| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 3226765 = | 142 (0.900) | 8 (0.050) | 6/256 | NT | 5.7% | coding (532/1434 nt) | ygjI | putative transporter |
| ? | NC_000913 | 3226786 = | 127 (0.840) | coding (553/1434 nt) | ygjI | putative transporter | |||||
GAATACCTGCACCGATCCGCCGGTAAATTTCAACTCTTTGCTGCTGACGAAGACGTTAATCAGCACCGAGGAGACGGAATACAGTACGCCGATAAAAATCCCGGCGAGGATGATCACTTTAACGAACGATTTCGAACCGCCTTTGACGTCGTTAACGTACACAGCGACGGACTCCGCGCCACCTGCGGCCATAAAGATCCAGGTGGTAACGCCGAGGAACGCCCAGTTGAAGTTCGGGATCATCGCGTCAACGGTGATGGCGTCAGCAGGCTGTACGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/3227043‑3226765‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acgccATCACCGTTGACGCGATGATCCCGAACTTCAACTGGGCGTTCCTCGGCGTTACCACCTGGATCTTTATGGCCGCAGGTGGCGCGGAGTCCGTCGCTGTGTACGTTAACGACGTCAAAGGCGGTTCGAAATCGTTCGTTAAAGTGATCATCCTCGCCGGGATTTTTATCGGCGTACTGTATTCCGTCTCCTCGGTGCTGATTAACGTCTTCGTCAGCAGCAAAGAGTTGAAATTTACCGGCGGATCGGTGCAGGTATTCCACGGCATGGCGGC > NC_000913/3226786‑3227057 GAATACCTGCACCGATCCGCCGGTAAATTTCAACTCTTTGCTGCTGACGAAGACGTTAATCAGCACCGAGGAGACGGAATACAGTACGCCGATAAAAATCCCGGCGAGGATGATCACTTTAACGAACGATTTCGAACCGCCTTTGACGTCGTTAACGTACACAGCGACGGACTCCGCGCCACCTGCGGCCATAAAGATCCAGGTGGTAACGCCGAGGAACGCCCAGTTGAAGTTCGGGATCATCGCGTCAACGGTGATGGCGTCAGCAGGCTGTA < 2:244780/275‑1GAATACCTGCACCGATCCGCCGGTAAATTTCAACTCTTTGCTGCTGACGAAGACGTTAATCAGCACCGAGGAGACGGAATACAGTACGCCGATAAAAATCCCGGCGAGGATGATCACTTTAACGAACGATTTCGAACCGCCTTTGACGTCGTTAACGTACACAGCGACGGACTCCGCGCCACCTGCGGCCATAAAGATCCAGGTGGTAACGCCGAGGAACGCCCAGTTGAAGTTCGGGATCATCGCGTCAACGGTGATGGCGTCAGCAGGCTGTA < 2:335881/275‑1 CCTGCACCGATCCGCCGGTAAATTTCAACTCTTTGCTGCTGACGAAGACGTTAATCAGCACCGAGGAGACGGAATACAGTACGCCGATAAAAATCCCGGCGAGGATGATCACTTTAACGAACGATTTCGAACCGCCTTTGACGTCGTTAACGTACACAGCGACGGACTCCGCGCCACCTGCGGCCATAAAGATCCAGGTGGTAACGCCGAGGAACGCCCAGTTGAAGTTCGGGATCATCGCGTCAACGGTGATGGCGTCAGCAGGCTGTACGCC > 4:72707/1‑274 TTCGAACCGCCTTTGACGTCGTTAACGTACACAGCGACGGACTCCGCGCCACCTGCGGCCATAAAGATCCAGGTGGTAACGCCGAGGAACGCCCAGTTGAAGTTCGGGATCATCGCGTCAACGGTGATGGCGTCAGCAGGCTGTACGC > 6:339441/1‑148 TGGCGTCAGCAGGCTGTACGCCATCACCGTTGACGCGATGATCCCGAACTTCAACTGGGCGTTCCTCGGCGTTACCA > 8:184008/1‑77 TGGCGTCAGCAGGCTGTACGCCATCACCGTTGACGCGATGATCCCGAACTTCAACTGGGCGTTCCTCGGCGTTACCA < 7:184008/77‑1 GCGTCAGCAGGCTGTACGCCATCACCGTTGACGCGATGATCCCGAACTTCAACTGGGCGTTCCTCGGCGTTACCACCTGGATCTTTATGGCCGCAGGTGGCGCGGAGTCCGTCGCTGTGTACGTTAACGACGTCAAAGGCGGTTCGAA > 8:796756/1‑148 GCGTCAGCAGGCTGTACGCCATCACCGTTGACGCGATGATCCCGAACTTCAACTGGGCGTTCCTCGGCGTTACCACCTGGATCTTTATGGCCGCAGGTGGCGCGGAGTCCGTCGCTGTGTACGT > 6:189488/1‑124 GCGTCAGCAGGCTGTACGCCATCACCGTTGACGCGATGATCCCGAACTTCAACTGGGCGTTCCTCGGCGTTACCACCTGGATCTTTATGGCCGCAGGTGGCGCGGAGTCCGTCGCTGTGTACGT < 5:189488/124‑1 GCGTCAGCAGGCTGTACGCCATCACCGTTGACGCGATGATCCCGAACTTCAACTGGGCGTTCCTCGGCG > 7:1051824/1‑69 GCGTCAGCAGGCTGTACGCCATCACCGTTGACGCGATGATCCCGAACTTCAACTGGGCGTTCCTCGGCG < 8:1051824/69‑1 GCAGGCTGTACGCCATCACCGTTGACGCGATGATCCCGAACTTCAACTGGGCGTTCCTCGGCGTTACCACCTGGATCTTTATGGCCGCAGGTGGCGCGGAGTCCGTCGCTGTGTACGTTAACGACGTCAAAGGCGGTTCGAAATCGTT < 7:796756/148‑1 CGCCATCACCGTTGACGCGATGATCCCGAACTTCAACTGGGCGTTCCTCGGCGTTACCACCTGGATCTTTATGGCCGCAGGTGGCGCGGAGTCCGTCGCTGTGTACGTTAACGACGTCAAAGGCGGTTCGAAATCGTTCGTTAAAGTGATCATCCTCGCCGGGATTTTTATCGGCGTACTGTATTCCGTCTCCTCGGTGCTGATTAACGTCTTCGTCAGCAGCAAAGAGTTGAAATTTACCGGCGGATCGGTGCAGGTATTCCACGGCATGGCG < 2:12320/274‑1 CGCCATCACCGTTGACGCGATGATCCCGAACTTCAACTGGGCGTTCCTCGGCGTTACCACCTGGATCTTTATGGCCGCAGGTGGCGCGGAGTCCGTCGCTGTGTACGTTAACGACGTCAAAGGCGGTTCGAAATCGTTCGTTAAAGTG < 7:685072/148‑1 GCCATACCCCTTGACCCGATGTCCCCCAACTTCAACTGGGCGTTCCTCGGCGTTACCACCTGGATCTTTATGGCCGCAGGTGGCGCGGAGTCCGTCGCTGTGTACGTTAACGACGTCAAAGGCGGTTCGAAATCGTTCGTTAAAGTGATCATCCTCGCCGGGATTTTTATCGGCGTACTGTATTCCGTCTCCTCGGTGCTGATTAACGTCTTCGTCAGCAGCAAAGAGTTGAAATTTACCGGCGGATCGGTGCAGGTATTCCACGGCATGGCGGC < 4:284586/275‑1 CCATCACCGTTGACGCGATGATCCCGAACTTCAACTGGGCGTTCCTCGGCGTTACCACCTGGATCTTTATGGCCGCAGGTGGCGC < 7:652376/85‑1 CCATCACCGTTGACGCGATGATCCCGAACTTCAACTGGGCGTTCCTCGGCGTTACCACCTGGATCTTTATGGCCGCAGGTGGCGC > 8:652376/1‑85 GAATACCTGCACCGATCCGCCGGTAAATTTCAACTCTTTGCTGCTGACGAAGACGTTAATCAGCACCGAGGAGACGGAATACAGTACGCCGATAAAAATCCCGGCGAGGATGATCACTTTAACGAACGATTTCGAACCGCCTTTGACGTCGTTAACGTACACAGCGACGGACTCCGCGCCACCTGCGGCCATAAAGATCCAGGTGGTAACGCCGAGGAACGCCCAGTTGAAGTTCGGGATCATCGCGTCAACGGTGATGGCGTCAGCAGGCTGTACGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/3227043‑3226765‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acgccATCACCGTTGACGCGATGATCCCGAACTTCAACTGGGCGTTCCTCGGCGTTACCACCTGGATCTTTATGGCCGCAGGTGGCGCGGAGTCCGTCGCTGTGTACGTTAACGACGTCAAAGGCGGTTCGAAATCGTTCGTTAAAGTGATCATCCTCGCCGGGATTTTTATCGGCGTACTGTATTCCGTCTCCTCGGTGCTGATTAACGTCTTCGTCAGCAGCAAAGAGTTGAAATTTACCGGCGGATCGGTGCAGGTATTCCACGGCATGGCGGC > NC_000913/3226786‑3227057 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |