BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	232549 =	139 (1.030)	21 (0.170)	15/180	9.9	14.6%	coding (624/624 nt)	yafE	putative S‑adenosyl‑L‑methionine‑dependent methyltransferase
*	?	NC_000913	232587 =	117 (0.950)	21 (0.170)	15/180	9.9	14.6%	intergenic (+38/+10)	yafE/mltD	putative S‑adenosyl‑L‑methionine‑dependent methyltransferase/putative membrane‑bound lytic murein transglycosylase D
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

Only 100 of 133 total aligned reads displayed.

CAGAATGATGGCTTTTTCACCAGTGATATCATCATGGTAGATGCACATAAAGCGGCATAAATAAAAAAGGCACCGGGGGAATCGGTGCCTTTTTATTATCTGGTTTGTCAGGAATCTGGCATGTTGTTGTTTTTCACAAACAACGTCAGCTTATCGCCTGGTTGCAGATTCGCAGTGTCGCTGTTCCAGCGCATCA  >  NC_000913/232490‑232685

cAGAATGATGGCTTTTTCACCAGTGATATCATCATGGTAGATGCACATAAAGCGGCATAAATAAAAAAGGCACCGGGGGAATCGGTGCCTTTTtattat                                                                                                   <  1:2038288/99‑1 (MQ=255)

  gAATGATGGCTTTTTCACCAGTGATATCATCATGGTAGATGCACATAAAGCGGCATAAATAAAAAAGGCACCGGGGGAATCGGTGCCTTTTTATTATCt                                                                                                 >  1:513363/1‑99 (MQ=255)

  gAATGATGGCTTTTTCACCAGTGATATCATCATGGTAGATGCACATAAAGCGGCATAAATAAAAAAGGCACCGGGGGAATCGGTGCCTTTTTATTATCt                                                                                                 <  1:2646557/99‑1 (MQ=255)

   aaTGATGGCTTTTTCACTAGTTATAACATGATGGTAAGTGCACATAAGGCGGCATAAATAAAAAAGACACCGGGGGCATCGGTGCCTTTTTAATATCTg                                                                                                >  2:1036326/1‑99 (MQ=255)

   aaTGATGGCTTTTTCACCAGTGATATCATCATGGTAGATGCACATAAAGCGGCATAAATAAAAAAGGCACCGGGGGAATCGGTGCCTTTTTATTATCTg                                                                                                <  1:1547186/99‑1 (MQ=255)

      gatgGCTTTTTCACCAGTGATATCATCATGGTAGATGCACATAAAGCGGCATAAATAAAAAAGGCACCGGGGGAATCGGTGCCTTTTTATTATCTGGtt                                                                                             <  2:644249/99‑1 (MQ=255)

      gatgGCTTTTTCACCAGTGATATCATCATGGTAGATGCACATAAAGCGGCATAAATAAAAAAGGCACCGGGGGAATCGGTGCCTTTTTATTATCTGGtt                                                                                             <  2:199823/99‑1 (MQ=255)

      gatgGCTTTTTCACCAGTGATATCATCATGGTAGATGCACATAAAGCGGCATAAATAAAAAAGGCACCGGGGGAATCGGTGCCTTTTTATTATCTGGtt                                                                                             <  2:615778/99‑1 (MQ=255)

      gatgGCTTTTTCACCAGTGATATCATCATGGTAGATGCACATAAAGCGGCATAAATAAAAAAGGCACCGGGGGAATCGGTGCCTTTTTATTATCTGGtt                                                                                             >  1:625940/1‑99 (MQ=255)

       atgGCTTTTTCACCAGTGATATCATCATGGTAGATGCACATAAAGCGGCATAAATAAAAAAGGCACCGGGGGAATCGGTGCCTTTTTATTATCTGGttt                                                                                            >  1:944140/1‑99 (MQ=255)

        tgGCTTTTTCACCAGTGATATCATCATGGTAGATGCACATAAAGCGGCATAAATAAAAAAGGCACCGGTGGAATCGGTGCCTTTTTATTATCTGGTTTg                                                                                           >  1:410050/1‑99 (MQ=255)

        tgGCTTTTTCACCAGTGATATCATCATGGTAGATGCACATAAAGCGGCATAAATAAAAAAGGCACCGGGGGAATCGGTGCCTTTTTATTATCTGGTTTg                                                                                           >  1:1262106/1‑99 (MQ=255)

           cTTTTTCACCAGTGATATCATCATGGTAGATGCACATAAAGCGGCATAAATAAAAAAGGCACCGTGGGAATCGGTGCCTTTTTATTATCTGGTTTGTCa                                                                                        <  1:155679/99‑1 (MQ=255)

           cTTTTTCACCAGTGATATCATCATGGTAGATGCACATAAAGCGGCATAAATAAAAAAGGCACCGGGGGAATCGGTGCCTTTTTATTATCTGGTTTGTCa                                                                                        <  2:1494239/99‑1 (MQ=255)

           cTTTGTCACCAGTGATATCATCATGGTAGATGCACATAAAGCGGCATAAATAAAAAAGGCACCGGGGGAATCGGTGCCTTTTTATTATCTGGTTTGTCa                                                                                        <  1:2689346/99‑1 (MQ=255)

            tttttCACCAGTGATATCATCATGGTAGATGCACATAAAGCGGCATAAATAAAAAAGGCACCGGGGGAATCGGTGCCTTTTTATTATCTGGTTTGTCAg                                                                                       >  2:1074901/1‑99 (MQ=255)

             ttttCACCAGTGATATCATCATGGTAGATGCACATAAAGCGGCATAAATAAAAAAGGCACCGGGGGAATCGGTGCCTTTTTATTATCTGGTTTGTCAgg                                                                                      <  2:479747/99‑1 (MQ=255)

                  aCCAGTGATATCATCATGGTAGATGCACATAAAGCGGCATAAATAAAAAAGGCACCGGGGGAATCGGTGCCTTTTTATTATCTGGTTTGTCAGGAATCt                                                                                 >  2:2011860/1‑99 (MQ=255)

                   ccAGTGATATCATCATGGTAGATGCACATAAAGCGGCATAAATAAAAAAGGCACCGGGGGAATCGGTGCCTTTTTATTATCTGGTTTGTCAGGAATCTg                                                                                >  1:2337780/1‑99 (MQ=255)

                   ccAGTGATATCATCATGGTAGATACACATAAAGCGGCATAAATAAAAAAGGCACCGGGGGAATCGGTGCCTTTTTATTATCTGGTTTGTCAGGAATCTg                                                                                >  1:2094187/1‑99 (MQ=255)

                    cAGTGATATCATCATGGTAGATGCACATAAAGCGGCATAAATAAAAAAGGCACCGGGGGTATCGGTGCCTTTTTATTATCTGGTTTGTCAGGAATCTgg                                                                               >  2:2908078/1‑99 (MQ=255)

                     aGTGATATCATCATGGTAGATGCACATAAAGCGGCATAAATAAAAAAGGCACCGGGGGAATCGGTGCCTTTTTATTATCTGGTTTGTCAGGAATCTGGc                                                                              >  1:197439/1‑99 (MQ=255)

                     aGTGATATCACGGTGGTAGATGCACATAAAGCGGCATAAATAAAAAAGGCACCGGGGGAATCGGTGCCTTTTTATTATCTGGTTTGTCAGGAATCTGGc                                                                              <  2:2759912/99‑1 (MQ=255)

                       tGATATCATCATGGTAGATGCACATAAAGCGTCATAAATAAAAAAGGCACCGGGGGAATCGGTGCCTTTTTATTATCTGGTTTGTCAGGAATCTGGCAt                                                                            >  1:224637/1‑99 (MQ=255)

                       tGATATCATCATGGTAGATGCACATAAAGCGGCATAAATAAAAAAGGCACCGGGGGAATCGGTGCCTTTTTATTATCTGGTTTGTCAGGAATCTGGCAt                                                                            <  2:2640020/99‑1 (MQ=255)

                        gATATCATCATGGTAGATGCACATAAAGCGGCATAAATAAAAAAGGCACCGGGGGAATCGGTGCCTTTTTATTATCTGGTTTGTCAGGAATCTGGCAtg                                                                           <  1:1011659/99‑1 (MQ=255)

                         atatCATCATGGTAGATGCACATAAAGCGGCATAAATAAAAAAGGCACCGGGGGAATCGGTGCCTTTTTATTATCTGGTTTGTCAGGAATCTGGCAtgt                                                                          >  2:1041176/1‑99 (MQ=255)

                          tatCATCATGGTAGATGCACATAAAGCGGCATAAATAAAAAAGGCACCGGGGGAATCGGTGCCTTTTTATTATCTGGTTTGTCAGGAATCTGGCAtgtt                                                                         >  1:1778558/1‑99 (MQ=255)

                            tcatcaTGGTAGATGCACATAAAGCGGCATAAATAAAAAAGGCACCGGGGGAATCGGTGCCTTTTTATTATCTGGTTTGTCAGGAATCTGGCAtgttgt                                                                       >  2:2688225/1‑99 (MQ=255)

                            tcatcaTGGTAGATGCACATAAAGCGGCATAAATAAAAAAGGCACCGGGGGAATCGGTGCCTTATTATTATCTGGTTTGTCCGGCATCTGGCAtgttgt                                                                       >  2:2886746/1‑99 (MQ=255)

                              atcatGGTAGAGGCACATAAAGCGGCATAAATAAAAAAGGCACCGGGGGAATCGGTGCCTTTTTATTATCTGGTTTGTCAGGAATCTGGCAtgttgttg                                                                     <  2:1704048/99‑1 (MQ=255)

                               tcatGGTAGATGCACATAAAGCGGCATAAATAAAAAAGGCACCGGGGGAATCGGTGCCTTTTTATTATCTGGTTTGTCAGGAATCTGGCAtgttgttgt                                                                    >  2:499107/1‑99 (MQ=255)

                               tcatGGTAGATGCACATAAAGCGGCATAAATAAAAAAGGCACCGGGGGAATCGGTGCCTTTTTATTATCTGGTTTGTCAGGAATCTGGCAtgttgttgt                                                                    >  2:1664790/1‑99 (MQ=255)

                                 atGGTAGATGCACATAAAGCGGCATAAATAAAAAAGGCACCGGGGGAATCGGTGCCTTTTTATTATCTGGTTTGTCAGGAATCTGGCATGTTGTTGttt                                                                  <  1:1931228/99‑1 (MQ=255)

                                 atGGTAGATGCACATAAAGCGGCATAAATAAAAAAGGCACCGGGGGAATCGGTGCCTTTTTATTATCTGGTTTGTCAGGAATCTGGCATGTTGTTGttt                                                                  >  2:3043433/1‑99 (MQ=255)

                                  tGGTAGATGCACATAAAGCGGCATAAATAAAAAAGGCACCGGGGGAATCGGTGCCTTTTAATTATCTGGTTTGTCAGGAATCTGGCATGTTGTTGtttt                                                                 <  2:128173/99‑1 (MQ=255)

                                   ggTAGATGCACATAAAGCGGCATAAATAAAAAAGGCACCGGGGGAATCGGTGCCTTTTTATTATCTGGTTTGTCAGGAATCTGGCATGTTGTTGttttt                                                                >  2:1797076/1‑99 (MQ=255)

                                   ggTAGATGCACATAAAGCGGCATAAATAAAAAAGGCACCGGGGGAATCGGTGCCTTTTTATTATCTGGTTTGTCAGGAATCTGGCATGTTGTTGttttt                                                                >  1:799456/1‑99 (MQ=255)

                                   ggTAGATGCACATAAAGCGGCATAAATAAAAAAGGCACCGGGGGAATCGGTGCCTTTTTATTATCTGGTTTGTCAGGAATCTGGCATGTTGTTGttttt                                                                <  1:2827235/99‑1 (MQ=255)

                                    gTAGATGCAGATAAAGCGGCATAAATAAAAAAGGCTCCGGGGGAATCGGTGCCTTTTTATTATCTGGTTTGTCAGGAATCTGGCATGTTGTTGTTTTTc                                                               <  2:547809/99‑1 (MQ=255)

                                    gTAGATGCACATAAAGCGGCATAAATAAAAAAGGCACCGGGGGAATCGGTGCCTTTTTATTATCTGGTTTGTCAGGAATCTGGCATGTTGTTGTTTTTc                                                               <  1:1437163/99‑1 (MQ=255)

                                     tAGATGCACATAAAGCGGCATAAATAAAAAAGGCACCGGGGGAATCGGTGCCTTTTTATTATCTGGTTTGTCAGGAATCTGGCATGTTGTTGTTTTTca                                                              <  2:2791716/99‑1 (MQ=255)

                                         tGCACATAAAGCGGCATAAATAAAAAAGGCACCGGGGGAATCGGTGCCTTTTTATTATCTGGTTTGTCAGGAATCTGGCATGTTGTTGTTTTTCacaaa                                                          >  2:1275462/1‑99 (MQ=255)

                                          gCACATAAAGCGGCATAAATAAAAAAGGCACCGGGGGAATCGGTGCCTTTTTATTATCTGGTTCGTCAGGAATCTGGCATGTTGTTGTTTTTCacaaac                                                         >  2:2615059/1‑99 (MQ=255)

                                          gCACATAAAGCGGCATAAATAAAAAAGGCACCGGGGGAATCGGTGCCTTTTTATAATCTGGTTTGTCAGGAATCTGGCATGTTGTTGTTTTTCacaaac                                                         >  2:1686702/1‑99 (MQ=255)

                                           cacaTAAAGCGGCATAAATAAAAAAGGCACCGGGGGAATCGGTGCCTTTTTATTATCTGGTTTGTCAGGAATCTGGCATGTTGTTGTTTTTCacaaaca                                                        >  1:2940905/1‑99 (MQ=255)

                                            acaTAAAGCGGGATAAATAAAAAAGGCACCGGGGGAATCGGTGCCTTTTTATTATCTGGTTTGTCAGGAATCTGGCATGTTGTTGTTTGTGaaaaacaa                                                       <  1:212936/99‑1 (MQ=255)

                                              aTAAAGCGGCATAAATAAAAAAGGCACCGGGGGAATCGGTGCCTTTTTATTATCTGGTTTGTCAGGAATCTGGCATGTTGTTGTTTTTCACAAACAACg                                                     >  1:3345873/1‑99 (MQ=255)

                                              aTAAAGCGGCATAAATAAAAAAGGCACCGGGGGAATCGGTGCCTTTTTATTATCTGGTTTGTCAGAAATCTGGCATGTTGTTGTTTTTCACAAACAACg                                                     >  1:3445510/1‑99 (MQ=255)

                                               tAAAGCGGCATAAATAAAAAAGGCACCGGGGGAATCGGTGCCTTTTTATTATCTGGTTTGTCAGGAATCTGGCATGTTGTTGTTTTTCACAAACAACGt                                                    <  1:89398/99‑1 (MQ=255)

                                               tAAAGCGGCATAAATAAAAAAGGCACCGGGGGAATCGGTGCCTTTTTATTATCTGGTTTGTCAGGAATCTGGCATGTTGTTGTTTGTGAAAaacaacaa                                                    <  2:1771929/99‑3 (MQ=255)

                                               tAAAGCGGCATAAATAAAAAAGGCACCGGGGGAATCGGTGCCTTTTTATTATCTGGTTTGTCAGGAATCTGGCATGTTGTTGTTTGTGAAAaacaacaa                                                    <  1:2494304/99‑3 (MQ=255)

                                               tAAAGCGGCATAAATAAAAAAGGCACCGGGGGAATCGGTGCCTTTTTATTATCTGGTTTGTCAGGAATCTGGCATGTTGTTGTTTGTGAAAaacaacaa                                                    <  1:741707/99‑3 (MQ=255)

                                                 aaGCGGCATAAATAAAAAAGGCACCGGGGGAATCGGTGCCTTTTTATTATCTGGTTTGTCAGGAATCTGGCATGTTGTTGTTTTTCACAAACAACGTCa                                                  <  2:1997954/99‑1 (MQ=255)

                                                 aaGCGGCATAAATAAAAAAGGCACCGGGGGAATCGGTGCCTTTTTATTATCTGGTTTGTCAGGAATCTGGCATGTTGTTGTTTTTCACAAACAACGTCa                                                  >  1:2158293/1‑99 (MQ=255)

                                                 aaGCGGCATAAATAAAAAAGGCACCGGGGGAATCGGTGCCTTTTTATTATCTGGTTTGTCAGGAATCTGGCATGTTGTTGTTTTTCACAAACAACGTCa                                                  <  2:2939747/99‑1 (MQ=255)

                                                        attaataaaAAAGGCACCTGGGGAATCGGTGCCTTTTTATTATCTGGTTTGTCAGGAATCTGGCATGTTGTTGTTTTTCACAAACAACGTCAGCTTATc                                           <  2:3144402/96‑1 (MQ=255)

                                                          aaataaaAAAGGCACCGGGGGAATCGGTGCCTTTTTATTATCTGGTTTGTCAGGAATCTGGCATGTTGTTGTTTTTCACAAACAACGTCAGCTTATCGc                                         >  1:2247641/1‑99 (MQ=255)

                                                          aaataaaAAAGGCACCGGGGGAATCGGTGCCTTTTTATTATCTGGTTTGTCAGGAATCTGGCATGTTGTTGTTTTTCACAAACAACGTCAGCTTATCGc                                         >  2:2464583/1‑99 (MQ=255)

                                                           aataaaAAAGGCACCGGGGGAATCGGTGCCTTTTTATTATCTGGTTTGTCAGGAATCTGGCATGTTGTTGTTTTTCACAAACAACGTCAGCTTATCGcc                                        >  2:154981/1‑99 (MQ=255)

                                                            ataaaAAAGGCACCGGGGGAATCGGTGCCTTTTTATTATCTGGTTTGTCAGGAATCTGGCATGTTGTTGTTTTTCACAAACAACGTCAGCTTATCGCCt                                       >  2:1614108/1‑99 (MQ=255)

                                                            ataaaAAAGGCACCGGGGGAATCGGTGCCTTTTTATTATCTGGTTTGTCAGGAATCTGGCATGTTGTTGTTTTTCACAAACAACGTCAGCTTATCGCCt                                       >  1:911250/1‑99 (MQ=255)

                                                            ataaaAAAGGCACCGGGGGAATCGGTGCCTTTTTATTATCTGGTTTGTCAGGAATCTGGCATGTTGTTGTTTTTCACAAACAACGTCAGCTTATCGCCt                                       <  1:3144338/99‑1 (MQ=255)

                                                            ataaaAAAGGCACCGGGGGAATCGGTGCCTTTTTATTATCTGGTTTGTCAGGAATCTGGCATGTTGTTGTTTTTCACAAACAACGTCAGCTTATCGCCt                                       <  2:192884/99‑1 (MQ=255)

                                                            ataaaAAAGGCACCGGGGGAATCGGTGCCTTTTTATTATCTGGTTTGTCAGGAATCTGGCATGTTGTTGTTTTTCACAAACAACGTCAGCTTATCGCCt                                       >  1:1343648/1‑99 (MQ=255)

                                                             taaaAAAGGCACCGGGGGAATCGGTGCCTTTTTATTATCTGGTTTGTCAGGAATCTGGCATGTTGTTGTTTTTCACAAACAACGTCAGCTTATCGCCTg                                      <  1:3465893/99‑1 (MQ=255)

                                                             taaaAAAGGCACCGGGGGAATCGGTGCCTTTTTATTATCTGGTTTGTCAGGAATCTGGCATGTTGTTGTTTTTCACAAACAACGTCAGCTTATCGCCTg                                      >  1:2808869/1‑99 (MQ=255)

                                                             taaaAAAGGCACCGGGGGAATCGGTGCCTTTTTATTATCTGGTTTGTCAGGAATCTGGCATGTTGTTGTTTTTCACAAACAACGTCAGCTTATCGCCTg                                      >  1:145738/1‑99 (MQ=255)

                                                              taaaaaGGCACCGGGGGAATCGGTGCCTTTTTATTATCTGGTTTGTCAGGAATCTGGCATGTTGTTGTTTTTCACAAACAACGTCAGCTTATCGCCTgg                                     >  2:162403/2‑99 (MQ=255)

                                                              aaaaaaGGCACCGGGGGAATCGGAGCCTTTTTATTATCTGGTTTGTCAGGAATCTGGCATGTTGTTGTTTTTCACAAACAACGTCAGCTTATCGCCTgg                                     <  2:1621013/99‑1 (MQ=255)

                                                                 aaaGGCACCGGGGGAATCGGTGCCTTTTTATTATCTGGTTTGTCAGGAATCTGGCATGTTGTTGTTTTTCACAAACAACGTCAGCTTATCGCCTGGTTg                                  >  1:1037584/1‑99 (MQ=255)

                                                                  aaGGCGCCGGGGGAAGCGGTGCCTTTTTATTATCTGGTTTGTCAGGAATCTGGCATGTTGTTGTTTTTCACAAACAACGTCAGCTTATCGCCTGGTTGc                                 <  2:143508/99‑1 (MQ=255)

                                                                  aaGGCACCGGGGGAATCGGTGCCTTTTTATTATCTGGTTTGTCAGGAATCTGGCATGTTGTTGTTTTTCACAAACAACGTCAGCTTATCGCCTGGTTGc                                 <  1:2630624/99‑1 (MQ=255)

                                                                     gCACCGGGGGAATCGGTGCCTTTTTATTATCTGGTTTGTCAGGAATCTGGCATGTTGTTGTTTTTCACAAACAACGTCAGCTTATCGCCTGGTTGCAGa                              <  2:2243903/99‑1 (MQ=255)

                                                                       aCCGGGGGAATCGGTGCCTTTTTATTATCTGGTTTGTCAGGAATCTGGCATGTTGTTGTTTTTCACAAACAACGTCAGCTTATCGCCTGGTTGCAGAtt                            <  2:1174591/99‑1 (MQ=255)

                                                                        ccGGGGGAATCGGTGCCTTTTTATTATCTGGTTTGTCAGGAATCTGGCATGTTGTTGTTTTTCACAAACAACGTCAGCTTATCGCCTGGTTGCAGATTc                           <  2:3378482/99‑1 (MQ=255)

                                                                            gggAATCGGTGCCTTTTTATTATCTGGTTTGTCAGGAATCTGGCATGTTGTTGTTTTGCACAAACAACGTCAGCTTATCGCCTGGTTGCAGATTCGCAg                       >  2:237159/1‑99 (MQ=255)

                                                                               aaTCGGTGCCTTTTTATTATCTGGTTTGTCAGGAATCTGGCATGTTGTTGTTTTTCACAAACAACGTCAGCTTATCGCCTGGTTGCAGATTCGCAgtgt                    >  1:209374/1‑99 (MQ=255)

                                                                                 tCGGTGCCTATTTATTATCTGGTGTGTAAGGAATCTGGCATGTTGTTGTTCTTGAAAAACATCGTTAGCTAATCTCCTGGTTGCAGAGTCGCAgtcttg                  >  2:2260491/1‑95 (MQ=255)

                                                                                   ggTGCCTTTTTATTATCTGGTTTGTCAGGAATCTGGCATGTTGTTGTTTTTCACAAACAACGTCAGCTTATCGCCTGGTTGCAGATTCGCAGTGTCGCt                <  2:509807/99‑1 (MQ=255)

                                                                                   ggTGCCTTTTTATTATCTGGTTTGTCAGGAATCTGGCATGTTGTTGTTTTTCACAAACAACGTCAGCTTATCGCCTGGTTGCAGATTCGCAGTGTCGCt                <  1:1469570/99‑1 (MQ=255)

                                                                                    gTGCCTTTTTATTATCTGGTTTGTCAGGAATCTGGCATGTTGTTGTTTTTCACAAACAACGTCAGCTTATCGCCTGGTTGCAGATTCGCAGTGTCGCTg               >  2:553552/1‑99 (MQ=255)

                                                                                    gTGCCTTTTTATTATCTGGTTTGTCAGGAATCTGGCATGTTGTTGTTTTTCACAAACAACGTCAGCTTATCGCCTGGTTGCAGATTCGCAGTGTCGCTg               >  1:21270/1‑99 (MQ=255)

                                                                                     tGCCTTTTTATTATCTGGTTTGTCAGGAATCTGGCATGTTGTTGTTTTTCACAAACAACGTCAGCTTATCGCCTGGTTGCAGATTCGCAGTGTCGCTGt              >  1:68370/1‑99 (MQ=255)

                                                                                       ccTTTTTATTATCTGGTTTGTCAGGAATCTGGCATGTTGTTGTTTTTCACAAACAACGTCAGCTTATCGCCTGGTTGCAGATTCGCAGTGTCGCTGTTc            >  1:2005815/1‑99 (MQ=255)

                                                                                       ccTTTTTATTATCTGGTTTGTCAGGAATCTGGCATGTTGTTGTTTTTCACAAACAACGTCAGCTTATCGCCTGGTTGCAGATTCGCAGTGTCGCTGTTc            <  2:1019233/99‑1 (MQ=255)

                                                                                       ccTTTTTATTATCTGGTTTGTCAGGAATCTGGCATGTTGTTGTTTTTCACAAACAACGTCAGCTTATCGCCTGGTTGCAGATTCGCAGTGTCGCTGTTc            >  2:2719750/1‑99 (MQ=255)

                                                                                       ccTTTTTATTATCTGGTTTGTCAGGAATCTGGCATGTTGTTGTTTTTCACAAACAACGTCAGCTTATCGCCTGGTTACAGATTCGCAGTGTCGCTGTTc            >  2:1261696/1‑99 (MQ=255)

                                                                                        cTTTTTATTATCTGGTTTGTCAGGAATCTGGCATGTTGTTGTTTTTCACAAACAACGTCAGCTTATCGCCTGGTTGCAGATTCGCAGTGTCGCTGTTcc           <  2:1082056/99‑1 (MQ=255)

                                                                                        cTTTTTATTATCTGGTTTGTCAGGAATCTGGCATGTTGTTGTTTTTCACAAACAACGTCAGCTTATCGCCTGGTTGCAGATTCGCAGTGTCGCTGTTcc           >  2:357132/1‑99 (MQ=255)

                                                                                        cTTTTTATTATCTGGTTTGTCAGGAATCTGGCATGTTGTTGTTTTTCACAAACAACGTCAGCTTATCGCCTGGTTGCAGATTCGCAGTGTCGCTGTTcc           >  1:1466829/1‑99 (MQ=255)

                                                                                        cTTTTTATTATCTGGTTTGTCAGGAATCTGGCATGTTGTTGTTTTTCACAAACAACGTCAGCTTATCGCCTGGTTGCAGATTCGCAGTGTCGCTGTTcc           >  1:1265442/1‑99 (MQ=255)

                                                                                         tttttATTATCTGGTTTGTCAGGAATCTGGCATGTTGTTGTTTTTCACAAACAACGTCAGCTTATCGCCTGGTTGCAGATTCGCAGTGTCGCTGTTCCa          >  2:3019334/1‑99 (MQ=255)

                                                                                         tttttATTATCTGGTTTGTCAGGAATCTGGCATGTTGTTGTTTTTCACAAACAACGTCAGCTTATCGCCTGGTTGCAGATTCGCAGTGTCGCTGTTCCa          >  2:2725668/1‑99 (MQ=255)

                                                                                         tttttATTATCTGGTTTGTCAGGAATCTGGCATGTTGTTGTTTTTCACAAACAACGTCAGCTTATCGCCTGGTTGCAGATTCGCAGTGTCGCTGTTCCa          >  2:551950/1‑99 (MQ=255)

                                                                                           tttATTATCTGGTTTGTCAGGAATCTGGCATGTTGTTGTTTTTCACAAACAACGTCAGCTTATCGCCTGGTTGCAGATTCGCAGTGTCGCTGTTCCAgc        >  2:2792090/1‑99 (MQ=255)

                                                                                             tattatCGGGTTTGTCAGGAATCTGGCATGTTGTTGTTTTTCACAAACAACGTCAGCTTATCGCCTGGTTGCAGATTCGCAGTGTCGCTGTTCCAgcgc      >  2:353082/1‑99 (MQ=255)

                                                                                              tctatCTGGTTTGTCAGGAATCTGGCATGTTGTTGTTTTTCACAAACAACGTCAGCTTATCGCCTGGTTGCAGATTCGCAGTGTCGCTGTTCCAGCGCa     <  1:1389941/97‑1 (MQ=255)

                                                                                               ttatCTGGTTTGTCAGGAATCTGGCATGTTGTTGTTTTTCACAAACAACGTCAGCTTATCGCCTGGTTGCAGATTCGCAGTGTCGCTGTTCCAGCGCAt    <  2:80713/99‑1 (MQ=255)

                                                                                                 atCTGGTTTGTCAGGAATCTGGCATGTTGTTGTTTTTCACAAACAACGTCAGCTTATCTCCTGGTTGCAGATTCGCAGTGTCGCTGTTCCAGCGCATca  >  1:3073486/1‑99 (MQ=255)

CAGAATGATGGCTTTTTCACCAGTGATATCATCATGGTAGATGCACATAAAGCGGCATAAATAAAAAAGGCACCGGGGGAATCGGTGCCTTTTTATTATCTGGTTTGTCAGGAATCTGGCATGTTGTTGTTTTTCACAAACAACGTCAGCTTATCGCCTGGTTGCAGATTCGCAGTGTCGCTGTTCCAGCGCATCA  >  NC_000913/232490‑232685

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.