New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 4096011 =142 (1.210)4 (0.040) 4/250 NT 2.9% coding (1438/1470 nt) rhaB rhamnulokinase
?NC_000913 4096045 = 129 (1.160)coding (1404/1470 nt) rhaB rhamnulokinase
Rejected: Frequency below/above cutoff threshold.

Only 100 of 157 total aligned reads displayed.

CCAGCAGTGCATTGAAACGGGTAAACGATCAAGTTGGCGCAGCGCCTCCTCGACATCAATCCCCACCGCCGCGAAACGCTGTTTCGCTAGCTCCCAGGCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGG‑GCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCGCGGTGGTGCTGACGACCTGACGGAAATCATCCACATTGTTGAGTTCATCCAGCGTCATTAACTGGATGCCGATATTGCCGA  >  NC_000913/4095863‑4096157
                                                                                                                                                    |                                                                                                                                                   
 cgggtgatcgccgggcctgttgaagcctcgacgctcggcaatatcggcatccagttaatgacgctggatgaactcaacaatgtggatgatttccgtcaggtcgtcagcaccaccgcgaatctgaccacctttacccctaatcctgacAg                                                                                                                                                    >  4:960527‑M1/148‑149 (MQ=255)
   ggtgatcgccgggcctgttgaagcctcgacgctcggcaatatcggcatccagttaatgacgctggatgaactcaacaatgtggatgatttccgtcaggtcgtcagcaccaccgcgaatctgaccacctttacccctaatcctgacAGTg                                                                                                                                                  <  2:615660‑M1/4‑1 (MQ=255)
     agTGCATTGAAACGGGTAAACGATCAAGTTGGCGCAGCGCCTCCTCGACATCAATCCCCACCGCCGCGAAACGCTGTTTCGCTAGCTCCCAGGCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGaa                                                                                                                                                >  3:1032135/1‑149 (MQ=255)
          aTTGAAACGGGTAAACGATCAAGTTGGCGCAGCGCCTCCTCGACATCAATCCCCACCGCCGCGAAACGCTGTTTCGCTAGCTCCCAGGCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCGTTTGTCTGTCGTGTAGAGTGAGTATgc                                                                                                                                           >  4:679003/1‑149 (MQ=255)
          aTTGAAACGGGTAAACGATCAAGTTGGCGCAGCGCCTCCTCGACATCAATCCCCACCGCCGCGAAACGCTGTTTCGCTAGCTCCCAGGCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTgc                                                                                                                                           >  3:1015708/1‑149 (MQ=255)
          aTTGAAACGGGTAAACGATCAAGTTGGCGCAGCGCCTCCTCGACATCAATCCCCACCGCCGCGAAACGCTGTTTCGCTAGCTCCCAGGCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTgc                                                                                                                                           <  4:416241/149‑1 (MQ=255)
          aTTGAAACGGGTAAACGATCAAGTTGGCGCAGCGCCTCCTCGACATCAATCCCCACCGCCGCGAAACGCTGTTTCGCTAGCTCCCAGGCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTgc                                                                                                                                           >  1:357818/1‑149 (MQ=255)
           ttGAAACGGGTAAACGATCAAGTTGGCGCAGCGCCTCCTCGACATCAATCCCCACCGCCGCGAAACGCTGTTTCGCTAGCTCCCAGGCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTgcg                                                                                                                                          <  3:866765/149‑1 (MQ=255)
                  gggTAAACGATCAAGTTGGCGCAGCGCCTCCTCGACATCAATCCCCACCGCCGCGAAACGCTGTTTCGCTAGCTCCCAGGCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATa                                                                                                                                   >  1:935449/1‑149 (MQ=255)
                    gTAAACGATCAAGTTGGCGCAGCGCCTCCTCGACATCAATCCCCACCGCCGCGAAACGCTGTTTCGCTAGCTCCCAGGCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCCTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGt                                                                                                                                 <  3:570322/149‑1 (MQ=255)
                     tAAACGATCAAGTTGGTGCAGCGCCTCCTCGACATCAATCCCCACCGCCGCGAAACGCTGTTTCGCTAGCTCCCAGGCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTg                                                                                                                                <  1:664033/149‑1 (MQ=255)
                     tAAACGATCAAGTTGGCGCAGCGCCTCCTCGACATCAATCCCCACCGCCGCGAAACGCTGTTTCGCTAGCTCCCAGGCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTg                                                                                                                                >  2:902308/1‑149 (MQ=255)
                          gATCAAGTTGGCGCAGCGCCTCCTCGACATCAATCCCCACCGCCGCGAAACGCTGTTTCGCTAGCTCCCAGGCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGG‑GCaa                                                                                                                          >  4:630059/1‑149 (MQ=255)
                          gATCAAGTTGGCGCAGCGCCTCCTCGACATCAATCCCCACCGCCGCGAAACGCTGTTTCGCTAGCTCCCAGGCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGG‑GCaa                                                                                                                          >  3:906475/1‑149 (MQ=255)
                               aGTTGGCGCAGCGCCTCCTCGACATCAATCCCCACCGCCGCGAAACGCTGTTTCGCTAGCTCCCAGGCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGG‑GCAATTTCa                                                                                                                     <  1:508875/149‑1 (MQ=255)
                                 ttGGCGCAGCGCCTCCTCGACATCAATCCCCACCGCCGCGAAACGCTGTTTCGCTAGCTCCCAGGCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGG‑GCAATTTCACt                                                                                                                   <  3:836214/149‑1 (MQ=255)
                                      gcAGCGCCTCCTCGACATCAATCCCCACCGCCGCGAAACGCTGTTTCGCTAGCTCCCAGGCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGG‑GCAATTTCACTGTCAg                                                                                                              >  4:1011185/1‑149 (MQ=255)
                                           gcCTCCTCGACATCAATCCCCACCGCCGCGAAACGCTGTTTCGCTAGCTCCCAGGCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGG‑GCAATTTCACTGTCAGGATTa                                                                                                         <  3:213886/149‑1 (MQ=255)
                                            cctcccCGACATCAATCCCCACCGCCGCGAAACGCAGTTTCGCTAGCTCCCAGGCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCGCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGG‑GCAATTTCACTGTCAGGATTAg                                                                                                        <  2:54077/149‑1 (MQ=255)
                                             ctcctcGACATCAATCCCCACCGCCGCGAAACGCTGTTTCGCTAGCTCCCAGGCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGG‑GCAATTTCACTGTCAGGATTAgg                                                                                                       >  1:615660/1‑149 (MQ=255)
                                             ctcctcGACATCAATCCCCACCGCCGCGAAACGCTGTTTCGCTAGCTCCCAGGCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGG‑GCAATTTCACTGTCAGGATTAgg                                                                                                       <  4:893968/149‑1 (MQ=255)
                                              tcctcGACATCAATCCCCACCGCCGCGAAACGCTGTTTCGCTAGCTCCCAGGCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGG‑GCAATTTCa                                                                                                                     >  3:480426/1‑134 (MQ=255)
                                              tcctcGACATCAATCCCCACCGCCGCGAAACGCTGTTTCGCTAGCTCCCAGGCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGG‑GCAATTTCACTGTCAGGCTTAggg                                                                                                      >  4:613854/1‑149 (MQ=255)
                                              tcctcGACATCAATCCCCACCGCCGCGAAACGCTGTTTCGCTAGCTCCCAGGCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGG‑GCAATTTCACTGTCAGGATTAggg                                                                                                      >  2:743601/1‑149 (MQ=255)
                                              tcctcGACATCAATCCCCACCGCCGCGAAACGCTGTTTCGCTAGCTCCCAGGCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGG‑GCAATTTCACTGTCAGGATTAggg                                                                                                      <  4:367626/149‑1 (MQ=255)
                                              tcctcGACATCAATCCCCACCGCCGCGAAACGCTGTTTCGCTAGCTCCCAGGCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGG‑GCAATTTCACTGTCAGGATTAggg                                                                                                      >  2:1023370/1‑149 (MQ=255)
                                              tcctcGACATCAATCCCCACCGCCGCGAAACGCTGTTTCGCTAGCTCCCAGGCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGG‑GCAATTTCACTGTCAGGATTAggg                                                                                                      >  4:110059/1‑149 (MQ=255)
                                               cctcGACATCAATCCCCACCGCCGCGAAACGCTGTTTCGCTAGCTCCCAGGCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTaga                                                                                                                                                     <  1:582357/102‑1 (MQ=255)
                                                ctcGACATCAATCCCCACCGCCGCGAAACGCTGTTTCGCTAGCTCCCAGGCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGG‑GCAATTTCACTGTCAGGATTAGGGGt                                                                                                    <  1:515607/149‑1 (MQ=255)
                                                 tcGACATCAATCCCCACCGCCGCGAAACGCTGTTTCGCTAGCTCCCAGGCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGG‑GCAATTTCa                                                                                                                     <  2:962380/131‑1 (MQ=255)
                                                 tcGACATCAATCCCCACCGCCGCGAAACGCTGTTTCGCTAGCTCCCAGGCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGG‑GCAATTTCa                                                                                                                     >  1:962380/1‑131 (MQ=255)
                                                   gACATCAATCCCCACCGCCGCGAAACGCTGTTTCGCTAGCTCCCAGGCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGG‑GCAATTTCACTGTCAGGATTAGGGGTaaa                                                                                                 <  3:398271/149‑1 (MQ=255)
                                                    aCATCAATCCCCACCGCCGCGAAACGCTGTTTCGCTAGCTCCCAGGCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGG‑GCAATTTCACTGTCAGGATTAGGGGTAAAg                                                                                                <  2:919472/149‑1 (MQ=255)
                                                     cATCAATCCCCACCGCCGCGAAACGCTGTTTCGCTAGCTCCCAGGCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGG‑GCAATTTCACTGTCAGGATTAGGGGTAAAgg                                                                                               <  3:630059/149‑1 (MQ=255)
                                                       tCAATCCCCACCGCCGCGAAACGCTGTTTCGCTAGCTCCCAGGCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGG‑GCAATTTCACTGTCAGGATTAGGGGTAAAggtg                                                                                             <  1:1023370/149‑1 (MQ=255)
                                                       tCAATCCCCACCGCCGCGAAACGCTGTTTCGCTAGCTCCCAGGCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGG‑GCAATTTCACTGTCAGGATTAGGGGTAAAggtg                                                                                             <  2:532530/149‑1 (MQ=255)
                                                        cAATCCCCACCGCCGCGAAACGCTGTTTCGCTAGCTCCCAGGCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGG‑GCAATTTCACTGTCAGGATTAGGGGTAAAggtgg                                                                                            <  4:346034/149‑1 (MQ=255)
                                                         aaTCCCCACCGCCGCGAAACGCTGTTTCGCTAGCTCCCAGGCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGG‑GCAATTTCACTGTCAGGATTAGGGGTAAAggtggt                                                                                           >  1:315982/1‑149 (MQ=255)
                                                          aTCCCCACCGCCGCGAAACGCTGTTTCGCTAACTCCCAGGCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGG‑GCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTc                                                                                          >  2:271870/1‑149 (MQ=255)
                                                           tCCCCACCGCCGCGAAACGCTGTTTCGCTAGCTCCCAGGCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGG‑GCAATTTCACTGTCAGGATTAg                                                                                                        >  1:980371/1‑134 (MQ=255)
                                                           tCCCCACCGCCGCGAAACGCTGTTTCGCTAGCTCCCAGGCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGG‑GCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCa                                                                                         >  1:313100/1‑149 (MQ=255)
                                                            ccccACCGCCGCGAAACGCTGTTTCGCTAGCTCCCAGGCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGG‑GCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAg                                                                                        >  3:241595/1‑149 (MQ=255)
                                                            ccccACCGCCGCGAAACGCTGTTTCGCTAGCTCCCAGGCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGG‑GCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAg                                                                                        >  2:806067/1‑149 (MQ=255)
                                                                aCCGCCGCGAAACGCTGTTTCGCTAGCTCCCAGGCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGG‑GCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTc                                                                                    <  4:314341/149‑1 (MQ=255)
                                                                   gccgcGAAACGCTGTTTCGCTAGCTCCCAGGCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGG‑GCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTcgcg                                                                                 <  3:466312/149‑1 (MQ=255)
                                                                    ccgcGAAACGCTGTTTCGCTAGCTCCCAGGCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGG‑GCAATTTCACTGTCAg                                                                                                              <  4:1023784/119‑1 (MQ=255)
                                                                     agcgAAACAGCGTTTCGCTAGCTCCCAGGCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGG‑GCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCGCggt                                                                               >  3:302155/2‑149 (MQ=255)
                                                                      gcgAAACGCTGTTTCGCTAGCTCCCAGGCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGG‑GCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCGCggtg                                                                              <  3:706225/149‑1 (MQ=255)
                                                                         aaaCGCTGTTTCGCTAGCTCCAAGGCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGG‑GCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCGCGgtggtg                                                                           >  3:501424/1‑149 (MQ=255)
                                                                           aCGCTGTTTCGCTAGCTCCAAGGCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGG‑GCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCGCGGTGGTGCt                                                                         <  4:501424/149‑1 (MQ=255)
                                                                             gCTGTTTCGCTAGCTCCCAGGCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGG‑GCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCGCGGTGGTGCTga                                                                       <  4:471555/149‑1 (MQ=255)
                                                                                 tttCGCTAGCTCCCAGGCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGG‑GCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCGCGGTGGTGCTgacgac                                                                   <  4:776720/149‑1 (MQ=255)
                                                                                 tttCGCTAGCTCCCAGGCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGG‑GCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCGCGGTGGTGCTgacgac                                                                   <  1:743601/149‑1 (MQ=255)
                                                                                   tCGCTAGCTCCCAGGCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGG‑GCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCGCGGTGGTGCTGACGACCt                                                                 <  1:150064/149‑1 (MQ=255)
                                                                                   tCGCTAGCTCCCAGGCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAACCTGCGCCACATAGTGG‑GCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCGCGGTGGTGCTGACGACCt                                                                 <  3:99241/149‑1 (MQ=255)
                                                                                    cGCTAGCTCCCAGGCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGG‑GCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCGCGGTGGTGCTGACGACCTg                                                                <  2:435908/149‑1 (MQ=255)
                                                                                     gCTAGCTCCCAGGCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGG‑GCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCGCGGTGGTGCTGACGACCTGa                                                               >  1:196556/1‑149 (MQ=255)
                                                                                      cTAGCTCCCAGGCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGG‑GCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCGCGGTGGTGCTGACGACCTGAc                                                              >  2:398426/1‑149 (MQ=255)
                                                                                         gCTCCCAGGCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGG‑GCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCGCGGTGGTGCTGACGACCTGACGGa                                                           >  4:942739/1‑149 (MQ=255)
                                                                                          tttccgtcaggtcgtcagcaccaccgcgaatctgaccacctttacccctaatcctgacAGTGAATCTGCGCCACATAGTGG‑GCAATTTCa                                                                                                                     <  2:709160‑M1/32‑1 (MQ=255)
                                                                                          tttccgtcaggtcgtcagcaccaccgcgaatctgaccacctttacccctaatcctgacAGTGAATCTGCGCCACATAGTGG‑GCAATTTCa                                                                                                                     >  1:709160‑M1/59‑90 (MQ=255)
                                                                                            cccAGGCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGG‑GCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCGCGGTGGTGCTGACGACCTGACGGAAat                                                        >  3:299110/1‑149 (MQ=255)
                                                                                               aGGCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGG‑GCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCGCGGTGGTGCTGACGACCTGACGGAAatcat                                                     >  3:689401/1‑149 (MQ=255)
                                                                                                ggCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGG‑GCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGGTTCGCGGTGGTGCTGACGACCTGACGGAAatcatc                                                    <  1:246086/149‑1 (MQ=255)
                                                                                                ggCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGG‑GCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCGCGGTGGTGCTGACGACCTGACGGAAatcatc                                                    <  4:689401/149‑1 (MQ=255)
                                                                                                 gCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGCAGAGTGAATCTGCGCCACATAGTGG‑GCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCGCGGTGGTGCTGACGACCTGACGGAAATCATcc                                                   >  1:689117/1‑149 (MQ=255)
                                                                                                  ccTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGG‑GCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCGCGGTGGTGCTGACGACCTGACGGAAATCATCca                                                  <  4:498648/149‑1 (MQ=255)
                                                                                                   cTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGG‑GCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCGCGGTGGTGCTGACGACCTGACGGAAATCATCcac                                                 >  1:908518/1‑149 (MQ=255)
                                                                                                    tGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTg                                                                                                                                            <  1:800621/58‑1 (MQ=255)
                                                                                                    tGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTg                                                                                                                                            >  2:800621/1‑58 (MQ=255)
                                                                                                     gTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGG‑GCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCGCGGTGGTGCTGACGACCTGACGGAAATCATCCACAt                                               <  1:897806/149‑1 (MQ=255)
                                                                                                      ttCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGG‑GCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCGCGGTGGTGCTGACGACCTGACGGAAATCATCCACAtt                                              <  2:315982/149‑1 (MQ=255)
                                                                                                      ttCCAGTTGAGTGGTCATGCGCAAAGCTCC‑TTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGG‑GCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCGCGGTGGTGCTGACGACCTGACGGAAATCATCCACAttg                                             <  4:820354/149‑1 (MQ=255)
                                                                                                        ccAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGG‑GCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCGCGGTGGTGCTGACGACCTGACGGAAATCATCCACAttgt                                            <  4:1032135/149‑1 (MQ=255)
                                                                                                         cAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGG‑GCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCGCggt                                                                               <  4:189708/113‑1 (MQ=255)
                                                                                                         cAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGG‑GCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCGCGGTGGTGCTGACGACCTGACGGAAATCATCCACAttgtt                                           <  1:834753/149‑1 (MQ=255)
                                                                                                         cAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGG‑GCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCGCGGTGGTGCTGACGACCTGACGGAAATCATCCACAttgtt                                           <  2:614729/149‑1 (MQ=255)
                                                                                                         cAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGG‑GCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCGCGGTGGTGCTGACGACCTGACGGAAATCATCCACAttgtt                                           <  2:689117/149‑1 (MQ=255)
                                                                                                           gTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGG‑GCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCGCGGTGGTGCTGACGACCTGACGGAAATCATCCACATTGTTGa                                         <  2:260149/149‑1 (MQ=255)
                                                                                                            ttGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGG‑GCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCGCGGTGGTGCTGACGACCTGACGGAAATCATCCACATTGTTGAg                                        <  3:179099/149‑1 (MQ=255)
                                                                                                                  ggTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGG‑GCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCGCGGTGGTGCTGACGACCTGACGGAAATCATCCACATTGTTGAGTTCATc                                  <  1:590320/149‑1 (MQ=255)
                                                                                                                      aTGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGG‑GCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCGCGGTGGTGCTGACGACCTGACGGAAATCATCCACATTGTTGAGTTCATCCAGc                              >  2:280179/1‑149 (MQ=255)
                                                                                                                           cAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGG‑GCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCGCGGTGGTGCTGACGACCTGACGGAAATCATCCACATTGTTGAGTTCATCCAGCGTCAt                         <  4:368609/149‑1 (MQ=255)
                                                                                                                               gCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGG‑GCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCGCGGTGGTGCTGACGACCTGACGGAAATCATCCACATTGTTGAGTTCATCCAGCGTCATTAAc                     <  1:271870/149‑1 (MQ=255)
                                                                                                                                 tCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGG‑GCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCGGATTCGCGGTGGTGCTGACGACCTGACGGAAATCATCCACATTGTTGAGTTCATCCAGCGTCATTAACTg                   <  4:966922/149‑1 (MQ=255)
                                                                                                                                 tCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGG‑GCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCGCGGTGGTGCTGACGACCTGACGGAAATCATCCACATTGTTGAGTTCATCCAGCGTCATTAACTg                   >  1:1053303/1‑149 (MQ=255)
                                                                                                                                   cTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGG‑GCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCGCggt                                                                               <  3:980472/87‑1 (MQ=255)
                                                                                                                                   cTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGG‑GCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCGCgg                                                                                >  2:313197/1‑86 (MQ=255)
                                                                                                                                   cTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGG‑GCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCGCGGTGGTGCTGACGACCTGACGGAAATCATCCACATTGTTGAGTTCATc                                  >  3:818719/1‑132 (MQ=255)
                                                                                                                                   cTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGG‑GCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCGCGGTGGTGCTGACGACCTGACGGAAATCATCCACATTGTTGAGTTCATc                                  <  4:818719/132‑1 (MQ=255)
                                                                                                                                   cTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGG‑GCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCGCGGTGGTGCTGACGACCTGACGGAAATCATCCACATTGTTGAGTTCATCCAGCGTCATTAACTGGa                 >  2:392559/1‑149 (MQ=255)
                                                                                                                                    tttGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGG‑GCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCGCGGTGGTGCTGACGACCTGACGGAAATCATCCACATTGTTGAGTTCATCCAGCGTCATTAACTGGAt                <  2:1047699/149‑1 (MQ=255)
                                                                                                                                    tttGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGG‑GCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCGCGGTGGTGCTGACGACCTGACGGAAATCATCCACATTGTTGAGTTCATCCAGCGTCATTAACTGGAt                >  1:1047699/1‑149 (MQ=255)
                                                                                                                                        tcttgcGTGTAGAGTGAAACAGCGCCACATAGTGG‑GCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCGCGGTGGTGCTGACGTCCTGACGGAAATCATCCACATAGTTGAGTTCATCCAGCGTCATTAAATGGATGCCg            <  4:884396/144‑1 (MQ=255)
                                                                                                                                        tctgtcGTGTAGAGTGAATCTGCGCCACATAGTGG‑GCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCGCGGTGGTGCTGACGACCTGACGGAAATCATCCACATTGTTGAGTTCATCCAGCGTCATTAACTGGATGc              <  2:957616/147‑1 (MQ=255)
                                                                                                                                        cctaatcctgacAGTGAAATTGC‑CCACTATGTGGCGCAGATTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCGCGGTGGTGCTGACGACCTGACGGAAatcatc                                                    >  4:424979‑M1/13‑109 (MQ=255)
                                                                                                                                        cctaatcctgacAGTGAAATTGC‑CCACTATGTGGCGCAGATTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCGCGGTGGTGCTGACGACCTGACGGAAatcatc                                                    <  3:424979‑M1/97‑1 (MQ=255)
                                                                                                                                          tgtcGTGTAGAGTGAATCTGCGCCACATAGTGG‑GCAATTTCACTGTCAGGATTAGGGGTaaa                                                                                                 >  4:267975/1‑62 (MQ=255)
                                                                                                                                               tgtAGAGTGAATCTGCGCCACATAGTGG‑GCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCGCGGTGGTGCTGACGACCTGACGGAAATCATCCACATTGTTGAGTTCATCCAGCGTCATTAACTGGATGCCGATATTGc     >  3:558879/1‑149 (MQ=255)
                                                                                                                                                  agagTGAATCTGCGCCACATAGTGG‑GCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCGCGGTGGTGCTGACGACCTGACGGAAATCATCCACATTGTTGAGTTCATCCAGCGTCATTAACTGGATGCCGATATTGCCGa  <  1:402225/149‑1 (MQ=255)
                                                                                                                                                    |                                                                                                                                                   
CCAGCAGTGCATTGAAACGGGTAAACGATCAAGTTGGCGCAGCGCCTCCTCGACATCAATCCCCACCGCCGCGAAACGCTGTTTCGCTAGCTCCCAGGCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGG‑GCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCGCGGTGGTGCTGACGACCTGACGGAAATCATCCACATTGTTGAGTTCATCCAGCGTCATTAACTGGATGCCGATATTGCCGA  >  NC_000913/4095863‑4096157

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.