BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 284691	111 (0.700)	6 (0.040)	6/258	NT	5.2%	coding (1491/1968 nt)	yagF	CP4‑6 prophage; dehydratase family protein
*	?	NC_000913	= 284723	109 (0.710)	6 (0.040)	6/258	NT	5.2%	coding (1523/1968 nt)	yagF	CP4‑6 prophage; dehydratase family protein

Only 100 of 133 total aligned reads displayed.

AGCCGGATGACGTGATCCTGCCGCCGGAGAAGGCAAAAGCGAAAGGGCTGACCTCGACGGTCTGCTTCCCGACGGGCAACATCGCTCCGGAAGGTTCGGTGATCAAGGCCACGGCGATCGACCCGTCGGTGGTGGGCGAAGATGGCGTATACCACCACACCGGCCGGGTGCGGGTGTTTGTCTCGGAAGCGCAGGCGATCAAGGCGATCAAGCGGGAAGAGATTGTGCAGGGCGATATCATGGTGGTGATCGGCGGCGGGCCGTCCGGCACCGGCATGGAAGAGACCTACCAGCTCACCTCCGCGCTAAAGCATATCTCGTGGGGCAAGACGGTGTCGCTCATCACCGATGCGCGCTTCTCGGGCGTGTCGACGGGCGCCTGCTTCGGCCACGTGTCGCCGGAGGCGCTGGCGGGCGGGCCGATTGGCAAGCTGCGCGATAACGACATCATCGAGATTGCCGTGGATCGTCTGACGTTAACTGGCAGCGTGAACTTCATCGGCACCGCGGACAACCCGCTGACGCCGGAAGAGGGCGCGCGCGAGCTG  >  NC_000913/284450‑284997

aGCCGGATGACGTGATCCTGCCGCCGGAGAAGGCAAAAGCGAAAGGGCTGACCTCGACGGTCTGCTTCCCGACGGGCAACATCGCTCCGGAAGGTTCGGTGATCAAGGCCACGGCGATCGACCCGTCGGTGGTGGGCGAAGATGGCGTATACCACCACACCGGCCGGTTGCGGGTGTTTGTCTCGGAAGCGCAGGCGATCAAGGCGATCAAGCGGGAAGCGATTGTGTAGGGCGATGTCATGGTGGTGATCGGCGGCGGGCCGGCCGGCTCCGGc                                                                                                                                                                                                                                                                                   <  2:362427‑M2/275‑2 (MQ=255)

 gCCGGATGACGTGATCCTGCCGCCGGAGAAGGCAAAAGCGAAAGGGCTGACCTCGACGGTCTGCTTCCCGACGGGCAACATCGCTCCGGAAGGTTCGGTGATCAAGGCCACGGCGATCGACCCGTCGGTGGTGGGCGAAGATGGCGTATACCACCACACCGGCCGGGTGCGGGTGTTTGTCTCGGAAGCGCAGGCGATCAAGGCGATCAAGCGGGAAGAGATTGTGCAGGGCGATATCATGGTGGTGATCGGCGGCGGGCCGTCCGGCACCGGc                                                                                                                                                                                                                                                                                   >  2:244147‑M2/1‑273 (MQ=255)

 gCCGGATGACGTGATCCTGCCGCCGGAGAAGGCAAAAGCGAAAGGGCTGACCTCGACGGTCTGCTTCCCGACGGGCAACATCGCTCCGGAAGGTTCGGTGATCAAGGCCACGGCGATCGACCCGTCGGTGGTGGGCGAAGATGGCGTATACCACCACACCGGCCGGGTGCGGGTGTTTGTCTCGGAAGCGCAGGCGATCAAGGCGATCAAGCGGGAAGAGATTGTGCAGGGCGATATCATGGTGGTGATCGGCGGCGGGCCGTCCGGCACCGGc                                                                                                                                                                                                                                                                                   >  2:287857‑M2/1‑273 (MQ=255)

                ccggccgccGGAGAAGGCAAAAGCGAAAGGGCTGACCTCGACGGTCTGCTTCCCGACGGGCAACATCGCTCCGGAAGGTTCGGTGATCAAGGCCACGGCGATCGACCCGTCGGTGGTGGGCGAAGATGGCGTATACCACCACACCGGCCGGGTGCGGGTGTTTGTCTCGGAAGCGCAGGCGATCAAGGCGATCAAGCGGGAAGAGATTGTGCAGGGCGATATCATGGTGGTGATCGGCGGCGGGCCGTCCGGCACCGGCATGGAAGAGACCTAc                                                                                                                                                                                                                                                                    <  2:311897/271‑1 (MQ=255)

                   gccgccGGAGAAGGCAAAAGCGAAAGGGCTGACCTCGACGGTCTGCTTCCCGACGGGCAACATCGCTCCGGAAGGTTCGGTGATCAAGGCCACGGCGATCGACCCGTCGGTGGTGGGCGAAGATGGCGTATACCACCACACCGGCCGGGTGCGGGGGTTTGTCTCGGAAGCGACGGCGATCAAGGCGAACACGCGGGAAGAGATTGTGCAGGGCGCTATCATGGTGGTGCTCGGCGGCGGGCCGTCCGGCACCGGCATGGAAGAGACCTAcaccc                                                                                                                                                                                                                                                                >  4:482238/1‑271 (MQ=255)

                           ggaAGGAAAAAGGGAAAGGGCGGACTCTGGCGGTCTGCTTGCCGACGGGCAACATCGCTCCGAAAGGTTCGGTGATCAAGGCCACGGGGATCGACCCGTCGGTGGTGGGCGAAGATGGCGTATACCAACACACCGGCCGGGTGCGGGTGTTTGTCTCGGAAGCGCAGGCGATCAAGGCGATCAAGCGGGAAGAGATTGTGCAGGGCGATATCATGGTGGTGATCGGCGGCGGGCCGTCCGGCACCGGCATGGAAGAGACCTACCAGCTCACCTc                                                                                                                                                                                                                                                         <  4:224017/273‑1 (MQ=255)

                                     agggAAAGGGCTGACCTGGACGGTCGACTTCCCGACGGGCAACATCGCTCCGGAAGGTTCGGTGATCAAGGCCACGGCGAGCGACCCGTCGGTGGTGGGCGAAGATGGCGTATACCACCACACCGGCCGGGTGCGGGTGTTTGTCTCGGAAGCGCAGGCGATCAAGGCGATCAAGCGGGAAGAGATTGTGCAGGGCGATATCATGGTGGTGATCGGCGGCGGGCCGTCCGGCACCGGCATGGAAGAGACCTACCAGCTCACCTCCGCGCTAAAg                                                                                                                                                                                                                                               <  2:67918/271‑1 (MQ=255)

                                               ctgaacgggACGGTCTGCTTCCCGGCGGGCAACATCGCCTCGGAAGGTTCGGTGATCAAGGCCACGGCGATCGACCCGTCGGTGGTGGGCGAAGATGGCGTATACCACCACACCGGCCGGGTGCGGGTGTTTGTCTCGGAAGCGCCGGCGATCAAGGCGATCAAGCGGGAAGAGATTGTGCAGGGCGATATCATGGTGGTGATCGGCGGCGGGCCGTCCGGCACCGGCATGGAAGAGACCTACCAGCTCACCTCCGCGCTAAAGCATATCTCg                                                                                                                                                                                                                                      <  1:87357/265‑1 (MQ=255)

                                                                               cATCGCTCCGGAAGGTTCGGTGATGAAGGCCACGGCGATCGACCCGTCGGTGGTGGGCGAAGATGGCGTATACCACCACACCGGCCGGGTGCGGGTGTTTGTCTCGGAAGCGCAGGCGATCAAGGCGATCAAGCGGGAAGAGATTGTGCAGGGCGATATCATGGTGGTGATCGGCGGCGGGCCGTCCGGCACCGGCATGGAAGAGACCTACCAGCTCACCTCCGCGCTAAAGCATATCTCGTGGGGCAAGACGGTGTCGCTCATCACCGATgcg                                                                                                                                                                                                     <  2:356028/274‑1 (MQ=255)

                                                                                 tggttCCGGGAGGGTGGGTGAGCAAGGCCCAGGGGAGTGAGCCGTCGGGGGGGGGCGAAGATGGGGTAGACCACCAACCCGGCCGGGTGGGGGGGTTTGTCTCGGAAGCGCAGGCGATGAAGGCGATCAAGCGGGAAGAGATTGTGCAGGGCGATATCATGGTGGTGATCGGCGGCGGGCCGTCCGGCACCGGCATGGAAGAGACCTACCAGCTCACCTCCGCGCTAAAGCATATCTCGTGGGGCAAGACGGTGTCGCTCATCACCGATgcgcg                                                                                                                                                                                                   <  4:212364/270‑1 (MQ=255)

                                                                                       cgggtggggcGGTGGACAATGCCACGGAGATCGACCAGGTGGTGGTGGGCGAAGAGGGCGGATACCACCACACCGGCCGGGTGCGGGTGTTTTACGCGGAAGCTCAGGCGAGCAAGGCGATCAAGCGGGAAGAGATTGTGAAGGGCGATATCATGGCGGTGATCGCCGGCGGGCCGTCCGGCACCGGCATGGAAGAGACCTATCAGCTCACCTCCGCGCTAATGCATATTTCGTGGGGCAAGACTGTGTCGCTCATCACCGATGCGCGCTtctc                                                                                                                                                                                             <  4:41723/265‑1 (MQ=255)

                                                                                                               cGGCGATCGACCCGTCGGTGGTGGGCGAAGATGGCGTATACCACCACACCGGCCGGGTGCGGGTGTTTGTCTCGGAAGCGCAGGCGATCAAGGCGATCAAGCGGGAAGAGATTGTGCAGGGCGATATCATGGTGGTGATCGGCGGCGGGGCGTCCGGCACCGGCATGGAAGAGGCCTACCAGCTCAcc                                                                                                                                                                                                                                                           >  4:171718/1‑188 (MQ=255)

                                                                                                                            gTCGGTGGTGGGCGAAGATGGCGTATACCACCACACCGGCCGGGTGCGGGTGTTTGTCTCGGAAGCGCAGGCGATCAAGGCGATCAAGCGGGAAGAGATTGTGCAGGGCGATATCATGGTGGTGATCGGCGGCGGGCCGTCCGGCACCGGCATGGAAGAGACCTACCAGCTCACCTCCGCGCTAAAGCATATCTCGTGGGGCAAGACGGTGTCGCTCCTCACCGATGCGCGCTTCTCGGGCGTGTCGACGGGCGCCTGCTTCGGCCACGTGTCGc                                                                                                                                                       >  2:47897/1‑275 (MQ=255)

                                                                                                                                    tggGCGAAGATGGCGTATACCACCACACCGGCCGGGTGCGGGTGTTTGTCTCGGAAGCGCAGGCGATCAAGGCGATCAAGCGGGAAGAGATTGTGCAGGGCGATATCATGGTGGTGATCGGCGGCGGGCCGTCCGGCACCGGCATGGa                                                                                                                                                                                                                                                                              <  6:54670/148‑1 (MQ=255)

                                                                                                                                           aGATGGCGTATACCACCACACCGGCCGGGTGCGGGTGTTTGTCTCGGAAGCGCAGGCGATCAAGGCGATCAAGCGGGAAGAGATTGTGCAGGGCGATATCATGGTGGTGATCGGCGGCGGGCCGTCCGGCACCGGCATGGAAGAGAcc                                                                                                                                                                                                                                                                       >  8:978778/1‑148 (MQ=255)

                                                                                                                                           aGATGGCGTATACCACCACACCGGCCGGGTGCGGGTGTTTGTCTCGGAAGCGCAGGCGATCAAGGCGATCAAGCGGGAAGAGATTGTGCAGGGCGATATCATGGTGGTGATCGGCGGCGGGCCGTCCGGCACCGGCATGGAAGAGACCTACCAGCTCACCTCCGCGCTAAAGCATATCTCGTGGGGCAAGACGGTGTCGCTCATCACCGATGCGCGCTTCTCGGGCGTGTCGACGGGCGCCTGCTTCGGCCACGTGTCGCCGGAGGCGCTggcgg                                                                                                                                        >  2:543797/1‑275 (MQ=255)

                                                                                                                                            gATGGCGTATACCACCACACCGGCCGGGTGCGGGTGTTTGTCTCGGAAGCGCAGGCGATCAAGGCGATCAAGCGGGAAGAGATTGTGCAGGGCGATATCATGGTGGTGATCGGCGGCGGGCCGTCCGGCACCGGCATGGAagag                                                                                                                                                                                                                                                                          <  6:716236/144‑1 (MQ=255)

                                                                                                                                            gATGGCGTATACCACCACACCGGCCGGGTGCGGGTGTTTGTCTCGGAAGCGCAGGCGATCAAGGCGATCAAGCGGGAAGAGATTGTGCAGGGCGATATCATGGTGGTGATCGGCGGCGGGCCGTCCGGCACCGGCATGGAagag                                                                                                                                                                                                                                                                          >  5:716236/1‑144 (MQ=255)

                                                                                                                                             aTGGCGTATACCACCACACCGGCCGGGTGCGGGTGTTTGTCTCGGAAGCGCAGGCGATCAAGGCGATCAAGCGGGAAGAGATTGTGCAGGGCGATATCATGGTGGTGATCGGCGGCGGGCCGTCCGGCACCGGCATGGAAGAGACCTa                                                                                                                                                                                                                                                                     >  7:457724/1‑148 (MQ=255)

                                                                                                                                                gCGTATACCACCACACCGGCCGGGTGCGGGTGTTTGTCTCGGAAGCGCAGGCGATCAAGGCGATCAAGCGGGAAGAGATTGTGCAGGGCGATATCATGGTGGTGATCGGCGGCGGGCCGTCCGGCACCGGCATGGAAGAGACCTACCAGCTCACCTCCGCGCTAAAGCATATCTCGTGGGGCAAGACGGTGTCGCTCATCACCGATGCGCGCTTCTCGGGCGTGTCGACGGGCGCCTGCTTCGGCCACGTGTCGCCGGAGGCGCTggcgggc                                                                                                                                      >  2:205970/1‑272 (MQ=255)

                                                                                                                                                 cGTATACCACCACACCGGCCGGGTGCGGGTGTTTGTCTCGGAAGCGCAGGCGATCAAGGCGATCAAGCGGGAAGAGATTGTGCAGGGCGATATCATGGTGGTGATCGGCGGCGGGCCGTCCGGCACCGGCATGGAag                                                                                                                                                                                                                                                                            <  7:95946/137‑1 (MQ=255)

                                                                                                                                                 cGTATACCACCACACCGGCCGGGTGCGGGTGTTTGTCTCGGAAGCGCAGGCGATCAAGGCGATCAAGCGGGAAGAGATTGTGCAGGGCGATATCATGGTGGTGATCGGCGGCGGGCCGTCCGGCACCGGCATGGAag                                                                                                                                                                                                                                                                            >  8:95946/1‑137 (MQ=255)

                                                                                                                                                         accacACCGGCCGGGTGCGGGTGTTTGTCTCGGAAGCGCAGGCGATCAAGGCGATCAAGCGGGAAGAGATTGTGCAGGGCGATATCATGGTGGTGATCGGCGGCGGGCCGTCCGGCACCGGca                                                                                                                                                                                                                                                                                  >  7:674897‑M2/1‑121 (MQ=255)

                                                                                                                                                         accacACCGGCCGGGTGCGGGTGTTTGTCTCGGAAGCGCAGGCGATCAAGGCGATCAAGCGGGAAGAGATTGTGCAGGGCGATATCATGGTGGTGATCGGCGGCGGGCCGTCCGGCACCGGca                                                                                                                                                                                                                                                                                  <  8:674897‑M2/123‑3 (MQ=255)

                                                                                                                                                         accacACCGGCCGGGTGCGGGTGTTTGTCTCGGAAGCGCAGGCGATCAAGGCGATCAAGCGGGAAGAGATTGTGCAGGGCGATATCATGGTGGTGATCGGCGGCGGGCCGTCCGGCACCGGCATGGAAgaga                                                                                                                                                                                                                                                                         <  7:70586/132‑1 (MQ=255)

                                                                                                                                                         accacACCGGCCGGGTGCGGGTGTTTGTCTCGGAAGCGCAGGCGATCAAGGCGATCAAGCGGGAAGAGATTGTGCAGGGCGATATCATGGTGGTGATCGGCGGCGGGCCGTCCGGCACCGGCATGGAAgaga                                                                                                                                                                                                                                                                         >  8:70586/1‑132 (MQ=255)

                                                                                                                                                         accacACCGGCCGGGTGCGGGTGTTTGTCTCGGAAGCGCAGGCGATCAAGGCGATCAAGCGGGAAGAGATTGTGCAGGGCGATATCATGGTGGTGATCGGCGGCGGGCCGTCCGGCACCGGCATGGAAGAGACCTACCAGCTCACCTc                                                                                                                                                                                                                                                         >  5:904728/1‑148 (MQ=255)

                                                                                                                                                          ccacACCGGCCGGGTGCGGGTGTTTGTCTCGGAAGCGCAGGCGATCAAGGCGATCAAGCGGGAAGAGATTGTGCAGGGCGATATCATGGTGGTGATCGGCGGCGGGCCGTCCGGCACCGGCATGGAAGAGACCTACCAGCTCACCTcc                                                                                                                                                                                                                                                        >  7:295985/1‑148 (MQ=255)

                                                                                                                                                             cacCGGCCGGGTGCGGGTGTTTGTCTCGGAAGCGCAGGCGATCAAGGCGATCAAGCGGGAAGAGATTGTGCAGGGCGATATCATGGTGGTGATCGGCGGCGGGCCGTCCGGCACCGGCATGGAAGAGACCTACCAGCTCACCTCCGCGCTAAAGCatat                                                                                                                                                                                                                                          >  1:139552/1‑159 (MQ=255)

                                                                                                                                                                 ggccggGTGCGGGTGTTTGTCTCGGAAGCGCAGGCGATCAAGGCGATCAAGCGGGAAGAGATTGTGCAGGGCGATATCATGGTGGTGATCGGCGGCGGGCCGTCCGGCACCGGCATGGAAGAGACCTACCAGCTCACCTCCGCGCTAAAGCATATCTCg                                                                                                                                                                                                                                      <  3:139552/159‑1 (MQ=255)

                                                                                                                                                                  gccggGTGCGGGTGTTTGTCTCGGAAGCGCAGGCGATCAAGGCGATCAAGCGGGAAGAGATTGTGCAGGGCGATATCATGGTGGTGATCGGCGGCGGGCCGTCCGGCACCGGCATGGAAGAGACCTACCAGCTCACCTCCGCGCTAAAGCATATCTCGTGGGGCAAGACGGTGTCGCTCATCACCGATGCGCGCTTCTCGGGCGTGTCGACGGGCGCCTGCTTCGGCCACGTTTCGCCGGCGGCGCTGGCGGGCGGGCCGATTGGCAAGCTgcg                                                                                                                  >  2:140184/1‑274 (MQ=255)

                                                                                                                                                                  gccggGTGCGGGTGTTTGTCTCGGAAGCGCAGGCGATCAAGGCGATCAAGCGGGAAGAGATTGTGCAGGGCGATATCATGGTGGTGATCGGCGGCGGGCCGTCCGGCACCGGCATGGAAGAGACCTACCAGCTCACCTCCGCGCTAAAGCATATCCCGTGGGGCAAGACGGTGTCGCTCATCCCCGATGCGCGCTTCTCGGGCGTGTCGACGGGCGCCTGCTCCGGCCCCGCGTCCCCGGGCGCGCTGGCGGGCGCGCCCGTTGGCCAgcggcg                                                                                                                  >  4:376611/1‑274 (MQ=255)

                                                                                                                                                                           gggtagttGTGTAGGAACGGCAGGGGATGAAGGCGATCAAGGGGGAAGAGATGGTGCAGGGAGATATCATGGTGGGGATCGGCGGCGGGCCATCCGGCACCGGCATGGAAGGGACCTACCAGCTCACCTCCGCGCTAAAGCATAGCTCGTGGGGCAAGACGGTGTCGATCATCACCGATGCGCGCTTCTCGGGCGTGTCGACGGGCGCCTGCTTCGGCCACGTGTCGCCGGAGGCGCTGGCGGGCGGGCCGATTGGCAAGCTGCGCGATAACGAc                                                                                                        <  1:3687/269‑1 (MQ=255)

                                                                                                                                                                            ggtgTTTGTCTCGGAAGCGCAGGCGATCAAGGCGATCAAGCGGGAAGAGATTGTGCAGGGCGATATCATGGTGGTGATCGGCGGCGGGCCGTCCGGCACCGGCATGGAAGAGACCTACCAGCTCACCTCCGCGCTAAAGCATATCTCg                                                                                                                                                                                                                                      >  5:170747/1‑148 (MQ=255)

                                                                                                                                                                             gtgtTTGTCTCGGAAGCGCAGGCGATCAAGGCGATCAAGCGGGAAGAGATTGTGCAGGGCGATATCATGGTGGTGATCGGCGGCGGGCCGTCCGGCACCGGCATGGAAGAGACCTACCAGCTCACCTCCGCGCTAAAGCATATCTCGt                                                                                                                                                                                                                                     <  6:170747/148‑1 (MQ=255)

                                                                                                                                                                                      gggggaGCGCAGGCGATCAGAGGTAGCAAAGGGGGAGAGGTGGTGCGGGGGGAGATGAGGGTGGGGTGCGGGGGCGGGGCGGCCGGGCTCGGAATGGAAGAGAACTACCAGCTGACCTCCGGGCTAAAGCATATCTCGTGGGGCAAGACGGTGGCGCTCAGCACCGATGCGCGCTTCTCGGGCGTGTCGACGGGCGCCTGCTTCGGCCACGTGTCGCCGGAGGCGCTGGCGGGCGGGCCGATTGGCAAGCTGCGCGATAACGACATCATCgaga                                                                                              <  4:251848/269‑1 (MQ=255)

                                                                                                                                                                                       cGGAAGCGCAGGCGATCAAGGCGATCAAGCGGGAAGAGATTGTGCAGGGCGATATCATGGTGGTGATCGGCGGCGGGCCGTCCGGCACCGGCATGGAAGAGACCTACCAGc                                                                                                                                                                                                                                                                >  6:294965/1‑111 (MQ=255)

                                                                                                                                                                                       cGGAAGCGCAGGCGATCAAGGCGATCAAGCGGGAAGAGATTGTGCAGGGCGATATCATGGTGGTGATCGGCGGCGGGCCGTCCGGCACCGGCATGGAAGAGACCTACCAGc                                                                                                                                                                                                                                                                <  5:294965/111‑1 (MQ=255)

                                                                                                                                                                                       cGGAAGCGCAGGCGATCAAGGCGATCAAGCGGGAAGAGATTGTGCAGGGCGATATCATGGTGGTGATCGGCGGCGGGCCGTCCGGCACCGGCATGGAAGAGACCTACCAGCTCACCTCCGCGCTAAAGCATATCTCGTGGGGCAAGAc                                                                                                                                                                                                                           <  8:457724/148‑1 (MQ=255)

                                                                                                                                                                                        ggAAGCGCAGGCGATCAAGGCGATCAAGCGGGAAGAGATTGTGCAGGGCGATATCATGGTGGTGATCGGCGGCGGGCCGTCCGGCACCGGca                                                                                                                                                                                                                                                                                  <  5:356883‑M2/92‑3 (MQ=255)

                                                                                                                                                                                        ggAAGCGCAGGCGATCAAGGCGATCAAGCGGGAAGAGATTGTGCAGGGCGATATCATGGTGGTGATCGGCGGCGGGCCGTCCGGCACCGGca                                                                                                                                                                                                                                                                                  >  6:356883‑M2/1‑90 (MQ=255)

                                                                                                                                                                                           aGCGCAGGCGATCAAGGCGATCAAGCGGGAAGAGATTGTGCAGGGCGATATCATGGTGGTGATCGGCGGCGGGCCGTCCGGCACCGGCATGGAAGAGACCTACCAGCTCACCTCCGCGCTAAAg                                                                                                                                                                                                                                               >  8:960337/1‑124 (MQ=255)

                                                                                                                                                                                           aGCGCAGGCGATCAAGGCGATCAAGCGGGAAGAGATTGTGCAGGGCGATATCATGGTGGTGATCGGCGGCGGGCCGTCCGGCACCGGCATGGAAGAGACCTACCAGCTCACCTCCGCGCTAAAg                                                                                                                                                                                                                                               <  7:960337/124‑1 (MQ=255)

                                                                                                                                                                                           aGCGCAGGCGATCAAGGCGATCAAGCGGGAAGAGATTGTGCAGGGCGATATCATGGTGGTGATCGGCGGCGGGCCGTCCGGCACCGGCATGGAAGAGACCTACCAGCTCACCTCCGCGCTAAAGCATATCTCGTg                                                                                                                                                                                                                                    >  8:862239/1‑135 (MQ=255)

                                                                                                                                                                                           aGCGCAGGCGATCAAGGCGATCAAGCGGGAAGAGATTGTGCAGGGCGATATCATGGTGGTGATCGGCGGCGGGCCGTCCGGCACCGGCATGGAAGAGACCTACCAGCTCACCTCCGCGCTAAAGCATATCTCGTg                                                                                                                                                                                                                                    <  7:862239/135‑1 (MQ=255)

                                                                                                                                                                                           aGCGCAGGCGATCAAGGCGATCAAGCGGGAAGAGATTGTGCAGGGCGATATCATGGTGGTGATCGGCGGCGGGCCGTCCGGCACCGGCATGGAAGAGACCTACCAGCTCACCTCCGCGCTAAAGCATATCTCGTGGGGCAAGACGgtg                                                                                                                                                                                                                       <  8:295985/148‑1 (MQ=255)

                                                                                                                                                                                                aggcgatcaaggcgatcaAGCGGGAAGAGATTGTGCAGGGCGATATCATGGTGGTGATCGGCGGCGGGCCGTCCGGCACCGGCATGGAAGAGACCTACCAGCTCACCTCCGCGCTAAAGCATATCTCGt                                                                                                                                                                                                                                     >  6:765027/1‑129 (MQ=255)

                                                                                                                                                                                                 ggcgatcaaggcgatcaaGCGGGAAGAGATTGTGCAGGGCGATATCATGGTGGTGATCGGCGGCGGGCCGTCCGGCACCGGCATGGAAGAGACCTACCAGCTCACCTCCGCGCTAAAGCATATCTCGTGGGGCAAg                                                                                                                                                                                                                             >  7:544348/1‑136 (MQ=255)

                                                                                                                                                                                                 ggcgatcaaggcgatcaaGCGGGAAGAGATTGTGCAGGGCGATATCATGGTGGTGATCGGCGGCGGGCCGTCCGGCACCGGCATGGAAGAGACCTACCAGCTCACCTCCGCGCTAAAGCATATCTCGTGGGGCAAg                                                                                                                                                                                                                             <  8:544348/136‑1 (MQ=255)

                                                                                                                                                                                                 ggcgatcaaggcgatcaaGCGGGAAGAGATTGTGCAGGGCGATATCATGGTGGTGATCGGCGGCGGGCCGTCCGGCACCGGCATGGAAGAGACCTACCAGCTCACCTCCGCGCTAAAGCATATCTCGTGGGGCAAGa                                                                                                                                                                                                                            >  7:869138/1‑137 (MQ=255)

                                                                                                                                                                                                 ggcgatcaaggcgatcaaGCGGGAAGAGATTGTGCAGGGCGATATCATGGTGGTGATCGGCGGCGGGCCGTCCGGCACCGGCATGGAAGAGACCTACCAGCTCACCTCCGCGCTAAAGCATATCTCGTGGGGCAAGa                                                                                                                                                                                                                            <  8:869138/137‑1 (MQ=255)

                                                                                                                                                                                                   cgatcaaggcgatcaagCGGGAAGAGATTGTGCAGGGCGATATCATGGTGGTGATCGGCGGCGGGCCGTCCGGCACCGGCATGGAAGAGACCTACCAGCTCAc                                                                                                                                                                                                                                                            >  6:195723/1‑103 (MQ=255)

                                                                                                                                                                                                    gatcaaggcgatcaagCGGGAAGAGATTGTGCAGGGCGATATCATGGTGGTGATCGGCGGCGGGCCGTCCGGCACCGGCATGGAAGAGACCTACCAGCTCACCTCCGCGCTAAAGCATATCTCGTGGGGCAAGACGGTGTCGCTCATCACCGATGCGCGCTTCTCGGGCGTGTCGACGGGCGCCTGCTTCGGCCACGTGTCGCCGGAGGCGCTGGCGGGCGGGCCGATTGGCAAGCTGCGCGATAACGACATCATCGAGATTGCCGTGGATCGTc                                                                               <  2:482239/275‑1 (MQ=255)

                                                                                                                                                                                                     atcaaggcgatcaagCGGGAAGAGATTGTGCAGGGCGATATCATGGTGGTGATCGGCGGCGGGCCGTCCGGCACCGGCATGGAAGAGACCTACCAGCTCACCTCCGCGCTAAAGCATATCTCGTGGGGCAAGACGgt                                                                                                                                                                                                                        >  8:508292/1‑137 (MQ=255)

                                                                                                                                                                                                     atcaaggcgatcaagCGGGAAGAGATTGTGCAGGGCGATATCATGGTGGTGATCGGCGGCGGGCCGTCCGGCACCGGCATGGAAGAGACCTACCAGCTCACCTCCGCGCTAAAGCATATCTCGTGGGGCAAGACGgt                                                                                                                                                                                                                        <  7:508292/137‑1 (MQ=255)

                                                                                                                                                                                                       caaggcgatcaagCGGGAAGAGATTGTGCAGGGCGATATCATGGTGGTGATCGGCGGCGGGCCGTCCGGCACCGGca                                                                                                                                                                                                                                                                                  >  7:994180‑M2/1‑75 (MQ=255)

                                                                                                                                                                                                          ggcgatcaagCGGGAAGAGATTGTGCAGGGCGATATCATGGTGGTGATCGGCGGCGGGCCGTCCGGCACCGGCATGGAAGAGACCTACCAGCTCACCTCCGCGCTAAAGCATATCTCg                                                                                                                                                                                                                                      >  6:126949/1‑118 (MQ=255)

                                                                                                                                                                                                          ggcgatcaagCGGGAAGAGATTGTGCAGGGCGATATCATGGTGGTGATCGGCGGCGGGCCGTCCGGCACCGGCATGGAAGAGACCTACCAGCTCACCTCCGCGCTAAAGCATATCTCg                                                                                                                                                                                                                                      <  5:126949/118‑1 (MQ=255)

                                                                                                                                                                                                           gcgatcaagCGGGAAGAGATTGTGCAGGGCGATATCATGGTGGTGATCGGCGGCGGGCCGTCCGGCACCGGCATGGAagag                                                                                                                                                                                                                                                                          >  7:1059192/1‑81 (MQ=255)

                                                                                                                                                                                                           gcgatcaagCGGGAAGAGATTGTGCAGGGCGATATCATGGTGGTGATCGGCGGCGGGCCGTCCGGCACCGGCATGGAagag                                                                                                                                                                                                                                                                          <  8:1059192/81‑1 (MQ=255)

                                                                                                                                                                                                                    cGGGAAGAGATTGTGCAGGGCGATATCATGGTGGTGATCGGCGGCGGGCCGTCCGGCACCGGCATGGAAGAGACCTACCAGCTCACCTCCGCGCTAAAGCATATCTCGTGGGGCAAGACGGTGTCGCTCATCACCGATGCGCGCTTCTCGGGCGTGTCGACGGGCGCCTGCTTCGGCCACGTGTCGCCGGAGGCGCTGGCGGGCGGGCCGATTGGCAAGCTGCGCGATAACGACATCATCGAGATTGCCGTGGATCGTCTGACGTTAACTGGCAg                                                               >  2:135010/1‑275 (MQ=255)

                                                                                                                                                                                                                      ggAAGAGATTGTGCAGGGCGATATCATGGTGGTGATCGGCGGCGGGCCGTCCGGCACCGGCATGGAAGAGACCTACCAGCTCACCTCCGCGCTAAAGCata                                                                                                                                                                                                                                           <  6:104629/101‑1 (MQ=255)

                                                                                                                                                                                                                        aaGAGATTGTGCAGGGCGATATCATGGTGGTGATCGGCGGCGGGCCGTCCGGCACCGGCATGGAagag                                                                                                                                                                                                                                                                          >  8:585045/1‑68 (MQ=255)

                                                                                                                                                                                                                        aaGAGATTGTGCAGGGCGATATCATGGTGGTGATCGGCGGCGGGCCGTCCGGCACCGGCATGGAagag                                                                                                                                                                                                                                                                          <  7:585045/68‑1 (MQ=255)

                                                                                                                                                                                                                        aaGAGATTGTGCAGGGCGATATCATGGTGGTGATCGGCGGCGGGCCGTCCGGCACCGGCATGGAAGAGACCTACCAGCTCACCTCCGCGCTAAAGCATATCTCGTGGGGCAAGACgg                                                                                                                                                                                                                         <  8:426912/117‑1 (MQ=255)

                                                                                                                                                                                                                        aaGAGATTGTGCAGGGCGATATCATGGTGGTGATCGGCGGCGGGCCGTCCGGCACCGGCATGGAAGAGACCTACCAGCTCACCTCCGCGCTAAAGCATATCTCGTGGGGCAAGACgg                                                                                                                                                                                                                         >  7:426912/1‑117 (MQ=255)

                                                                                                                                                                                                                         aggtaTTGTGAAGGGCGATAGCAGGGTGGGGACCGGCGGCGGGCCGTCCGGCACCGGCAGGGAAGAGACCTACCAGCTCACCTCCGCGCTAAAGCATATCTCGTGGGGCAAGACGGTGTCGCTCATCACCGATGCGCGCTTCTCGGGCGTGTCGACGGGCGCCTGCTTCGGCCACGTGTCGCCGGAGGCGCTGGCGGGCGGGCCGATTGGCAAGCTGCGCGATAACGACATCATCGAGATTGCCGTGGATCGTCTGACGTTAACTGGCAGCGTg                                                           <  2:408425/270‑1 (MQ=255)

                                                                                                                                                                                                                          gagaTTGTGCAGGGCGATATCATGGTGGTGATCGGCGGCGGGCCGTCCGGCACCGGCATGGAAGAGACCTACCAGCTCACCTCCGCGCTAAAGCATATCTCGTGGGGCAAGACGGTGTCGCtcatc                                                                                                                                                                                                              >  5:468670/1‑126 (MQ=255)

                                                                                                                                                                                                                                 tgCAGGGCGATATCATGGTGGTGATCGGCGGCGGGCCGTCCGGCACCGGCATGGAAGAGACCTACCAGCTCACCTCCGCGCTAAAGCATATCTCGTGGGGCAAGACGGTGTCGCTCATCACCGAt                                                                                                                                                                                                        >  6:589307/1‑125 (MQ=255)

                                                                                                                                                                                                                                 tgCAGGGCGATATCATGGTGGTGATCGGCGGCGGGCCGTCCGGCACCGGCATGGAAGAGACCTACCAGCTCACCTCCGCGCTAAAGCATATCTCGTGGGGCAAGACGGTGTCGCTCATCACCGAt                                                                                                                                                                                                        <  5:589307/125‑1 (MQ=255)

                                                                                                                                                                                                                                      ggggttatCAGGGTGGGGATCGCGGGCGGGCCGCCCGGCACCGGCATGGAAGAGACCTACCAGCTCACCTCGGCGCTAAGGCATATCTCGGGGGGCAAGACGGTGTCGCTCATCACCGATGCGCGCTTCTCGGGCGTGTCGACGGGCGCCTGCTTCGGCCACGTGTCGCCGGAGGCGCTGGCGGGCGGGCCGATTGGCAAGCTGCGCGATAACGACATCATCGAGATTGCCGTGGATCGTCTGACGTTAACTGGCAGCGTGAACTTCATCGGCa                                              <  4:464105/269‑1 (MQ=255)

                                                                                                                                                                                                                                       gCGATATCATGGTGGTGATCGGCGGCGGGCCGTCCGGCACCGGCATGGAAGAGACCTACCAGCTCACCTCCGCGCTAAAGCATATCTCGTGGGGCAAGACGGTGTCGCTCATCACCGATGCGCGCTTCTCGGGCGTGTCGACggg                                                                                                                                                                              >  7:273729/1‑145 (MQ=255)

                                                                                                                                                                                                                                       gCGATATCATGGTGGTGATCGGCGGCGGGCCGTCCGGCACCGGCATGGAAGAGACCTACCAGCTCACCTCCGCGCTAAAGCATATCTCGTGGGGCAAGACGGTGTCGCTCATCACCGATGCGCGCTTCTCGGGCGTGTCGACggg                                                                                                                                                                              <  8:273729/145‑1 (MQ=255)

                                                                                                                                                                                                                                           tatCATGGTGGTGATCGGCGGCGGGCCGTCCGGCACCGGCATGGAAGAGACCTACCAGCTCACCTCCGCGCTAAAGCATATCTCGTGGGGCAAGACGGTGTCGCTCATCACCGATGCGCGCTTCTCGGGCGTGTCGACGGGCGCCTGCTTCGGCCACGTGTCGCCGGAGGCGCTGGCGGGCGGGCCGATTGGCAAGCTGCGCGATAACGACATCATCGAGATTGCCGTGGATCGTCTGACGTTAACTGGCAGCGTGAACTTCATCGGCACcgcg                                         >  2:138369/1‑274 (MQ=255)

                                                                                                                                                                                                                                                tggtggTGATCGGTGGGGGGCCGTCCGGCACCGGCATGGAAGAGACCTACCAGCTCACCTCCGCGCTAAAGCATATCTCGTGGGGCAAGACGGTGTAGCTCATCACCGATGCGCGCTTCTCGGGCGTGTCGACGGGCGCCTGCTTCGGCCACGTGTCGCCGGAGGCGCTGGCGGGCGGGCCGATTGGCAAGCTGCGCGATAACGACATCATCGAGATTGCCGTGGATCGTCTGACGTTAACTGGCAGCGTGAACTTCATCGGCACCGCGGACaa                                    <  2:376612/274‑1 (MQ=255)

                                                                                                                                                                                                                                                tggtggTGATCGGCGGCGGGCCGTCCGGCACCGGcatgatatcgccctgcacaatctcttcccgcttgatcgccttg                                                                                                                                                                                                                                         >  5:673879‑M2/1‑34 (MQ=255)

                                                                                                                                                                                                                                                tggtggTGATCGGCGGCGGGCCGTCCGGCACCGGCATGGAAGAGACCTACCAGCTCACCTCCGCGCTAAAGCATATCTCGTGGGGCAAGACGGTGTCGCTCATCACCGATGCGTGCTTCTCGGGCgtg                                                                                                                                                                                      >  5:920135/1‑128 (MQ=255)

                                                                                                                                                                                                                                                tggtggTGATCGGCGGCGGGCCGTCCGGCACCGGCATGGAAGAGACCTACCAGCTCACCTCCGCGCTAAAGCATATCTCGTGGGGCAAGACGGTGTCGCTCATCACCGATGCGCGCTTCTCGGGCgtg                                                                                                                                                                                      <  6:920135/128‑1 (MQ=255)

                                                                                                                                                                                                                                                tggtggTGATCGGCGGCGGGCCGTCCGGCACCGGCATGGAAGAGACCTACCAGCTCACCTCCGCGCTAAAGCATATCTCGTGGGGCAAGACGGTGTCGCTCATCACCGATGCGCGCTTCTCGGGCGTGTCGACGGGCGCCTGCTTCGGCCACGTGTCGCCGGAGGCGCTGGCGGGCGGGCCGATTGGCACGCTGCGCGATAACGACATCATCGAGATTGCCGTGGATCGTCTGACGTTAACTGGCAGCGTGAACTTCATCGGCACCGCGGACAAc                                   >  2:383629/1‑275 (MQ=255)

                                                                                                                                                                                                                                                tggtggTGATCGGCGGCGGGCCGTCCGGCACCGGCATGGAAGAGACCTACCAGCTCACCTCCGCGCTAAAGCATATCTCGTGGGGCAAGACGGTGTCGCTCATCACCGATGCGCGCTTCTCGGGCGTGTCGACGGGCGCCTGCTTCGGCCACGTGTCGCCGGAGGCGCTGGCGGGCGGGCCGAGTGGCAAGCTGCGAGATAACGACATCATCGAGATTGCCGTGGACCGGCTGACGTCAACTGGCAGCGTGAAATTCATCGGCACGGGGGAAAAc                                   >  1:140859/1‑275 (MQ=255)

                                                                                                                                                                                                                                                 ggtggtGATCGGCGGCGGGCCGTCCGGCACCGGcatgatatcgccctgcacaatctcttcccgcttgatcgcc                                                                                                                                                                                                                                            >  8:201784‑M2/1‑33 (MQ=255)

                                                                                                                                                                                                                                                 ggtggtGATCGGCGGCGGGCCGTCCGGCACCGGcatgatatcgccctgcacaatctcttcccgcttgatcgcc                                                                                                                                                                                                                                            <  7:201784‑M2/73‑41 (MQ=255)

                                                                                                                                                                                                                                                   tggtgATCGGCGGCGGGCCGTCCGGCACCGGCATGGAAGAGACCTACCAGc                                                                                                                                                                                                                                                                >  6:825511/1‑51 (MQ=255)

                                                                                                                                                                                                                                                   tggtgATCGGCGGCGGGCCGTCCGGCACCGGCATGGAAGAGACCTACCAGc                                                                                                                                                                                                                                                                <  5:825511/51‑1 (MQ=255)

                                                                                                                                                                                                                                                    ggtgATCGGCGGCGGGCCGTCCGGCACCGGcatgatatcgccctgcacaatctcttcccgct                                                                                                                                                                                                                                                    >  8:1117695‑M2/1‑30 (MQ=255)

                                                                                                                                                                                                                                                    ggtgATCGGCGGCGGGCCGTCCGGCACCGGcatgatatcgccctgcacaatctcttcccgct                                                                                                                                                                                                                                                    <  7:1117695‑M2/62‑33 (MQ=255)

                                                                                                                                                                                                                                                      tgATCGGCGGCGGGCCGTCCGGCACCGGCATGGAAGAGACCTACCAGCTCACCTCCGCGCTAAAGCATATCTCGTGGGGCAAGACGGTGTCGCTCATCACCGATGCGCGCt                                                                                                                                                                                                 <  8:624690/111‑1 (MQ=255)

                                                                                                                                                                                                                                                      tgATCGGCGGCGGGCCGTCCGGCACCGGCATGGAAGAGACCTACCAGCTCACCTCCGCGCTAAAGCATATCTCGTGGGGCAAGACGGTGTCGCTCATCACCGATGCGCGCt                                                                                                                                                                                                 >  7:624690/1‑111 (MQ=255)

                                                                                                                                                                                                                                                      ggagcggggggggGCCGGCCGGACCGGGAATGAAAGCGACCAACCAGCTAACCTCCGTGCTAAAGCATATCGCGGGGGGAAAGACGGTGTCGCTCATCACCGATGCGCGCTTCTCGGGCGTGTCGACGGGCGCCTGCTTCGGCCACGTGTCGCCGGAGGCGCTGGCGGGCGGGCCGATTGGCAAGCTGCGCGATAACGACATCATCGAGATTGCCGTGGATCGTCTGACGTTAACTGGCAGCGTGAACTTCATCGGCACCGCGGACAACCCGCt                              <  4:61625/270‑1 (MQ=255)

                                                                                                                                                                                                                                                      ggATCGGCGGCGGGCCGTCCGGCACCGGCATGGAAGAGACCTACCAGCTCACCTCCGCGCTAAAGCATATCTCGTGGGGCAAGACGGTGTCGCTCATCACCGATGCGCGCTTCTCGGGCGTGTCGACGGGCGCCTGCTTCGGCCACGTGTCGCCGGAGGCGCTGGCGGGCGGGCCGATTGGCAAGCTGCGCGATAACGACATCATCGAGATTGCCGTGGATCGTCTGACGTTAACTGGCAGCGTGAACTTCATCGGCACCGCGGACAACCCGCt                              <  2:25362/273‑1 (MQ=255)

                                                                                                                                                                                                                                                        aTCGGCGGCGGGCCGTCCGGCACCGGCATGGAAGAGACCTACCAGCTCACCTCCGCGCTAAAGCATATCTCGTGGGGCAAGACGGTGTCGCtca                                                                                                                                                                                                                <  7:855954/94‑1 (MQ=255)

                                                                                                                                                                                                                                                        aTCGGCGGCGGGCCGTCCGGCACCGGCATGGAAGAGACCTACCAGCTCACCTCCGCGCTAAAGCATATCTCGTGGGGCAAGACGGTGTCGCtca                                                                                                                                                                                                                >  8:855954/1‑94 (MQ=255)

                                                                                                                                                                                                                                                        aTCGGCGGCGGGCCGTCCGGCACCGGCATGGAAGAGACCTACCAGCTCACCTCCGCGCTAAAGCATATCTCGTGGGGCAAGACGGTGTCGCTCATCACCGATGCGCGCTTCTCGGGCGTGTCGACGGGCGCCTGCTTCGGCCACgtgt                                                                                                                                                          >  7:89702/1‑148 (MQ=255)

                                                                                                                                                                                                                                                          cggcggcggGCCGTCCGGCACCGGCATGGAAGAGACCTACCAGCTCACCTCCGCGCTaa                                                                                                                                                                                                                                                 <  7:418682/59‑1 (MQ=255)

                                                                                                                                                                                                                                                          cggcggcggGCCGTCCGGCACCGGCATGGAAGAGACCTACCAGCTCACCTCCGCGCTaa                                                                                                                                                                                                                                                 >  8:418682/1‑59 (MQ=255)

                                                                                                                                                                                                                                                          cggcggcggGCCGTCCGGCACCGGCATGGAAGAGACCTACCAGCTCACCTCCGCGCTAAAGCATATCTCGTGGGGCAAGACGGTGTCGCtc                                                                                                                                                                                                                 >  6:486009/1‑91 (MQ=255)

                                                                                                                                                                                                                                                           ggcggcggGCCGTCCGGCACCGGCATGGAAGAGACCTACCAGCTCACCTCCGCGCTAAAGCa                                                                                                                                                                                                                                             >  5:1002226/1‑62 (MQ=255)

                                                                                                                                                                                                                                                             cggcggGCCGTCCGGCACCGGCATGGAAGAGACCTACCAGCTCACCTCCGCGCTAAAGCATATCTCGTGGGGCAAGACGGTGTCGCTCATCACCGATGCGCGCTTCTCGGGCGTGTCGACGGGCGCCTGCTTCGGCCACGTGTCGCCGGAGGCGCTGGCGGGCGGGCCGATTGGCAAGCTGCGCGATAACGACATCATCGAGATTGCCGTGGATCGTCTGACGTTAACTGGCAGCGTGAACTTCATCGGCACCGCGGACAACCCGCTGACGCCgg                      >  2:172476/1‑275 (MQ=255)

                                                                                                                                                                                                                                                             cggcggGCCGTCCGGCACCGGCATGGAAGAGACCTACCAGCTCACCTCCGCGCTAAAGCATATCTCGTGGGGCAAGACGGTGTCGCTCATCACCGATGCGCGCTTCTCGGGCGTGTCGACGGGCGCCTGCTTCGGCCACGTGTCGCCGGAGGCGCTGGCGGGCGGGCCGATTGGCAAGCTGCGCGATAACGACATCATCGAGATTGCCGTGGATCGTCTGACGTTAACTGGCAGCGTGAACTTCATCGGCACCGCGGACAACCCGCTGACGCCg                       >  2:187616/1‑274 (MQ=255)

                                                                                                                                                                                                                                                                              ccggcaTGGAAGAGACCTACCAGCTCACCTCCGCGCTaa                                                                                                                                                                                                                                                 <  5:171539/39‑1 (MQ=255)

AGCCGGATGACGTGATCCTGCCGCCGGAGAAGGCAAAAGCGAAAGGGCTGACCTCGACGGTCTGCTTCCCGACGGGCAACATCGCTCCGGAAGGTTCGGTGATCAAGGCCACGGCGATCGACCCGTCGGTGGTGGGCGAAGATGGCGTATACCACCACACCGGCCGGGTGCGGGTGTTTGTCTCGGAAGCGCAGGCGATCAAGGCGATCAAGCGGGAAGAGATTGTGCAGGGCGATATCATGGTGGTGATCGGCGGCGGGCCGTCCGGCACCGGCATGGAAGAGACCTACCAGCTCACCTCCGCGCTAAAGCATATCTCGTGGGGCAAGACGGTGTCGCTCATCACCGATGCGCGCTTCTCGGGCGTGTCGACGGGCGCCTGCTTCGGCCACGTGTCGCCGGAGGCGCTGGCGGGCGGGCCGATTGGCAAGCTGCGCGATAACGACATCATCGAGATTGCCGTGGATCGTCTGACGTTAACTGGCAGCGTGAACTTCATCGGCACCGCGGACAACCCGCTGACGCCGGAAGAGGGCGCGCGCGAGCTG  >  NC_000913/284450‑284997

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 9 ≤` `ATCG/ATCG` `< 19 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.