mutation predictions | marginal predictions | summary statistics | genome diff | command line log
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breseq version 0.33.1 revision 8505477f25b3
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Marginal new junction evidence (lowest skew 10 of 77 shown) | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 4638146 | 152 (1.240) | 3 (0.030) | 3/230 | NT | 2.0% | intergenic (+26/‑32) | creC/creD | sensory histidine kinase in two‑component regulatory system with CreB or PhoB/inner membrane protein |
| ? | NC_000913 | = 4638170 | 156 (1.400) | intergenic (+50/‑8) | creC/creD | sensory histidine kinase in two‑component regulatory system with CreB or PhoB/inner membrane protein | |||||
| * | ? | NC_000913 | = 4551007 | 89 (0.730) | 4 (0.030) | 4/236 | NT | 4.5% | coding (290/1344 nt) | gntP | fructuronate transporter |
| ? | NC_000913 | = 4551030 | 87 (0.760) | coding (267/1344 nt) | gntP | fructuronate transporter | |||||
| * | ? | NC_000913 | 4486252 = | 99 (0.810) | 3 (0.030) | 3/236 | NT | 3.3% | coding (35/1101 nt) | lptF | lipopolysaccharide export ABC permease |
| ? | NC_000913 | 4486291 = | 84 (0.730) | coding (74/1101 nt) | lptF | lipopolysaccharide export ABC permease | |||||
| * | ? | NC_000913 | 4417551 = | 128 (1.050) | 3 (0.030) | 3/240 | NT | 2.2% | coding (600/750 nt) | yjfP | acyl CoA esterase |
| ? | NC_000913 | 4417584 = | 139 (1.190) | coding (633/750 nt) | yjfP | acyl CoA esterase | |||||
| * | ? | NC_000913 | = 4415329 | 121 (0.990) | 5 (0.040) | 5/244 | NT | 4.0% | coding (1055/1626 nt) | aidB | DNA alkylation damage repair protein; flavin‑containing DNA binding protein, weak isovaleryl CoA dehydrogenase |
| ? | NC_000913 | = 4415338 | 121 (1.020) | coding (1064/1626 nt) | aidB | DNA alkylation damage repair protein; flavin‑containing DNA binding protein, weak isovaleryl CoA dehydrogenase | |||||
| * | ? | NC_000913 | 4389174 = | 124 (1.010) | 4 (0.030) | 4/238 | NT | 3.3% | coding (197/3324 nt) | mscM | mechanosensitive channel protein, miniconductance |
| ? | NC_000913 | 4389211 = | 119 (1.030) | coding (160/3324 nt) | mscM | mechanosensitive channel protein, miniconductance | |||||
| * | ? | NC_000913 | 4330135 = | 125 (1.020) | 5 (0.040) | 5/244 | NT | 3.9% | coding (776/879 nt) | yjcZ | YjcZ family protein; yhjH motility defect suppressor |
| ? | NC_000913 | 4330163 = | 125 (1.060) | coding (804/879 nt) | yjcZ | YjcZ family protein; yhjH motility defect suppressor | |||||
| * | ? | NC_000913 | 4302340 = | 124 (1.010) | 4 (0.030) | 4/242 | NT | 3.4% | coding (739/2052 nt) | mdtO | membrane translocase (MDR) of MdtNOP efflux pump, PET family |
| ? | NC_000913 | 4302402 = | 108 (0.920) | coding (677/2052 nt) | mdtO | membrane translocase (MDR) of MdtNOP efflux pump, PET family | |||||
| * | ? | NC_000913 | 4129541 = | 78 (0.640) | 3 (0.030) | 3/240 | NT | 3.9% | coding (870/1161 nt) | metB | cystathionine gamma‑synthase, PLP‑dependent |
| ? | NC_000913 | 4129565 = | 72 (0.620) | coding (894/1161 nt) | metB | cystathionine gamma‑synthase, PLP‑dependent | |||||
| * | ? | NC_000913 | = 4013353 | 152 (1.240) | 3 (0.030) | 3/240 | NT | 2.0% | coding (301/2262 nt) | metE | 5‑methyltetrahydropteroyltriglutamate‑ homocysteine S‑methyltransferase |
| ? | NC_000913 | = 4013396 | 145 (1.250) | coding (344/2262 nt) | metE | 5‑methyltetrahydropteroyltriglutamate‑ homocysteine S‑methyltransferase | |||||