mutation predictions | marginal predictions | summary statistics | genome diff | command line log
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breseq version 0.33.1 revision 8505477f25b3
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Marginal new junction evidence (lowest skew 10 of 66 shown) | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 4613256 | 140 (0.980) | 5 (0.040) | 4/316 | NT | 4.1% | coding (846/1074 nt) | yjjU | putative patatin‑like family phospholipase |
| ? | NC_000913 | = 4613368 | 102 (0.760) | coding (958/1074 nt) | yjjU | putative patatin‑like family phospholipase | |||||
| * | ? | NC_000913 | 4565109 = | 90 (0.630) | 3 (0.020) | 3/314 | NT | 2.5% | coding (742/1152 nt) | yjiM | putative 2‑hydroxyglutaryl‑CoA dehydratase |
| ? | NC_000913 | 4565705 = | 153 (1.140) | coding (146/1152 nt) | yjiM | putative 2‑hydroxyglutaryl‑CoA dehydratase | |||||
| * | ? | NC_000913 | = 4466134 | 152 (1.060) | 3 (0.020) | 3/328 | NT | 2.1% | coding (47/1422 nt) | treB | trehalose‑specific PTS enzyme: IIB and IIC component |
| ? | NC_000913 | = 4466205 | 136 (0.970) | intergenic (‑25/+94) | treB/treR | trehalose‑specific PTS enzyme: IIB and IIC component/trehalose 6‑phosphate‑inducible trehalose regulon transcriptional repressor | |||||
| * | ? | NC_000913 | = 4327090 | 156 (1.090) | 4 (0.030) | 4/320 | NT | 2.7% | intergenic (‑356/‑45) | yjdM/crfC | zinc‑ribbon family protein/clamp‑binding sister replication fork colocalization protein, dynamin‑related |
| ? | NC_000913 | = 4327518 | 144 (1.060) | coding (384/2229 nt) | crfC | clamp‑binding sister replication fork colocalization protein, dynamin‑related | |||||
| * | ? | NC_000913 | 4231910 = | 193 (1.350) | 4 (0.030) | 4/322 | NT | 2.3% | coding (1324/1350 nt) | lysC | lysine‑sensitive aspartokinase 3 |
| ? | NC_000913 | 4232299 = | 161 (1.170) | coding (935/1350 nt) | lysC | lysine‑sensitive aspartokinase 3 | |||||
| * | ? | NC_000913 | 4095569 = | 154 (1.080) | 4 (0.030) | 4/328 | NT | 2.7% | coding (414/1260 nt) | rhaA | L‑rhamnose isomerase |
| ? | NC_000913 | 4096314 = | 133 (0.950) | coding (1135/1470 nt) | rhaB | rhamnulokinase | |||||
| * | ? | NC_000913 | = 4018097 | 166 (1.160) | 4 (0.030) | 4/322 | NT | 2.3% | coding (765/1428 nt) | rmuC | DNA recombination protein |
| ? | NC_000913 | = 4018324 | 175 (1.280) | coding (992/1428 nt) | rmuC | DNA recombination protein | |||||
| * | ? | NC_000913 | 3989606 = | 172 (1.200) | 4 (0.030) | 4/318 | NT | 2.7% | coding (223/741 nt) | hemD | uroporphyrinogen III synthase |
| ? | NC_000913 | 3989703 = | 131 (0.970) | coding (126/741 nt) | hemD | uroporphyrinogen III synthase | |||||
| * | ? | NC_000913 | 3988861 = | 134 (0.940) | 4 (0.030) | 4/328 | NT | 3.0% | coding (206/1182 nt) | hemX | putative uroporphyrinogen III methyltransferase |
| ? | NC_000913 | 3988926 = | 126 (0.900) | coding (141/1182 nt) | hemX | putative uroporphyrinogen III methyltransferase | |||||
| * | ? | NC_000913 | 3981712 = | 92 (0.640) | 4 (0.030) | 4/328 | NT | 3.8% | coding (826/1386 nt) | yifK | putative APC family amino acid transporter |
| ? | NC_000913 | 3981858 = | 113 (0.810) | coding (972/1386 nt) | yifK | putative APC family amino acid transporter | |||||