‑1 TTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATATAACGG < 1:478845/50‑1 TACGTTATCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCC > 1:2364358/1‑50 TACGTTATCATTCACTTTACATCAGAGATATACCATTCCATATAACGGC < 1:6973258/49‑1 ACGTTATCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCC < 1:4731302/49‑1 CGTTATCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCT < 1:1317707/50‑1 CGTTATCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCC < 1:735191/49‑1 CGTTATCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCC < 1:12130/49‑1 GTTATCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTG > 1:1523490/1‑50 GTTATCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTG < 1:2873839/50‑1 TTATCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTGT < 1:4849050/50‑1 TTATCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTG > 1:3972328/1‑49 ATCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTAC > 1:5507460/1‑50 ATCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTA < 1:4632556/49‑1 ATCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTA < 1:1162987/49‑1 ATCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTA < 1:1906374/49‑1 TCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTAC < 1:6099283/49‑1 TCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTAC < 1:5373557/49‑1 TCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTAC < 1:6256154/49‑1 TCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTAC < 1:1935479/49‑1 TCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTAC < 1:3635951/49‑1 CATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTACGC > 1:4498014/1‑50 ATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTACGCC > 1:2427077/1‑50 ATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTACGCC > 1:2243590/1‑50 ATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTACGCC < 1:6502583/50‑1 TTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCT < 1:6997900/50‑1 TTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCT < 1:3797679/50‑1 TTCACTTTACATAAGAGATATACCATTCCATATAACGGCCCTGTACGCCT > 1:714757/1‑50 CACTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTG < 1:1567403/49‑1 ACTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGA > 1:3645637/1‑50 ACTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGA > 1:5508730/1‑50 ACTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGG < 1:6564977/49‑1 CTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGAC < 1:3403280/50‑1 CTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGAC < 1:4752101/50‑1 TTTACATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACG > 1:2100389/1‑50 TTTACATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTAGACG > 1:4079727/1‑50 TTACATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACG > 1:1816030/1‑49 TTACATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACG > 1:2343904/1‑49 TTACATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACG > 1:3709310/1‑49 TTACATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACG > 1:482467/1‑49 TACATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGA > 1:1546718/1‑50 TACATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACG < 1:1018435/48‑1 TACATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACG < 1:2287135/48‑1 TACATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACG < 1:2197272/48‑1 ACATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGA < 1:583371/49‑1 ACATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGA < 1:6474455/49‑1 ACATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGA > 1:236034/1‑49 AGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGC < 1:3261063/50‑1 AGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGC > 1:6496904/1‑50 AGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGC > 1:4896302/1‑50 AGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAG < 1:6140764/49‑1 AGATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGT < 1:5372860/50‑1 GATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTT > 1:5864466/1‑50 GATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTT < 1:3479955/50‑1 ATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAACGCGTT > 1:5332088/1‑49 TATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTA < 1:828040/50‑1 TATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTA > 1:7130934/1‑50 TATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTA > 1:6023704/1‑50 TATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTA < 1:3286965/50‑1 TACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACG > 1:4913706/1‑50 TACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACG < 1:2038152/50‑1 TACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTAC < 1:3142382/49‑1 TACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTAC < 1:6311412/49‑1 CCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGC > 1:5312890/1‑49 ATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCGA > 1:3705502/1‑49 ATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCGA > 1:2827305/1‑49 ATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCGA > 1:1380407/1‑49 TAATCATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/167435‑167483‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCGA > NC_000913/173448‑173495 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |