| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 729,365 | Δ9,598 bp | rhsC–ybfD | rhsC, ybfB, ybfO, ybfC, ybfQ, ybfL, ybfD | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 729365 | 738962 | 9598 | 109 [0] | [0] 106 | rhsC–ybfD | rhsC,ybfB,ybfO,ybfC,ybfQ,ybfL,ybfD |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 729364 | 0 (0.000) | 98 (1.050) | 62/94 | 0.0 | 100% | intergenic (+24/‑219) | ybfA/rhsC | DUF2517 domain‑containing protein YbfA/rhs element protein RhsC |
| ? | NC_000913 | 738963 = | 0 (0.000) | intergenic (+110/‑38) | ybfD/ybgA | H repeat‑associated putative transposase YbfD/DUF1722 domain‑containing protein YbgA | |||||
Only 100 of 106 total aligned reads displayed.
AAATTTGTCCTGCTACAACAGGATTAACTTCACAAATATCATTTCTCAACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGAATCTACA > NC_000913/738914‑739011 | aaaggcaactggtgatttttattgattgctgagttttgaatacattgaac > 1:4968103‑M2/50‑50 (MQ=255)aaaggcaactggtgatttttattgattgctgagttttgaatacattgaac > 1:931287‑M2/50‑50 (MQ=255) aaggcaactggtgatttttattgattgctgagttttgaatacattgaaCg > 1:7172572‑M2/49‑50 (MQ=255) aaggcaactggtgatttttattgattgctgagttttgaatacattgaaCg > 1:684464‑M2/49‑50 (MQ=255) aggcaactggtgatttttattgattgctgagttttgaatacattgaaCGt > 1:2394183‑M2/48‑50 (MQ=255) ggcaactggtgatttttattgattgctgagttttgaatacattgaaCGTc < 1:7125577‑M2/4‑1 (MQ=255) ggcaactggtgatttttattgattgctgagttttgaatacattgaaCGTc > 1:7014014‑M2/47‑50 (MQ=255) ggcaactggtgatttttattgattgctgagttttgaatacattgaaCGTc < 1:4412581‑M2/4‑1 (MQ=255) ggcaactggtgatttttattgattgctgagttttgaatacattgaaCGTc > 1:6334448‑M2/47‑50 (MQ=255) gcaactggtgatttttattgattgctgagttttgaatacattgaaCGTc > 1:2203938‑M2/46‑49 (MQ=255) gcaactggtgatttttattgattgctgagttttgaatacattgaaCGTCt < 1:3357022‑M2/5‑1 (MQ=255) caactggtgatttttattgattgctgagttttgaatacattgaaCGTCTa > 1:2313181‑M2/45‑50 (MQ=255) caactggtgatttttattgattgctgagttttgaatacattgaaCGTCTa < 1:139523‑M2/6‑1 (MQ=255) aactggtgatttttattgattgctgagttttgaatacattgaaCGTCTac < 1:6967228‑M2/7‑1 (MQ=255) aactggtgatttttattgattgctgagttttgaatacattgaaCGTCTa > 1:7279033‑M2/44‑49 (MQ=255) aactggtgatttttattgattgctgagttttgaatacattgaaCGTCTa > 1:7232160‑M2/44‑49 (MQ=255) actggtgatttttattgattgctgagttttgaatgcattgaaCGTCTaca < 1:3465935‑M2/8‑1 (MQ=255) actggtgatttttattgattgctgagttttgaatacattgaaCGTCTaca < 1:6921278‑M2/8‑1 (MQ=255) actggtgatttttattgattgctgagttttgaatacattgaaCGTCTaca > 1:4664004‑M2/43‑50 (MQ=255) actggtgatttttattgattgctgagttttgaatacattgaaCGTCTaca < 1:128109‑M2/8‑1 (MQ=255) actggtgatttttattgattgctgagttttgaatacattgaaCGTCTaca > 1:249070‑M2/43‑50 (MQ=255) ctggtgatttttattgattgctgagttttgaatacattgaaCGTCTacac > 1:6523135‑M2/42‑50 (MQ=255) tggtgatttttattgattgctgagttttgaatacattgaaCGTCTACACt > 1:4128347‑M2/41‑50 (MQ=255) tggtgatttttattgattgctgagttttgaatacattgaaCGTCTACACt > 1:6689864‑M2/41‑50 (MQ=255) ggtgatttttattgattgctgagttttgaatacattgaaCGTCTACACt > 1:2602697‑M2/40‑49 (MQ=255) gtgatttttattgattgctgagttttgaatacattgaaCGTCTACACtt < 1:4324067‑M2/11‑1 (MQ=255) gtgatttttattgattgctgagttttgaatacattgaaCGTCTACACt < 1:6448581‑M2/10‑1 (MQ=255) gtgatttttattgattgctgagttttgaatacattgaaCGTCTACACTTa < 1:6927172‑M2/12‑1 (MQ=255) gatttttattgattgctgagttttgaatacattgaaCGTCTACACTTACt > 1:2744666‑M2/37‑50 (MQ=255) gatttttattgattgctgagttttgaatacattgaaCGTCTACACTTACt > 1:285956‑M2/37‑50 (MQ=255) gatttttattgattgctgagttttgaatacattgaaCGTCTACACTTACt > 1:3134262‑M2/37‑50 (MQ=255) atttttattgattgctgagttttgaatacattgaaCGTCTACACTTACTc < 1:6406139‑M2/15‑1 (MQ=255) atttttattgattgctgagttttgaatacattgaaCGTCTACACTTACTc > 1:3460295‑M2/36‑50 (MQ=255) ttttattgattgctgagttttgaatacattgaaCGTCTACACTTACTCCt > 1:5228034‑M2/34‑50 (MQ=255) ttttattgattgctgagttttgaatacattgaaCGTCTACACTTACTCCt > 1:197861‑M2/34‑50 (MQ=255) tttattgattgctgagttttgaatacattgaaCGTCTACACTTACTCCt < 1:2330527‑M2/17‑1 (MQ=255) tttattgattgctgagttttgaatacattgaaCGTCTACACTTACTCCt < 1:2963197‑M2/17‑1 (MQ=255) tttattgattgctgagttttgaatacattgaaCGTCTACACTTACTCCTg > 1:732760‑M2/33‑50 (MQ=255) ttattgattgctgagttttgaatacattgaaCGTCTACACTTACTCCTg < 1:6204455‑M2/18‑1 (MQ=255) tattgattgctgagttttgaatacattgaaCGTCTACACTTACTCCTGt < 1:2662338‑M2/19‑1 (MQ=255) tattgattgctgagttttgaatacattgaaCGTCTACACTTACTCCTGt < 1:5169521‑M2/19‑1 (MQ=255) attgattgctgagttttgaatacattgaaCGTCTACACTTACTCCTGTa < 1:4456880‑M2/20‑1 (MQ=255) ttgattgctgagttttgaatacattgaaCGTCTACACTTACTCCTGTaaa < 1:2302463‑M2/22‑1 (MQ=255) ttgattgctgagttttgaatacattgaaCGTCTACACTTACTCCTGTaa < 1:3264232‑M2/21‑1 (MQ=255) ttgattgctgagttttgaatacattgaaCGTCTACACTTACTCCTGTaa < 1:3456122‑M2/21‑1 (MQ=255) ttgattgctgagttttgaatacattgaaCGTCTACACTTACTCCTGTaa < 1:5252361‑M2/21‑1 (MQ=255) tgattgctgagttttgaatacattgaaCGTCTACACTTACTCCTGTAAAc > 1:7145982‑M2/28‑50 (MQ=255) tgattgctgagttttgaatacattgaaCGTCTACACTTACTCCTGTAAAc > 1:5090114‑M2/28‑50 (MQ=255) attgctgagttttgaatacattgaaCGTCTACACTTACTCCTGTAAAcc < 1:5350739‑M2/24‑1 (MQ=255) attgctgagttttgaatacattgaaCGTCTACACTTACTCCTGTAAACCg > 1:4151570‑M2/26‑50 (MQ=255) attgctgagttttgaatacattgaaCGTCTACACTTACTCCTGTAAACCg > 1:1821394‑M2/26‑50 (MQ=255) attgctgagttttgaatacattgaaCGTCTACACTTACTCCTGTAAACCg > 1:6380806‑M2/26‑50 (MQ=255) ttgctgagttttgaatacattgaaCGTCTACACTTACTCCTGTAAACCGc > 1:644036‑M2/25‑50 (MQ=255) ttgctgagttttgaatacattgaaCGTCTACACTTACTCCTGTAAACCGc < 1:7255450‑M2/26‑1 (MQ=255) tgctgagttttgaatacattgaaCGTCTACACTTACTCCTGTAAACCGCt > 1:754380‑M2/24‑50 (MQ=255) tgctgagttttgaatacattgaaCGTCTACACTTACTCCTGTAAACCGCt > 1:956195‑M2/24‑50 (MQ=255) tgctgagttttgaatacattgaaCGTCTACACTTACTCCTGTAAACCGCt > 1:6565501‑M2/24‑50 (MQ=255) ctgagttttgaatacattgaaCGTCTACACTTACTCCTGTAAACCGCTc < 1:2244794‑M2/28‑1 (MQ=255) ctgagttttgaatacattgaaCGTCTACACTTACTCCTGTAAACCGCTc < 1:7317331‑M2/28‑1 (MQ=255) tgagttttgaatacattgaaCGTCTACACTTACTCCTGTAAACCGCTCAg > 1:682596‑M2/21‑50 (MQ=255) tgagttttgaatacattgaaCGTCTACACTTACTCCTGTAAACCGCTCAg > 1:4078584‑M2/21‑50 (MQ=255) gagttttgaatacattgaaCGTCTACACTTACTCCTGTAAACCGCTCAg > 1:2112725‑M2/20‑49 (MQ=255) agttttgaatacattgaaCGTCTACACTTACTCCTGTAAACCGCTCAg > 1:353074‑M2/19‑48 (MQ=255) agttttgaatacattgaaCGTCTACACTTACTCCTGTAAACCGCTCAg > 1:494133‑M2/19‑48 (MQ=255) agttttgaatacattgaaCGTCTACACTTACTCCTGTAAACCGCTCAGGa < 1:4093066‑M2/32‑1 (MQ=255) gttttgaatacattgaaCGTCTACACTTACTCCTGTAAACCGCTCAGGAg < 1:558185‑M2/33‑1 (MQ=255) gttttgaatacattgaaCGTCTACACTTACTCCTGTAAACCGCTCAGGAg > 1:4027393‑M2/18‑50 (MQ=255) ttttgaatacattgaaCGTCTACACTTACTCCTGTAAACCGCTCAGGAg > 1:600633‑M2/17‑49 (MQ=255) ttttgaatacattgaaCGTCTACACTTACTCCTGTAAACCGCTCAGGAg > 1:1364933‑M2/17‑49 (MQ=255) ttttgaatacattgaaCGTCTACACTTACTCCTGTAAACCGCTCAGGAGc < 1:550964‑M2/34‑1 (MQ=255) tttgaatacattgaaCGTCTACACTTACTCCTGTAAACCGCTCAGGAg > 1:4014812‑M2/16‑48 (MQ=255) ttgaatacattgaaCGTCTACACTTACTCCTGTAAACCGCTCAGGAGCa < 1:6635909‑M2/35‑1 (MQ=255) ttgaatacattgaaCGTCTACACTTACTCCTGTAAACCGCTCAGGAGCa < 1:2280539‑M2/35‑1 (MQ=255) ttgaatacattgaaCGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAg > 1:2259873‑M2/15‑50 (MQ=255) tgaatacattgaaCGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAg > 1:7298112‑M2/14‑49 (MQ=255) tgaatacattgaaCGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAg < 1:3489889‑M2/36‑1 (MQ=255) gaatacattgaaCGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGt > 1:5542395‑M2/13‑49 (MQ=255) gaatacattgaaCGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGt < 1:1459125‑M2/37‑1 (MQ=255) gaatacattgaaCGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGt > 1:1016295‑M2/13‑49 (MQ=255) aatacattgaaCGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTaa > 1:4447957‑M2/12‑50 (MQ=255) aatacattgaaCGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTaa > 1:4566074‑M2/12‑50 (MQ=255) aatacattgaaCGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTaa > 1:3844440‑M2/12‑50 (MQ=255) atacattgaaCGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAAt > 1:5077903‑M2/11‑50 (MQ=255) tacattgaaCGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATg < 1:3871535‑M2/41‑1 (MQ=255) tacattgaaCGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATg < 1:740823‑M2/41‑1 (MQ=255) acattgaaCGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATg > 1:7088380‑M2/9‑49 (MQ=255) cattgaaCGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGaa > 1:2324009‑M2/8‑50 (MQ=255) cattgaaCGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGa < 1:1504433‑M2/42‑1 (MQ=255) attgaaCGTCTACACTTACTCCTGTAATCCGCTCAGGAGCAGAAAtgact > 1:5780301‑M2/7‑48 (MQ=255) attgaaCGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGAAt > 1:2614431‑M2/7‑50 (MQ=255) attgaaCGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGAAt > 1:4969784‑M2/7‑50 (MQ=255) ttgaaCGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGAATc > 1:7297889‑M2/6‑50 (MQ=255) aaCGTCTCCACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGAATCTa > 1:6580388‑M2/3‑49 (MQ=255) aaCGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGAATCTa > 1:30254‑M2/3‑49 (MQ=255) aaCGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGAATCTa > 1:5194251‑M2/3‑49 (MQ=255) aaCGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGAATCTa < 1:3868867‑M2/47‑1 (MQ=255) aaCGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGAATCTAc < 1:5447129‑M2/48‑1 (MQ=255) aCGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGAATCTAc > 1:6819333‑M2/2‑49 (MQ=255) aCGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGAATCTACa < 1:5885319‑M2/49‑1 (MQ=255) aCGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGAATCTACa < 1:4074044‑M2/49‑1 (MQ=255) | AAATTTGTCCTGCTACAACAGGATTAACTTCACAAATATCATTTCTCAACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGAATCTACA > NC_000913/738914‑739011 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |