| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 729,365 | Δ9,598 bp | rhsC–ybfD | rhsC, ybfB, ybfO, ybfC, ybfQ, ybfL, ybfD | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 729365 | 738962 | 9598 | 109 [0] | [0] 106 | rhsC–ybfD | rhsC,ybfB,ybfO,ybfC,ybfQ,ybfL,ybfD |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 729364 | 0 (0.000) | 98 (1.050) | 62/94 | 0.0 | 100% | intergenic (+24/‑219) | ybfA/rhsC | DUF2517 domain‑containing protein YbfA/rhs element protein RhsC |
| ? | NC_000913 | 738963 = | 0 (0.000) | intergenic (+110/‑38) | ybfD/ybgA | H repeat‑associated putative transposase YbfD/DUF1722 domain‑containing protein YbgA | |||||
Only 100 of 109 total aligned reads displayed.
AAAAGGCAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAAAACCGCCAGCGGAAACGCTGGCGGTTTTTTGTATCAGGAAGATGTTCAG > NC_000913/729315‑729413 | aaaaGGCAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAA > 1:3281323‑M1/1‑50 (MQ=255)aaaaGGCAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAA > 1:5996232‑M1/1‑50 (MQ=255)aaaaGGCAACTGGAGATTTTTATTGATTGCTGAGTTTTGAATACATTGAA > 1:291106‑M1/1‑50 (MQ=255) aaaGGCAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAAc > 1:4968103‑M1/1‑49 (MQ=255) aaaGGCAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAAc > 1:931287‑M1/1‑49 (MQ=255) aaGGCAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAAcg > 1:684464‑M1/1‑48 (MQ=255) aGGCAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAAcgt > 1:2394183‑M1/1‑47 (MQ=255) ggCAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAAcgtc > 1:7014014‑M1/1‑46 (MQ=255) ggCAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAAcgtc > 1:6334448‑M1/1‑46 (MQ=255) ggCAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAAcgtc < 1:4412581‑M1/50‑5 (MQ=255) ggCAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAAcgtc < 1:7125577‑M1/50‑5 (MQ=255) ggCAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAAcgtc > 1:3732311‑M1/1‑46 (MQ=255) gCAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAAcgtct < 1:3357022‑M1/50‑6 (MQ=255) gCAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAAcgtc > 1:2203938‑M1/1‑45 (MQ=255) cAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAAcgtcta > 1:2313181‑M1/1‑44 (MQ=255) cAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAAcgtcta < 1:139523‑M1/50‑7 (MQ=255) aaCTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAAcgtctac < 1:6967228‑M1/50‑8 (MQ=255) aaCTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAAcgtctac < 1:603570‑M1/50‑8 (MQ=255) aaCTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAAcgtcta > 1:7232160‑M1/1‑43 (MQ=255) aaCTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAAcgtcta > 1:7279033‑M1/1‑43 (MQ=255) aCTGGTGATTTTTATTGATTGCTGAGTTTTGAATGCATTGAAcgtctaca < 1:3465935‑M1/50‑9 (MQ=255) aCTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAAcgtctaca < 1:128109‑M1/50‑9 (MQ=255) aCTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAAcgtctaca < 1:6921278‑M1/50‑9 (MQ=255) aCTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAAcgtctaca > 1:4664004‑M1/1‑42 (MQ=255) aCTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAAcgtctaca > 1:249070‑M1/1‑42 (MQ=255) cTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAAcgtctacac > 1:6523135‑M1/1‑41 (MQ=255) tGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAAcgtctacact > 1:4128347‑M1/1‑40 (MQ=255) ggTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAAcgtctacact > 1:2602697‑M1/1‑39 (MQ=255) gTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAAcgtctacactta < 1:6927172‑M1/50‑13 (MQ=255) gTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAAcgtctacact < 1:6448581‑M1/48‑11 (MQ=255) gATTTTTATTGATTGCTGAGTTTTGAATACATTGAAcgtctacacttact > 1:2744666‑M1/1‑36 (MQ=255) gATTTTTATTGATTGCTGAGTTTTGAATACATTGAAcgtctacacttact > 1:3134262‑M1/1‑36 (MQ=255) aTTTTTATTGATTGCTGAGTTTTGAATACATTGAAcgtctacacttactc < 1:6406139‑M1/50‑16 (MQ=255) aTTTTTATTGATTGCTGAGTTTTGAATACATTGAAcgtctacacttactc > 1:3460295‑M1/1‑35 (MQ=255) ttttATTGATTGCTGAGTTTTGAATACATTGAAcgtctacacttactcct > 1:5228034‑M1/1‑33 (MQ=255) ttttATTGATTGCTGAGTTTTGAATACATTGAAcgtctacacttactcct > 1:197861‑M1/1‑33 (MQ=255) tttATTGATTGCTGAGTTTTGAATACATTGAAcgtctacacttactcctg > 1:732760‑M1/1‑32 (MQ=255) tttATTGATTGCTGAGTTTTGAATACATTGAAcgtctacacttactcct < 1:2963197‑M1/49‑18 (MQ=255) tttATTGATTGCTGAGTTTTGAATACATTGAAcgtctacacttactcct < 1:2330527‑M1/49‑18 (MQ=255) ttATTGATTGCTGAGTTTTGAATACATTGAAcgtctacacttactcctg < 1:6204455‑M1/49‑19 (MQ=255) tATTGATTGCTGAGTTTTGAATACATTGAAcgtctacacttactcctgt < 1:2662338‑M1/49‑20 (MQ=255) attgattgCTGAGTTTTGAATACATTGAAcgtctacacttactcctgta < 1:4456880‑M1/49‑21 (MQ=255) ttgattgCTGAGTTTTGAATACATTGAAcgtctacacttactcctgtaaa < 1:2302463‑M1/50‑23 (MQ=255) ttgattgCTGAGTTTTGAATACATTGAAcgtctacacttactcctgtaa < 1:3264232‑M1/49‑22 (MQ=255) ttgattgCTGAGTTTTGAATACATTGAAcgtctacacttactcctgtaa < 1:5252361‑M1/49‑22 (MQ=255) ttgattgCTGAGTTTTGAATACATTGAAcgtctacacttactcctgtaa < 1:3456122‑M1/49‑22 (MQ=255) tgattgCTGAGTTTTGAATACATTGAAcgtctacacttactcctgtaaac > 1:7145982‑M1/1‑27 (MQ=255) tgattgCTGAGTTTTGAATACATTGAAcgtctacacttactcctgtaaac > 1:5090114‑M1/1‑27 (MQ=255) attgCTGAGTTTTGAATACATTGAAcgtctacacttactcctgtaaaccg > 1:4151570‑M1/1‑25 (MQ=255) attgCTGAGTTTTGAATACATTGAAcgtctacacttactcctgtaaaccg > 1:6380806‑M1/1‑25 (MQ=255) attgCTGAGTTTTGAATACATTGAAcgtctacacttactcctgtaaaccg > 1:1821394‑M1/1‑25 (MQ=255) attgCTGAGTTTTGAATACATTGAAcgtctacacttactcctgtaaacc < 1:5350739‑M1/49‑25 (MQ=255) ttgCTGAGTTTTGAATACATTGAAcgtctacacttactcctgtaaaccgc < 1:7255450‑M1/50‑27 (MQ=255) ttgCTGAGTTTTGAATACATTGAAcgtctacacttactcctgtaaaccgc > 1:644036‑M1/1‑24 (MQ=255) tgCTGAGTTTTGAATACATTGAAcgtctacacttactcctgtaaaccgct > 1:754380‑M1/1‑23 (MQ=255) tgCTGAGTTTTGAATACATTGAAcgtctacacttactcctgtaaaccgct > 1:956195‑M1/1‑23 (MQ=255) tgCTGAGTTTTGAATACATTGAAcgtctacacttactcctgtaaaccgct > 1:6565501‑M1/1‑23 (MQ=255) cTGAGTTTTGAATACATTGAAcgtctacacttactcctgtaaaccgctc < 1:2244794‑M1/49‑29 (MQ=255) cTGAGTTTTGAATACATTGAAcgtctacacttactcctgtaaaccgctc < 1:7317331‑M1/49‑29 (MQ=255) tGAGTTTTGAATACATTGAAcgtctacacttactcctgtaaaccgctcag > 1:682596‑M1/1‑20 (MQ=255) tGAGTTTTGAATACATTGAAcgtctacacttactcctgtaaaccgctcag > 1:4078584‑M1/1‑20 (MQ=255) gAGTTTTGAATACATTGAAcgtctacacttactcctgtaaaccgctcag > 1:2112725‑M1/1‑19 (MQ=255) aGTTTTGAATACATTGAAcgtctacacttactcctgtaaaccgctcagga < 1:4093066‑M1/50‑33 (MQ=255) aGTTTTGAATACATTGAAcgtctacacttactcctgtaaaccgctcag > 1:494133‑M1/1‑18 (MQ=255) gTTTTGAATACATTGAAcgtctacacttactcctgtaaaccgctcaggag < 1:558185‑M1/50‑34 (MQ=255) gTTTTGAATACATTGAAcgtctacacttactcctgtaaaccgctcaggag > 1:4027393‑M1/1‑17 (MQ=255) ttttGAATACATTGAAcgtctacacttactcctgtaaaccgctcaggagc < 1:550964‑M1/50‑35 (MQ=255) ttttGAATACATTGAAcgtctacacttactcctgtaaaccgctcaggagc < 1:2352045‑M1/50‑35 (MQ=255) ttttGAATACATTGAAcgtctacacttactcctgtaaaccgctcaggag > 1:1364933‑M1/1‑16 (MQ=255) tttGAATACATTGAAcgtctacacttactcctgtaaaccgctcaggag > 1:4014812‑M1/1‑15 (MQ=255) ttGAATACATTGAAcgtctacacttactcctgtaaaccgctcaggagcag > 1:2259873‑M1/1‑14 (MQ=255) ttGAATACATTGAAcgtctacacttactcctgtaaaccgctcaggagca < 1:6635909‑M1/49‑36 (MQ=255) tGAATACATTGAAcgtctacacttactcctgtaaaccgctcaggagcag < 1:3489889‑M1/49‑37 (MQ=255) tGAATACATTGAAcgtctacacttactcctgtaaaccgctcaggagcag > 1:7298112‑M1/1‑13 (MQ=255) gAATACATTGAAcgtctacacttactcctgtaaaccgctcaggagcagt > 1:5542395‑M1/1‑12 (MQ=255) gAATACATTGAAcgtctacacttactcctgtaaaccgctcaggagcagt < 1:1459125‑M1/49‑38 (MQ=255) gAATACATTGAAcgtctacacttactcctgtaaaccgctcaggagcagt > 1:1016295‑M1/1‑12 (MQ=255) aaTACATTGAAcgtctacacttactcctgtaaaccgctcaggagcagtaa > 1:3844440‑M1/1‑11 (MQ=255) aaTACATTGAAcgtctacacttactcctgtaaaccgctcaggagcagtaa > 1:4447957‑M1/1‑11 (MQ=255) aaTACATTGAAcgtctacacttactcctgtaaaccgctcaggagcagtaa > 1:4566074‑M1/1‑11 (MQ=255) aaTACATTGAAcgtctacacttactcctgtaaaccgctcaggagcagta < 1:4669946‑M1/49‑39 (MQ=255) aTACATTGAAcgtctacacttactcctgtaaaccgctcaggagcagtaat > 1:5077903‑M1/1‑10 (MQ=255) tACATTGAAcgtctacacttactcctgtaaaccgctcaggagcagtaatg < 1:3871535‑M1/50‑42 (MQ=255) tACATTGAAcgtctacacttactcctgtaaaccgctcaggagcagtaatg < 1:740823‑M1/50‑42 (MQ=255) aCATTGAAcgtctacacttactcctgtaaaccgctcaggagcagtaatg > 1:7088380‑M1/1‑8 (MQ=255) cATTGAAcgtctacacttactcctgtaaaccgctcaggagcagtaatgaa > 1:2324009‑M1/1‑7 (MQ=255) cATTGAAcgtctacacttactcctgtaaaccgctcaggagcagtaatga < 1:1504433‑M1/49‑43 (MQ=255) aTTGAAcgtctacacttactcctgtaatccgctcaggagcagaaatgact > 1:5780301‑M1/1‑6 (MQ=255) aTTGAAcgtctacacttactcctgtaaaccgctcaggagcagtaatgaat > 1:2614431‑M1/1‑6 (MQ=255) aTTGAAcgtctacacttactcctgtaaaccgctcaggagcagtaatgaat > 1:4969784‑M1/1‑6 (MQ=255) ttGAAcgtctacacttactcctgtaaaccgctcaggagcagtaatgaatc < 1:6974139‑M1/50‑46 (MQ=255) ttGAAcgtctacacttactcctgtaaaccgctcaggagcagtaatgaatc > 1:7297889‑M1/1‑5 (MQ=255) aacgtctccacttactcctgtaaaccgctcaggagcagtaatgaatcta > 1:6580388‑M1/1‑2 (MQ=255) aacgtctacacttactcctgtaaaccgctcaggagcagtaatgaatctac < 1:5447129‑M1/50‑49 (MQ=255) aacgtctacacttactcctgtaaaccgctcaggagcagtaatgaatcta > 1:30254‑M1/1‑2 (MQ=255) aacgtctacacttactcctgtaaaccgctcaggagcagtaatgaatcta > 1:5194251‑M1/1‑2 (MQ=255) aacgtctacacttactcctgtaaaccgctcaggagcagtaatgaatcta < 1:3868867‑M1/49‑48 (MQ=255) acgtctacacttactcctgtaaaccgctcaggagcagtaatgaatctaca < 1:5885319‑M1/50‑50 (MQ=255) acgtctacacttactcctgtaaaccgctcaggagcagtaatgaatctaca < 1:4074044‑M1/50‑50 (MQ=255) acgtctacacttactcctgtaaaccgctcaggagcagtaatgaatctac > 1:6819333‑M1/1‑1 (MQ=255) | AAAAGGCAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAAAACCGCCAGCGGAAACGCTGGCGGTTTTTTGTATCAGGAAGATGTTCAG > NC_000913/729315‑729413 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |