mutation predictions | marginal predictions | summary statistics | genome diff | command line log
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breseq version 0.33.1 revision 8505477f25b3
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Marginal new junction evidence (lowest skew 10 of 29 shown) | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 4567048 = | 83 (0.840) | 3 (0.030) | 3/254 | NT | 4.0% | coding (199/1281 nt) | yjiN | zinc‑type alcohol dehydrogenase‑like protein |
| ? | NC_000913 | 4567102 = | 65 (0.680) | coding (145/1281 nt) | yjiN | zinc‑type alcohol dehydrogenase‑like protein | |||||
| * | ? | NC_000913 | 4406380 = | 139 (1.400) | 4 (0.040) | 3/258 | NT | 3.0% | coding (191/426 nt) | nsrR | nitric oxide‑sensitive repressor for NO regulon |
| ? | NC_000913 | 4406408 = | 121 (1.250) | coding (219/426 nt) | nsrR | nitric oxide‑sensitive repressor for NO regulon | |||||
| * | ? | NC_000913 | 4203248 = | 96 (0.970) | 4 (0.040) | 4/250 | NT | 4.4% | coding (1323/1398 nt) | zraS | sensory histidine kinase in two‑component regulatory system with ZraR |
| ? | NC_000913 | 4203288 = | 82 (0.870) | coding (1363/1398 nt) | zraS | sensory histidine kinase in two‑component regulatory system with ZraR | |||||
| * | ? | NC_000913 | 4201852 = | 106 (1.070) | 4 (0.040) | 4/252 | NT | 4.0% | intergenic (‑164/‑74) | zraP/zraS | Zn‑dependent periplasmic chaperone/sensory histidine kinase in two‑component regulatory system with ZraR |
| ? | NC_000913 | 4201871 = | 93 (0.980) | intergenic (‑183/‑55) | zraP/zraS | Zn‑dependent periplasmic chaperone/sensory histidine kinase in two‑component regulatory system with ZraR | |||||
| * | ? | NC_000913 | = 3795026 | 345 (3.480) | 12 (0.130) | 8/248 | NT | 3.5% | coding (98/1047 nt) | waaF | ADP‑heptose:LPS heptosyltransferase II |
| ? | NC_000913 | = 3795059 | 338 (3.630) | coding (131/1047 nt) | waaF | ADP‑heptose:LPS heptosyltransferase II | |||||
| * | ? | NC_000913 | = 3779138 | 378 (3.820) | 19 (0.200) | 13/248 | NT | 5.0% | coding (85/777 nt) | lldR | dual role activator/repressor for lldPRD operon |
| ? | NC_000913 | = 3779144 | 374 (4.020) | coding (91/777 nt) | lldR | dual role activator/repressor for lldPRD operon | |||||
| * | ? | NC_000913 | = 3762197 | 337 (3.400) | 6 (0.060) | 5/256 | NT | 1.8% | coding (15/4134 nt) | rhsA | Rhs protein with putative toxin 55 domain; putative polysaccharide synthesis/export protein; putative neighboring cell growth inhibitor |
| ? | NC_000913 | = 3762229 | 339 (3.530) | coding (47/4134 nt) | rhsA | Rhs protein with putative toxin 55 domain; putative polysaccharide synthesis/export protein; putative neighboring cell growth inhibitor | |||||
| * | ? | NC_000913 | 3761065 = | 422 (4.260) | 3 (0.030) | 3/250 | NT | 0.69% | coding (185/1392 nt) | selA | selenocysteine synthase |
| ? | NC_000913 | 3761155 = | 462 (4.930) | coding (95/1392 nt) | selA | selenocysteine synthase | |||||
| * | ? | NC_000913 | = 3741345 | 406 (4.100) | 4 (0.040) | 4/254 | NT | 0.98% | coding (238/474 nt) | ysaA | putative hydrogenase, 4Fe‑4S ferredoxin‑type component |
| ? | NC_000913 | = 3741370 | 421 (4.420) | coding (213/474 nt) | ysaA | putative hydrogenase, 4Fe‑4S ferredoxin‑type component | |||||
| * | ? | NC_000913 | 3736656 = | 431 (4.350) | 5 (0.050) | 5/244 | NT | 1.2% | coding (522/825 nt) | bax | putative glucosaminidase |
| ? | NC_000913 | = 3736652 | 412 (4.500) | coding (526/825 nt) | bax | putative glucosaminidase | |||||