New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 1254732	145 (1.050)	12 (0.090)	9/210	NT	8.0%	coding (1221/2868 nt)	ycgV	putative adhesin
	?	NC_000913	= 1254742	142 (1.110)					coding (1211/2868 nt)	ycgV	putative adhesin

GGTGCATATCCAGATTGATTAGCCCACCTTTGGAAAGAACGCTACCGTTGATAAGCATACGACCCGAGGCGTTGATGCGGCTGGCGGCATAACCATCGTCATGTTGCGTTGCGATGGCCATCTGGTCGGGTGTACTCATATCAATGACCAGATCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/1254578‑1254732 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccagatcgACCTCACGAG‑‑CGATCTGGTCATTGATATGAGTACACCCGACCAGATGGCCATCGCAACGCAACATGACGATGGTTATGCCGCCAGCCGCATCAACGCCTCGGGTCGTATGCTTATCAACGGTAGCGTTCTTTCCAAAGGTGGGCTAAT  <  NC_000913/1254742‑1254595                                                                                                                                                                                                                                                                                                                   GGTGCATATCCAGATTGATTAGCCCACCTTTGGAAAGAACGCTACCGTTGATAAGCATACGACCCGAGGCGTTGATGCGGCTGGCGGCATAACCATCGTCATGTTGCGTTGCGATGGCCATCTGGTCGGGTGTACTCATATCAATGACC                                                                                                                                                              <  4:33669/149‑1  GTGCATATCCAGATTGATTAGCCCACCTTTGGAAAGAACGCTACCGTTGATAAGCATACGACCCGAGGCGTTGATGCGGCTGGCGGCATAACCATCGTCATGTTGCGTTGCGATGGCCATCTGGTCGGGTGTACTCATATCAATGACCA                                                                                                                                                             <  3:935999/149‑1    GCATATCCAGATTGATTAGCCCACCTTTGGAAAGAACGCTACCGTTGATAAGCATACGACCCGAGGCGTTGATGCGGCTGGCGGCATAACCATCGTCATGTTGCGTTGCGATGGCCATCTGGTCGGGTGTACTCATATCAATGACCAGA                                                                                                                                                           >  3:306540/1‑149       TATCCAGATTGATTAGCCCACCTTTGGAAAGAACGCTACCGTTGATAAGCATACGACCCGAGGCGTTGATGCGGCTGGCGGCATAACCATCGTCATGTTGCGTTGCGATGGCCATCTGGTCGGGTGTACTCATATCAATGACCAGATCG                                                                                                                                                        >  2:366024/1‑149             GATTGATTAGCCCACCTTTGGAAAGAACGCTACCGTTGATAAGCATACGACCCGAGGCGTTGATGCGGCTGGCGGCATAACCATCGTCATGTTGCGTTGCGATGGCCATCTGGTCGGGTGTACTCATATCAATGACCAGATCGACCTCA                                                                                                                                                  >  2:571337/1‑149             GATTGATTAGCCCACCTTTGGAAAGAACGCTACCGTTGATAAGCATACGACCCGAGGCGTTGATGCGGCTGGCGGCATAACCATCGTCATGTTGCGTTGCGATGGCCATCTGGTCGGGTGTACTCACATCAATGACCAGATC                                                                                                                                                         >  1:1254804/1‑142             GATTGATTAGCCCACCTTTGGAAAGAACGCTACCGTTGATAAGCATACGACCCGAGGCGTTGATGCGGCTGGCGGCATAACCATCGCCATGTTGCGTTGCGATGGCCATCTGGTCGGGTGTACTCATATCAATGACCAGATC                                                                                                                                                         <  2:1254804/142‑1                        CCACCTTTGGAAAGAACGCTACCGTTGATAAGCATACGACCCGAGGCGTTGATGCGGCTGGCGGCATAACCATCGTCATGTTGCGTTGCGATGGCCATCTGGTCGGGTGTACTCATATCAATGACCAGATCGACCTCACGAG‑‑CGATCTG                                                                                                                                     <  1:1043740/149‑1                        CCACCTTTGGAAAGAACGCTACCGTTGATAAGCATACGACCCGAGGCGTTGATGCGGCTGGCGGCATAACCATCGTCATGTTGCGTTGCGATGGCCATCTGGTCGGGTGTACTCATATCAATGACCAGATCGACCTCACGAG‑‑CGATCTG                                                                                                                                     <  4:12209/149‑1                        CCACCTTTGGAAAGAACGCTACCGTTGATAAGCATACGACCCGAGGCGTTGATGCGGCTGGCGGCATAACCATCGTCATGTTGCGTTGCGATGGCCATCTGGTCGGGTGTACTCATATCAATGACCAGATCGACCTCACGAG‑‑CGATCTG                                                                                                                                     <  1:571337/149‑1                            CTTTGGAAAGAACGCTACCGTTGATAAGCATACGACCCGAGGCGTTGATGCGGCTGGCGGCATAACCATCGTCATGTTGCGTTGCGATGGCCATCTGGTCGGGTGTACTCATATCAATGACCAGATC                                                                                                                                                         >  2:1258387/1‑127                            CTTTGGAAAGAACGCTACCGTTGATAAGCATACGACCCGAGGCGTTGATGCGGCTGGCGGCATAACCATCGTCATGTTGCGTTGCGATGGCCATCTGGTCGGGTGTACTCATATCAATGACCACATC                                                                                                                                                         <  1:1258387/127‑1                                 GAAAGAACGCTACCGTTGATAAGCATACGACCCGAGGCGTTGATGCGGCTGGCGGCATAACCATCGTCATGTTGCGTTGCGATGGCCATCTGGTCGGGTGTACTCATATCAATGACCAGATCGACCTCACGAG‑‑CGATCTGGTC                                                                                                                                  <  2:3215/143‑1                                 GAAAGAACGCTACCGTTGATAAGCATACGACCCGAGGCGTTGATGCGGCTGGCGGCATAACCATCGTCATGTTGCGTTGCGATGGCCATCTGGTCGGGTGTACTCATATCAATGACCAGATCGACCTCACGAG‑‑CGATCTGGTC                                                                                                                                  >  1:3215/1‑143                                               GTTGATAAGCATACGACCCGAGGCGTTGATGCGGCTGGCGGCATAACCATCGTCATGTTGCGTTGCGATGGCCATCTGGTCGGGTGTACTCATATCAATGACCAGATCGACCTCACGAG‑‑CGATCTGGTC                                                                                                                                  <  1:415904/129‑1                                               GTTGATAAGCATACGACCCGAGGCGTTGATGCGGCTGGCGGCATAACCATCGTCATGTTGCGTTGCGATGGCCATCTGGTCGGGTGTACTCATATCAATGACCAGATCGACCTCACGAG‑‑CGATCTGGTC                                                                                                                                  >  2:415904/1‑129                                                                                      gcCATAACCATCGTCATGTTGCGTTGCGATGGCCATCTGGTCGGGTGTACTCATATCAATGACCAGATCGACCTAACGAG‑‑CGATCTGGTCATTGAT                                                                                                                            <  3:1285593/94‑1                                                                                      GGCATAACCATCGTCATGTTGCGTTGCGATGGCCATCTGGTCGGGTGTACTCATATCAATGACCAGATCGACCTCACGAG‑‑CGATCTGGTCATTGAT                                                                                                                            >  4:1285593/1‑96                                                                                                                                          ATATCAATGACCAGATCG‑‑CTCGTGAGGTCGATCTGGTCATTGATATGAGTACACCCGACCAGATGGCCATCGCAACGCAACATGACGATGGTTATGCCGCCAGCCGCATCAAC                                                       <  4:1049769/113‑1                                                                                                                                          ATATCAATGACCAGATCG‑‑CTCGTGAGGTCGATCTGGTCATTGATATGAGTACACCCGACCAGATGGCCATCGCAACGCAACATGACGATGGTTATGCCGCCAGCCGCATCAAC                                                       >  3:1049769/1‑113                                                                                                                                                    CCAGATCGACCTCACGAG‑‑CGATCTGGTCATTGATATGAGTACACCCGACCAGATGGCCATCGCAACGCAACATGACGATGGTTATGCCGCCAGCCGCATCAACGCCTCGGGTCGTATGCTTATCAACGGTAGCGTTCTTTCCAAAGGTG         >  4:1436548/1‑149                                                                                                                                                    CCAGATCGACCTCACGAG‑‑CGATCTGGTCATTGATATGAGTACACCCGACCAGATGGCCATCGCAACGCAACATGACGATGGTTATGCCGCCAGCCGCATCAACGCCTCGGGTCGTATGCTTATCAACGGTAGCGTTCTTTCCAAAGGTG         >  2:1404625/1‑149                                                                                                                                                    CCAGATCGACCTCACGAG‑‑CGATCTGGTCATTGATATGAGTACACCCGACCAGATGGCCATCGCAACGCAACATGACGATGGTTATGCCGCCAGCCGCATCAACGCCTCGGGTCGTATGCTTATCAACGGTAGCGTTCTTTCCAAAGGTG         >  3:1135699/1‑149                                                                                                                                                    CCAGATCGACCTCACGAG‑‑CGATCTGGTCATTGATATGAGTACACCCGACCAGATGGCCATCGCAACGCAACATGACGATGGTTATGCCGCCAGCCGCAT                                                           >  4:793293/1‑99                                                                                                                                                    CCAGATCGACCTCACGAG‑‑CGATCTGGTCATTGATATGAGTACACCCGACCAGATGGCCATCGCAACGCAACATGACGATGGTTATGCCGCCAGCCGCAT                                                           <  3:793293/99‑1                                                                                                                                                    CCAGATCGACCTCACGAG‑‑CGATCTGGTCATTGATATGAGTACACCCGACCAGATGGCCATCGCAACGCAAC                                                                                       <  3:612748/71‑1                                                                                                                                                    CCAGATCGACCTCACGAG‑‑CGATCTGGTCATTGATATGAGTACACCCGACCAGATGGCCATCGCAACGCAAC                                                                                       >  4:612748/1‑71                                                                                                                                                    CCAGATCGACCTCACGAG‑‑CGATCTGGTCATTGATATGAGTACACCCGACCAGA                                                                                                         >  2:1011775/1‑53                                                                                                                                                    CCAGATCGACCTCACGAG‑‑CGATCTGGTCATTGATATGAGTACACCCGACCAGA                                                                                                         <  1:1011775/53‑1                                                                                                                                                     CAGATCGACCTCACGAG‑‑CGATCTGGTCATTGATATGAGTACACCCGACCAGATGGCCATCGCAACGCAACATGACGATGGTTATGCCGCCAGCCGCATCAACGCCTCGGGTCGTATGCTTATCAACGGTAGCGTTCTTTCCAAAGGTGG        <  1:1404625/149‑1                                                                                                                                                      AGATCGACCTCACGAG‑‑CGATCTGGTCATTGATATGAGTACACCCGACCAGATGGCCATCGCAACGCAACATGACGATGGTTATGCCGCCAGCCGCATCAACGCCTCGGGTCGTATGCTTATCAACGGTAGCGTTCTTTCCAAAGGTGGG       >  3:765323/1‑149                                                                                                                                                       GATCGACCTCACGAG‑‑CGATCTGGTCATTGATATGAGTACACCCGACCAGATGGCCATCGCAACGCAACATGACGATGGTTATGCCGCCAGCCGCATCAACGCCTCGGGTCGTATGCTTATCAACGGTAGCGTTCTTTCCAAAGGTG         >  3:284676/1‑146                                                                                                                                                       GATCGACCTCACGAG‑‑CGATCTGGTCATTGATATGAGTACACCCGACCAGATGGCCATCGCAACGCAACATGACGATGGTTATGCCGCCAGCCGCATCAACGCCTCGGGTCGTATGCTTATCAACGGTAGCGTTCTTTCCAAAGGTG         <  4:284676/146‑1                                                                                                                                                       GATCGACCTCACGAG‑‑CGATCTGGTCATTGATATGAGTACACCCGACCAGATGGCCATCGCAACGCAACATGACGATGGTTATGCCGCCAGCCGCATCAACGCCTCGGGTCGTATGCTTATCAACGGTAGCGTTCTTTCCAAA             <  1:1313946/142‑1                                                                                                                                                       GATCGACCTCACGAG‑‑CGATCTGGTCATTGATATGAGTACACCCGACCAGATGGCCATCGCAACGCAACATGACGATGGTTATGCCGCCAGCCGCATCAACGCCTCGGGTCGTATGCTTATCAACGGTAGCGTTCTTTCCAAA             >  2:1313946/1‑142                                                                                                                                                        ATCGACCTCACGAG‑‑CGATCTGGTCATTGATATGAGTACACCCGACCAGATGGCCATCGCAACGCAACATGACGATGGTTATGCCGCCAGCCGCATCAACGCCTCGGGTCGTATGCTTATCAACGGTA                           <  2:578914/127‑1                                                                                                                                                        ATCGACCTCACGAG‑‑CGATCTGGTCATTGATATGAGTACACCCGACCAGATGGCCATCGCAACGCAACATGACGATGGTTATGCCGCCAGCCGCATCAACGCCTCGGGTCGTATGCTTATCAACGGTA                           >  1:578914/1‑127                                                                                                                                                           GACCTCACGAG‑‑CGATCTGGTCATTGATATGAGTACACCCGACCAGATGGCCATCGCAACGCAACATGACGATGGTTATGCCGCCAGCCGCATCAACGCCTCGGGTCGTATGCTTATCAACGGTAGCGTTCTTTCCAAAGGTGGGCTAAT  <  1:237787/149‑1                                                                                                                                                                                                                                                                                                                   GGTGCATATCCAGATTGATTAGCCCACCTTTGGAAAGAACGCTACCGTTGATAAGCATACGACCCGAGGCGTTGATGCGGCTGGCGGCATAACCATCGTCATGTTGCGTTGCGATGGCCATCTGGTCGGGTGTACTCATATCAATGACCAGATCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/1254578‑1254732 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccagatcgACCTCACGAG‑‑CGATCTGGTCATTGATATGAGTACACCCGACCAGATGGCCATCGCAACGCAACATGACGATGGTTATGCCGCCAGCCGCATCAACGCCTCGGGTCGTATGCTTATCAACGGTAGCGTTCTTTCCAAAGGTGGGCTAAT  <  NC_000913/1254742‑1254595

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.