| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 167,484 | Δ5,964 bp | [fhuA]–fhuB | [fhuA], fhuC, fhuD, fhuB | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 167484 | 173447 | 5964 | 117 [0] | [0] 117 | [fhuA]–fhuB | [fhuA],fhuC,fhuD,fhuB |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 167483 | 0 (0.000) | 115 (1.180) | 66/98 | 0.0 | 100% | intergenic (+219/‑1) | mrcB/fhuA | peptidoglycan glycosyltransferase/peptidoglycan DD‑transpeptidase MrcB/ferrichrome outer membrane transporter/phage receptor |
| ? | NC_000913 | 173448 = | 0 (0.000) | intergenic (+4/+154) | fhuB/hemL | iron(III) hydroxamate ABC transporter membrane subunit/glutamate‑1‑semialdehyde aminotransferase | |||||
Only 100 of 117 total aligned reads displayed.
CGGCGCGCCATATTTTATCTATTTGTTGAGAAAGCAGAGCCGTTAATTTTTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCGACA > NC_000913/173399‑173497 | taatcattctcgtttacgttatcattcactttacatcagagatataccat < 1:2760511‑M2/1‑1 (MQ=255)taatcattctcgtttacgttatcattcactttacatcagagatataccat < 1:1350826‑M2/1‑1 (MQ=255)taatcattctcggttacgttatcattcactttacatcagagatataccat < 1:3663412‑M2/1‑1 (MQ=255) aatcattctcgtttacgttatcattcactttacatcagagatataccatt > 1:1572800‑M2/49‑50 (MQ=255) atcattctcgtttacgttatcattcactttacatcagagatataccatt < 1:4462273‑M2/2‑1 (MQ=255) atcattctcgtttacgttatcattcactttacatcagagatataccaTTc > 1:4694655‑M2/48‑50 (MQ=255) atcattctcgtttacgttatcattcactttacatcagagatataccaTTc > 1:7293765‑M2/48‑50 (MQ=255) atcattctcgtttacgttatcattcactttacatcagagatataccaTTc < 1:5884232‑M2/3‑1 (MQ=255) atcattctcgtttacgttatcattcactttacatcagagatataccaTTc < 1:20084‑M2/3‑1 (MQ=255) tcattctcgtttacgttatcattcactttacatcagagatataccaTTcc < 1:1324221‑M2/4‑1 (MQ=255) tcattctcgtttacgttatcattcactttacatcagagatataccaTTcc < 1:4562140‑M2/4‑1 (MQ=255) tcattctcgtttacgttatcattcactttacatcagagatataccaTTcc < 1:5824728‑M2/4‑1 (MQ=255) cattctcgtttacgttatcattcactttacatcagagatataccaTTCCa > 1:3279415‑M2/46‑50 (MQ=255) cattctcgtttacgttatcattcactttacatcagagatataccaTTCCa > 1:5864853‑M2/46‑50 (MQ=255) cattctcgtttacgttatcattcactttacatcagagatataccaTTCCa > 1:1965735‑M2/46‑50 (MQ=255) attctcgtttacgttatcattcactttacatcagagatataccaTTCCat < 1:7086572‑M2/6‑1 (MQ=255) attctcgtttacgttatcattcactttacatcagagatataccaTTCCa < 1:1723991‑M2/5‑1 (MQ=255) ttctcgtttacgttatcattcactttacatcagagatataccaTTCCata > 1:7386767‑M2/44‑50 (MQ=255) ttctcgtttacgttatcattcactttacatcagagatataccaTTCCata > 1:7127090‑M2/44‑50 (MQ=255) ctcgtttacgttatcattcactttacatcagagatataccaTTCCatat < 1:6579439‑M2/8‑1 (MQ=255) ctcgtttacgttatcattcactttacatcagagatataccaTTCCatat < 1:356665‑M2/8‑1 (MQ=255) ctcgtttacgttatcattcactttacatcagagatataccaTTCCatat < 1:7202462‑M2/8‑1 (MQ=255) cgtttacgttatcattcactttacatcagagatataccaTTCCATATAAc > 1:5030817‑M2/40‑50 (MQ=255) gtttacgttatcattcactttacatcagagatataccaTTCCAtata < 1:3136157‑M2/9‑1 (MQ=255) gtttacgttatcattcactttacatcagagatataccaTTCCATATaa < 1:3869634‑M2/10‑1 (MQ=255) gtttacgttatcattcactttacatcagagatataccaTTCCATATaa < 1:4930543‑M2/10‑1 (MQ=255) gtttacgttatcattcactttacatcagagatataccaTTCCATATAAc < 1:1828341‑M2/11‑1 (MQ=255) gtttacgttatcattcactttacatcagagatataccaTTCCATATAACg < 1:3948798‑M2/12‑1 (MQ=255) gtttacgttatcattcactttacatcagagatataccaTTCCATATAACg > 1:6556294‑M2/39‑50 (MQ=255) gtttacgttatcattcactttacatcagagatataccaTTCCATATAACg > 1:2769757‑M2/39‑50 (MQ=255) tttacgttatcattcactttacatcagagatataccaTTCCATATAACgg < 1:478845‑M2/13‑1 (MQ=255) tttacgttatcattcactttacatcagagatataccaTTCCATATAACgg > 1:6458736‑M2/38‑50 (MQ=255) tttacgttatcattcactttacatcagagatataccaTTCCATATAACgg > 1:5581701‑M2/38‑50 (MQ=255) tttacgttatcattcactttacatcagagatataccaTTCCATATAACgg < 1:5198547‑M2/13‑1 (MQ=255) tttacgttatcattcactttacatcagagatataccaTTCCATATAACgg < 1:5343362‑M2/13‑1 (MQ=255) tacgttatcattcactttacatcagagatataccaTTCCATATAACGGcc > 1:2364358‑M2/36‑50 (MQ=255) tacgttatcattcactttacatcagagatataccaTTCCATATAACGGc < 1:6973258‑M2/14‑1 (MQ=255) acgttatcattcactttacatcagagatataccaTTCCATATAACGGccc > 1:5469047‑M2/35‑50 (MQ=255) cgttatcattcactttacatcagagatataccaTTCCATATAACGGccc < 1:735191‑M2/16‑1 (MQ=255) cgttatcattcactttacatcagagatataccaTTCCATATAACGGccc < 1:12130‑M2/16‑1 (MQ=255) cgttatcattcactttacatcagagatataccaTTCCATATAACGGCCCt < 1:1317707‑M2/17‑1 (MQ=255) gttatcattcactttacatcagagatataccaTTCCATATAACGGCCCTg > 1:1523490‑M2/33‑50 (MQ=255) ttatcattcactttacatcagagatataccaTTCCATATAACGGCCCTg > 1:3972328‑M2/32‑49 (MQ=255) ttatcattcactttacatcagagatataccaTTCCATATAACGGCCCTGt < 1:4849050‑M2/19‑1 (MQ=255) atcattcactttacatcagagatataccaTTCCATATAACGGCCCTGTa < 1:4632556‑M2/20‑1 (MQ=255) atcattcactttacatcagagatataccaTTCCATATAACGGCCCTGTa < 1:1162987‑M2/20‑1 (MQ=255) atcattcactttacatcagagatataccaTTCCATATAACGGCCCTGTa < 1:1906374‑M2/20‑1 (MQ=255) atcattcactttacatcagagatataccaTTCCATATAACGGCCCTGTAc > 1:5507460‑M2/30‑50 (MQ=255) tcattcactttacatcagagatataccaTTCCATATAACGGCCCTGTAc < 1:5373557‑M2/21‑1 (MQ=255) tcattcactttacatcagagatataccaTTCCATATAACGGCCCTGTAc < 1:6279886‑M2/21‑1 (MQ=255) tcattcactttacatcagagatataccaTTCCATATAACGGCCCTGTAc < 1:1935479‑M2/21‑1 (MQ=255) tcattcactttacatcagagatataccaTTCCATATAACGGCCCTGTAc < 1:3635951‑M2/21‑1 (MQ=255) tcattcactttacatcagagatataccaTTCCATATAACGGCCCTGTAc < 1:6256154‑M2/21‑1 (MQ=255) tcattcactttacatcagagatataccaTTCCATATAACGGCCCTGTAc < 1:6099283‑M2/21‑1 (MQ=255) cattcactttacatcagagatataccaTTCCATATAACGGCCCTGTACGc > 1:4498014‑M2/28‑50 (MQ=255) attcactttacatcagagatataccaTTCCATATAACGGCCCTGTACGcc < 1:6502583‑M2/24‑1 (MQ=255) attcactttacatcagagatataccaTTCCATATAACGGCCCTGTACGcc > 1:2427077‑M2/27‑50 (MQ=255) attcactttacatcagagatataccaTTCCATATAACGGCCCTGTACGcc > 1:2243590‑M2/27‑50 (MQ=255) ttcactttacatcagagatataccaTTCCATATAACGGCCCTGTACGCCt < 1:3797679‑M2/25‑1 (MQ=255) ttcactttacatcagagatataccaTTCCATATAACGGCCCTGTACGCCt < 1:6997900‑M2/25‑1 (MQ=255) cactttacatcagagatataccaTTCCATATAACGGCCCTGTACGCCTg < 1:1567403‑M2/26‑1 (MQ=255) actttacatcagagatataccaTTCCATATAACGGCCCTGTACGCCTgg < 1:6564977‑M2/27‑1 (MQ=255) actttacatcagagatataccaTTCCATATAACGGCCCTGTACGCCTGGa > 1:3645637‑M2/23‑50 (MQ=255) actttacatcagagatataccaTTCCATATAACGGCCCTGTACGCCTGGa > 1:5508730‑M2/23‑50 (MQ=255) ctttacatcagagatataccaTTCCATATAACGGCCCTGTACGCCTGGAc < 1:3403280‑M2/29‑1 (MQ=255) ctttacatcagagatataccaTTCCATATAACGGCCCTGTACGCCTGGAc < 1:4752101‑M2/29‑1 (MQ=255) tttacatcagagatataccaTTCCATATAACGGCCCTGTACGCCTGGACg > 1:2100389‑M2/21‑50 (MQ=255) tttacatcagagatataccaTTCCATATAACGGCCCTGTACGCCTAGACg > 1:4079727‑M2/21‑50 (MQ=255) ttacatcagagatataccaTTCCATATAACGGCCCTGTACGCCTGGACg > 1:2343904‑M2/20‑49 (MQ=255) ttacatcagagatataccaTTCCATATAACGGCCCTGTACGCCTGGACg > 1:482467‑M2/20‑49 (MQ=255) tacatcagagatataccaTTCCATATAACGGCCCTGTACGCCTGGACg < 1:2287135‑M2/30‑1 (MQ=255) tacatcagagatataccaTTCCATATAACGGCCCTGTACGCCTGGACg < 1:1018435‑M2/30‑1 (MQ=255) tacatcagagatataccaTTCCATATAACGGCCCTGTACGCCTGGACg < 1:2197272‑M2/30‑1 (MQ=255) tacatcagagatataccaTTCCATATAACGGCCCTGTACGCCTGGACGGa > 1:1546718‑M2/19‑50 (MQ=255) acatcagagatataccaTTCCATATAACGGCCCTGTACGCCTGGACGGa < 1:583371‑M2/32‑1 (MQ=255) catcagagatataccaTTCCATATAACGGCCCTGTACGCCTGGACGGAt > 1:7140532‑M2/17‑49 (MQ=255) atcagagatataccaTTCCATATAACGGCCCTGTACGCCTGGACGGATaa < 1:249742‑M2/35‑1 (MQ=255) tcagagatataccaTTCCATATAACGGCCCTGTACGCCTGGACGGATaaa < 1:657381‑M2/36‑1 (MQ=255) agagatataccaTTCCATATAACGGCCCTGTACGCCTGGACGGATAAAg < 1:6140764‑M2/37‑1 (MQ=255) agagatataccaTTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGc < 1:3261063‑M2/38‑1 (MQ=255) agagatataccaTTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGc > 1:4896302‑M2/13‑50 (MQ=255) agagatataccaTTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGc > 1:1436312‑M2/13‑50 (MQ=255) agagatataccaTTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGc > 1:6496904‑M2/13‑50 (MQ=255) agatataccaTTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGt < 1:5372860‑M2/40‑1 (MQ=255) gatataccaTTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGtt > 1:5864466‑M2/10‑50 (MQ=255) atataccaTTCCATATAACGGCCCTGTACGCCTGGACGGATAACGCGtt > 1:5332088‑M2/9‑49 (MQ=255) atataccaTTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGttt < 1:4785356‑M2/42‑1 (MQ=255) tataccaTTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTa > 1:6023704‑M2/8‑50 (MQ=255) tataccaTTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTa > 1:7130934‑M2/8‑50 (MQ=255) tataccaTTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTa < 1:3286965‑M2/43‑1 (MQ=255) tataccaTTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTa < 1:828040‑M2/43‑1 (MQ=255) taccaTTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTAc < 1:6311412‑M2/44‑1 (MQ=255) taccaTTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTAc < 1:3142382‑M2/44‑1 (MQ=255) accaTTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTAcgc > 1:2178389‑M2/5‑50 (MQ=255) ccaTTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTAcgc > 1:5312890‑M2/4‑49 (MQ=255) ccaTTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTAcgc > 1:1872078‑M2/4‑49 (MQ=255) aTTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCGa > 1:2827305‑M2/2‑49 (MQ=255) aTTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCGa > 1:3705502‑M2/2‑49 (MQ=255) ttCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCGAc > 1:3793509/1‑49 (MQ=255) ttCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCGACa < 1:3612376/50‑1 (MQ=255) | CGGCGCGCCATATTTTATCTATTTGTTGAGAAAGCAGAGCCGTTAATTTTTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCGACA > NC_000913/173399‑173497 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |