| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 284691 | 111 (0.700) | 6 (0.040) | 6/258 | NT | 5.2% | coding (1491/1968 nt) | yagF | CP4‑6 prophage; dehydratase family protein |
| ? | NC_000913 | = 284723 | 109 (0.710) | coding (1523/1968 nt) | yagF | CP4‑6 prophage; dehydratase family protein | |||||
CTTCCGCCAGTGCCTGCGCGAGCAGGACGGCGTAGAGCCGGATGACGTGATCCTGCCGCCGGAGAAGGCAAAAGCGAAAGGGCTGACCTCGACGGTCTGCTTCCCGACGGGCAACATCGCTCCGGAAGGTTCGGTGATCAAGGCCACGGCGATCGACCCGTCGGTGGTGGGCGAAGATGGCGTATACCACCACACCGGCCGGGTGCGGGTGTTTGTCTCGGAAGCGCAGGCGATCAAGGCGATCAAGCGGGAAGAGATTGTGCAGGGCGATATCATG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/284415‑284691‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑catgCCGGTGCCGGACGGCCCGCCGCCGATCACCACCATGATATCGCCCTGCACAATCTCTTCCCGCTTGATCGCCTTGATCGCCTGCGCTTCCGAGACAAACACCCGCACCCGGCCGGTGTGGTGGTATACGCCATCTTCGCCCACCACCGACGGGTCGATCGCCGTGGCCTTGATCACCGAACCTTCCGGAGCGATGTTGCCCGTCGGGAAGCAGACCGTCGAGGTCAGCCCTTTCGCTTTTGCCTTCTCCGGCGGCAGGATCACGTCATCCGGCT < NC_000913/284723‑284450 CTTCGGCAAGGGCCGGGGCGAGCAGGACGGCGTGGGGCCGGATGACGTGATCCTGCCGCCGGAGAAGGCAAAAGCGAAAGGGCGGACCTCGACGGTCTGCTGCCCGACGGGCAACATCGCTCCGGAAGGTTCGGTGATCAAGGCCACGGCGATCGACCCGTCGGTGGTGGGCGAAGATGGCGTATACCACCACACCGGCCGGGTGCGGGTGTTTGTCTCGGAAGCGCAGGCGATCAAGGCGATCAAGCGGGAAGAGATTGTGCAGGGCGATATCA < 4:67701/275‑1 CAAGGCGATCAAGCGGGAAGAGATTGTGCAGGGCGATATCATGCCGGTGCCGGACGGCCCGCCGCCGATCACCACCA > 5:673879/1‑77 CAAGGCGATCAAGCGGGAAGAGATTGTGCAGGGCGATATCATGCCGGTGCCGGACGGCCCGCCGCCGATCACCACCA < 6:673879/77‑1 GGCGATCAAGCGGGAAGAGATTGTGCAGGGCGATATCATGCCGGTGCCGGACGGCCCGCCGCCGATCACCACC < 7:201784/73‑1 GGCGATCAAGCGGGAAGAGATTGTGCAGGGCGATATCATGCCGGTGCCGGACGGCCCGCCGCCGATCACCACC > 8:201784/1‑73 AGCGGGAAGAGATTGTGCAGGGCGATATCATGCCGGTGCCGGACGGCCCGCCGCCGATCACC < 7:1117695/62‑1 AGCGGGAAGAGATTGTGCAGGGCGATATCATGCCGGTGCCGGACGGCCCGCCGCCGATCACC > 8:1117695/1‑62 TGCCGGTGCCGGACGGCCCGCCGCCGATCACCACCATGATATCGCCCTGCACAATCTCTTCCCGCTTGATCGCCTTGATCGCCTGCGCTTCCGAGACAAACACCCGCACCCGGCCGGTGTGGT > 7:674897/1‑123 TGCCGGTGCCGGACGGCCCGCCGCCGATCACCACCATGATATCGCCCTGCACAATCTCTTCCCGCTTGATCGCCTTGATCGCCTGCGCTTCCGAGACAAACACCCGCACCCGGCCGGTGTGGT < 8:674897/123‑1 TGCCGGTGCCGGACGGCCCGCCGCCGATCACCACCATGATATCGCCCTGCACAATCTCTTCCCGCTTGATCGCCTTGATCGCCTGCGCTTCC < 5:356883/92‑1 TGCCGGTGCCGGACGGCCCGCCGCCGATCACCACCATGATATCGCCCTGCACAATCTCTTCCCGCTTGATCGCCTTGATCGCCTGCGCTTCC > 6:356883/1‑92 TGCCGGTGCCGGACGGCCCGCCGCCGATCACCACCATGATATCGCCCTGCACAATCTCTTCCCGCTTGATCGCCTTG > 7:994180/1‑77 TGCCGGTGCCGGACGGCCCGCCGCCGATCACCACCATGATATCGCCCTGCACAATCTCTTCCCGCTTGATCGCCTTG < 8:994180/77‑1 GCCGGTGCCGGACGGCCCGCCGCCGATCACCACCATGATATCGCCCTGCACAATCTCTTCCCGCTTGATCGCCTTGATCGCCTGCGCTTCCGAGACAAACACCCGCACCCGGCCGGTGTGGTGGTATACGCCATCTTCGCCCACCACCGACGGGTCGATCGCCGTGGCCTTGATCACCGAACCTTCCGGAGCGATGTTGCCCGTCGGGAAGCAGACCGTCGAGGTCAGCCCTTTCGCTTTTGCCTTCTCCGGCGGCAGGATCACGTCATCCGGC > 2:244147/1‑274 GCCGGTGCCGGACGGCCCGCCGCCGATCACCACCATGATATCGCCCTGCACAATCTCTTCCCGCTTGATCGCCTTGATCGCCTGCGCTTCCGAGACAAACACCCGCACCCGGCCGGTGTGGTGGTATACGCCATCTTCGCCCACCACCGACGGGTCGATCGCCGTGGCCTTGATCACCGAACCTTCCGGAGCGATGTTGCCCGTCGGGAAGCAGACCGTCGAGGTCAGCCCTTTCGCTTTTGCCTTCTCCGGCGGCAGGATCACGTCATCCGGC > 2:287857/1‑274 GCCGGAGCCGGCCGGCCCGCCGCCGATCACCACCATGACATCGCCCTACACAATCGCTTCCCGCTTGATCGCCTTGATCGCCTGCGCTTCCGAGACAAACACCCGCAACCGGCCGGTGTGGTGGTATACGCCATCTTCGCCCACCACCGACGGGTCGATCGCCGTGGCCTTGATCACCGAACCTTCCGGAGCGATGTTGCCCGTCGGGAAGCAGACCGTCGAGGTCAGCCCTTTCGCTTTTGCCTTCTCCGGCGGCAGGATCACGTCATCCGGCT < 2:362427/275‑1 CTTCCGCCAGTGCCTGCGCGAGCAGGACGGCGTAGAGCCGGATGACGTGATCCTGCCGCCGGAGAAGGCAAAAGCGAAAGGGCTGACCTCGACGGTCTGCTTCCCGACGGGCAACATCGCTCCGGAAGGTTCGGTGATCAAGGCCACGGCGATCGACCCGTCGGTGGTGGGCGAAGATGGCGTATACCACCACACCGGCCGGGTGCGGGTGTTTGTCTCGGAAGCGCAGGCGATCAAGGCGATCAAGCGGGAAGAGATTGTGCAGGGCGATATCATG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/284415‑284691‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑catgCCGGTGCCGGACGGCCCGCCGCCGATCACCACCATGATATCGCCCTGCACAATCTCTTCCCGCTTGATCGCCTTGATCGCCTGCGCTTCCGAGACAAACACCCGCACCCGGCCGGTGTGGTGGTATACGCCATCTTCGCCCACCACCGACGGGTCGATCGCCGTGGCCTTGATCACCGAACCTTCCGGAGCGATGTTGCCCGTCGGGAAGCAGACCGTCGAGGTCAGCCCTTTCGCTTTTGCCTTCTCCGGCGGCAGGATCACGTCATCCGGCT < NC_000913/284723‑284450 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |