| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 232549 = | 139 (1.030) | 21 (0.170) | 15/180 | 9.9 | 14.6% | coding (624/624 nt) | yafE | putative S‑adenosyl‑L‑methionine‑dependent methyltransferase |
| ? | NC_000913 | 232587 = | 117 (0.950) | intergenic (+38/+10) | yafE/mltD | putative S‑adenosyl‑L‑methionine‑dependent methyltransferase/putative membrane‑bound lytic murein transglycosylase D | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
GCAACCAGGCGATAAGCTGACGTTGTTTGTGAAAAACAACAACATGCCAGATTCCTGACAAACCAGATAATAAAAAGGCACCGATTCCCCCGGTGCCTTTTTTATT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/232654‑232549‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tttttattATCTGGTTTGTCAGGAATCTGGCATGTTGTTGTTTTTCACAAACAACGTCAGCTTATCGCCTGGTTGCAGATTCGCAGTGTCGCTGTTCCAGCGCATC > NC_000913/232587‑232684 GCAACCAGGCGATAAGCTGACGTTGTTTGTGAAAAACAACAACATGCCAGATTCCTGACAAACCAGATAATAAAAAGGCACCGCTTCCCCCGGCGCCTT > 2:143508/1‑99GCAACCAGGCGATAAGCTGACGTTGTTTGTGAAAAACAACAACATGCCAGATTCCTGACAAACCAGATAATAAAAAGGCACCGATTCCCCCGGTGCCTT > 1:2630624/1‑99 CAACCAGGCGATAAGCTGACGTTGTTTGTGAAAAACAACAACATGCCAGATTCCTGACAAACCAGATAATAAAAAGGCACCGATTCCCCCGGTGCCTTT < 1:1037584/99‑1 CCAGGCGATAAGCTGACGTTGTTTGTGAAAAACAACAACATGCCAGATTCCTGACAAACCAGATAATAAAAAGGCTCCGATTCCCCCGGTGCCTTTTTT > 2:1621013/1‑99 CCAGGCGATAAGCTGACGTTGTTTGTGAAAAACAACAACATGCCAGATTCCTGACAAACCAGATAATAAAAAGGCACCGATTCCCCCGGTGCCTTTTTa < 2:162403/99‑2 CAGGCGATAAGCTGACGTTGTTTGTGAAAAACAACAACATGCCAGATTCCTGACAAACCAGATAATAAAAAGGCACCGATTCCCCCGGTGCCTTTTTTA < 1:145738/99‑1 CAGGCGATAAGCTGACGTTGTTTGTGAAAAACAACAACATGCCAGATTCCTGACAAACCAGATAATAAAAAGGCACCGATTCCCCCGGTGCCTTTTTTA > 1:3465893/1‑99 CAGGCGATAAGCTGACGTTGTTTGTGAAAAACAACAACATGCCAGATTCCTGACAAACCAGATAATAAAAAGGCACCGATTCCCCCGGTGCCTTTTTTA < 1:2236632/99‑1 CAGGCGATAAGCTGACGTTGTTTGTGAAAAACAACAACATGCCAGATTCCTGACAAACCAGATAATAAAAAGGCACCGATTCCCCCGGTGCCTTTTTTA < 1:2808869/99‑1 AGGCGATATGCTGACGTTGTTTGTGAAAAACAACAACATGCCAGATTCCTGACAAACCAGATAATAAAAAGGCACCGATTCCCCCGGTGCCTTTTTTAT < 1:3318924/99‑1 AGGCGATAAGCTGACGTTGTTTGTGAAAAACAACAACATGCCAGATTCCTGACAAACCAGATAATAAAAAGGCACCGATTCCCCCGGTGCCTTTTTTAT < 1:1343648/99‑1 AGGCGATAAGCTGACGTTGTTTGTGAAAAACAACAACATGCCAGATTCCTGACAAACCAGATAATAAAAAGGCACCGATTCCCCCGGTGCCTTTTTTAT > 2:192884/1‑99 AGGCGATAAGCTGACGTTGTTTGTGAAAAACAACAACATGCCAGATTCCTGACAAACCAGATAATAAAAAGGCACCGATTCCCCCGGTGCCTTTTTTAT < 2:1614108/99‑1 AGGCGATAAGCTGACGTTGTTTGTGAAAAACAACAACATGCCAGATTCCTGACAAACCAGATAATAAAAAGGCACCGATTCCCCCGGTGCCTTTTTTAT < 1:911250/99‑1 AGGCGATAAGCTGACGTTGTTTGTGAAAAACAACAACATGCCAGATTCCTGACAAACCAGATAATAAAAAGGCACCGATTCCCCCGGTGCCTTTTTTAT > 1:3144338/1‑99 GGCGATAAGCTGACGTTGTTTGTGAAAAACAACAACATGCCAGATTCCTGACAAACCAGATAATAAAAAGGCACCGATTCCCCCGGTGCCTTTTTTATT < 2:154981/99‑1 GATAAGCTGACGTTGTTTGTGAAAAACAACAACATGCCAGATTCCTGACAAACCAGATAATAAAAAGGCACCGATTCCCCAGGTGCCTTTTTTATTAat > 2:3144402/1‑97 ACAAACCAGATAATAAAAAGGCACCGATTCCCCCGGTGCCTTTTTTATTATCTGGTTTGTCAGGAATCTGGCATGTTGTTGTTTTTCACAAACAACGTC > 1:277631/1‑99 AAACCAGATAATAAAAAGGCACCGATTCCCCCGGTGCC‑TTTTTATTATCTGGTTTGTCAGGAATCTGGCATGTTGTTGTTTTTCACAAACAACGTCAGC > 1:3446601/1‑99 CAGATAATAAAAAGGCACCGATTCCCCCGGTGCCTTTTTTATTATCTGGTTTGTCAGGAATCTGGCATGTTGTTGTTTTTCACAAACAACGTCAGCTTA > 2:394079/1‑99 CAGATAATAAAAAGGCACCGATTCCCCCGGTGCCTTTTTTATTATCTGGTTTGTCAGGAATCTGGCATGTTGTTGTTTTTCACAAACAACGTCAGCTTA > 2:1247853/1‑99 CAGATAATAAAAAGGCACCGATTCCCCCGGTGCCTTTTTTATTATCTGGTTTGTCAGGAATCTGGCATGTTGTTGTTTTTCACAAACAACGTCAGCTTA > 1:3011621/1‑99 CAGATAATAAAAAGGCACCGATTCCCCCGGTGCCTTTTTTATTATCTGGTTTGTCAGGAATCTGGCATGTTGCTGTTTTTCACAAACAACGTCAGCTTA > 2:630303/1‑99 CAGATAATAAAAAGGCACCGATTCCCCCGGTGCC‑TTTTTATTATCTGGTTTGTCAGGAATCTGGCATGTTGTTGTTTTTCACAAACAACGTCAGCTTAT > 1:777739/1‑99 AGATAATAAAAAGGCACCGATTCCCCCGGTGCCTTTTTTATTATCTGGTTTGTCAGGAATCTGGCATGTTGTTGTTTTTCACAAACAACGTCAGCTTAT > 1:3334752/1‑99 GATAATAAAAAGGCACCGATTCCCCCGGTGCCTTTTTTATTATCTGGTTTGTCAGGAATCTGGCATGTTGTTGTTTTTCACAAACAACGTCAGCTTATC > 1:1569255/1‑99 GATAATAAAAAGGCACCGATTCCCCCGGTGCC‑TTTTTATTATCTGGTTTGTCAGGAATCTGGCCTGTTGTTGTTTTTCACAAACAACGTCAGCTTATCG > 2:200625/1‑99 ATAATAAAAAGGCACCGATTCCCCCGGTGCCTTTTTTATTATCTGGTTTGTCAGGAATCTGGCATGTTGTTGTTTTTCACAAACAACGTCAGCTTATCG > 2:2353466/1‑99 AATAAAAAGGCACCGATTCCCCCGGTGCCTTTTTTATTATCTGGTTTGTCAGGAATCTGGCATGTTGTTGTTTTTCACAAACAACGTCAGCTTATCGCC > 1:1638147/1‑99 TAAAAAGGCACCGATTCCCCCGGTGCC‑TTTTTATTATCTGGTTTGTCAGGAATCTGGCATGTTGTTGTTTTTCACAAACAACGTCAGCTTATAGCCTGG > 2:1002236/1‑99 AAAAAGGCACCGATTCCCCCGGTGCCTTTTTTATTATCTGGTTTGTCAGGAATCTGGCATGTTGTTGTTTTTCACAAACAACGTCAGCTTATCGCCTGG > 2:266299/1‑99 AAAGGCACCGATTCCCCCGGTGCC‑TTTTTATTATCTGGTTTGTCAGGAATCTGGCATGTTGTTGTTTTTCACAAACAACGTCAGCTTATCGCCTGGTTG > 2:2225526/1‑99 AAGGCGCCGATTCCCCCGGTACCTTTTTTATTATCTGGTTTGTCAGGAATCTGAGATCTTGTTGTTTTTCACAAACAACGTCAGCTTATCGCCTGGTTG > 2:3263635/1‑99 AGGCACCGATTCCCCCGGTGCCTTTTTTATTATCTGGTTTGTCAGGAATCTGGCATGTTGTTGTTTTTCACAAACAACGTCAGCTTATCGCCTGGTTGC > 1:2977761/1‑99 AGGCACCGATTCCCCCGGTGCCTTTTTTATTATCTGGTTTGTCAGGAATCTGGCATGTTGTTGTTTTTCACAAACAACGTCAGCTTATCGCCTGGTTGC > 1:1888801/1‑99 GCACCGATTCCCCCGGTGCC‑TTTTTATTATCTGGTTTGTCAGGAATCTGGCATGTTGTTGTTTTTCACAAACAACGTCAGCTTATCGCCTGGTTGCAGA > 1:1718086/1‑99 CGATTCCCCCGGTGCCTTTTTTATTATCTGGTTTGTCAGGAATCTGGCATGTTGTTGTTTTTCACAAACAACGTCAGCTTATCGCCTGGTTGCAGATTC > 1:1911494/1‑99 TTTTTATTATCTGGTTTGTCAGGAATCTGGCATGTTGTTGTTTTTTTTATTCTTCTTCAGCTTATCGCCTGGTTGCAGATTCGCAGTGTCGCTGTTCCA > 2:537356/1‑99 TTTTTATTATCTGGTTTGTCAGGAATCTGGCATGTTGTTGTTTTTCACAAACAACGTCAGCTTATCGCCTGGTTGCAGATTCGCAGTGTCGCTGTTCCA > 2:551950/1‑99 TTTTTATTATCTGGTTTGTCAGGAATCTGGCATGTTGTTGTTTTTCACAAACAACGTCAGCTTATCGCCTGGTTGCAGATTCGCAGTGTCGCTGTTCCA > 1:378290/1‑99 TTTTTATTATCTGGTTTGTCAGGAATCTGGCATGTTGTTGTTTTTCACAAACAACGTCAGCTTATCGCCTGGTTGCAGATTCGCAGTGTCGCTGTTCCA > 2:2725668/1‑99 TTTTTATTATCTGGTTTGTCAGGAATCTGGCATGTTGTTGTTTTTCACAAACAACGTCAGCTTATCGCCTGGTTGCAGATTCGCAGTGTCGCTGTTCCA > 2:3019334/1‑99 TTTTATTATCTGGTTTGTCAGGAATCTGGCATGTTGTTGTTTTTCACAAACAACGTCAGCTTATCGCCTGGTTGCAGATTCGCAGTGTCGCTGTTCCAG > 1:1470816/1‑99 TTTATTATCTGGTTTGTCAGGAATCTGGCATGTTGTTGTTTTTCACAAACAACGTCAGCTTATCGCCTGGTTGCAGATTCGCAGTGTCGCTGTTCCAGC < 2:1745637/99‑1 TTTATTATCTGGTTTGTCAGGAATCTGGCATGTTGTTGTTTTTCACAAACAACGTCAGCTTATCGCCTGGTTGCAGATTCGCAGTGTCGCTGTTCCAGC > 2:2792090/1‑99 TATTATCGGGTTTGTCAGGAATCTGGCATGTTGTTGTTTTTCACAAACAACGTCAGCTTATCGCCTGGTTGCAGATTCGCAGTGTCGCTGTTCCAGCGC > 2:353082/1‑99 tcTATCTGGTTTGTCAGGAATCTGGCATGTTGTTGTTTTTCACAAACAACGTCAGCTTATCGCCTGGTTGCAGATTCGCAGTGTCGCTGTTCCAGCGCA < 1:1389941/97‑1 ATTATCTGGTTTGTCAGGAATCTGGCATGTTGTTGTTTTTCACAAACAACGTCAGCTTATCGCCTGGTTGCAGATTCGCAGTGTCGCTGTTCCAGCGCA > 1:1815904/1‑99 TTATCTGGTTTGTCAGGAATCTGGCATGTTGTTGTTTTTCACAAACAACGTCAGCTTATCGCCTGGTTGCAGATTCGCAGTGTCGCTGTTCCAGCGCAT < 2:2092305/99‑1 TTATCTGGTTTGTCAGGAATCTGGCATGTTGTTGTTTTTCACAAACAACGTCAGCTTATCGCCTGGTTGCAGATTCGCAGTGTCGCTGTTCCAGCGCAT < 2:80713/99‑1 TATCTGGTTTGTCAGGAATCTGGCATGTTGTTGTTTTTCACAAACAACGTCAGCTTATCGCCTGGTTGCAGATTCGCAGTGTCGCTGTTCCAGCGCATC < 1:2102071/99‑1 GCAACCAGGCGATAAGCTGACGTTGTTTGTGAAAAACAACAACATGCCAGATTCCTGACAAACCAGATAATAAAAAGGCACCGATTCCCCCGGTGCCTTTTTTATT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/232654‑232549‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tttttattATCTGGTTTGTCAGGAATCTGGCATGTTGTTGTTTTTCACAAACAACGTCAGCTTATCGCCTGGTTGCAGATTCGCAGTGTCGCTGTTCCAGCGCATC > NC_000913/232587‑232684 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |