BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 1682065	113 (0.720)	8 (0.050)	6/252	NT	6.8%	intergenic (‑35/‑94)	ydgC/rstA	GlpM family inner membrane protein/response regulator of RstAB two‑component system
*	?	NC_000913	= 1682073	113 (0.760)	8 (0.050)	6/252	NT	6.8%	intergenic (‑43/‑86)	ydgC/rstA	GlpM family inner membrane protein/response regulator of RstAB two‑component system

Only 100 of 153 total aligned reads displayed.

CGACACCAGGTAAACAAAATAGGGAATAATCGACCACATACTAAAAATGATGGTTGCGCGTAAGGCTTCAATGCCGCGTTCGCTGGCAACAATATAATGCGCGATAAGCGCAAAGGTCGGGAAAAGTGGAATCAGCCCGGCGATATAATAATTTTTCGTTTTTGCTAAAACACCAATCAACAGCACTACCAGCGCACCGAGCGCGGCTTTGATTACCAGCCCCATCTTTTTACCTTAACACTTCCATAACAAGTCATCAGTAGAATACCTGATGAAAACTTGTTTAGAAACGATTGATAGTAAGTAAAAACAGCGCGGTGTATTGTGACGTTTTTATATCTACCGTGAATGTTATGAACACTATCGTATTTGTGGAAGATGATGCGGAAGTCGGTTCACTGATTGCCGCGTACCTGGCAAAACATGATATGCAGGTTACCGTAGAGCCGCGCGGCGACCAGGCCGAAGAAACCATTTTGCGAGAAAATCCGGATTTGGTGTTACTCGACATCATGCTACCAGGCAAGGA  >  NC_000913/1681806‑1682334

cGACACCAGGTAAACAAAATAGGGAATAATCGACCACATACTAAAAATGATGGTTGCGCGTAAGGCTTCAATGCCGCGTTCGCTGGCAACAATATAATGCGCGATAAGCGCAAAGGTCGGGAAAAGTGGAATCAGCCCGGCGATATAATAATTTTTCGTTTTTGCTAAAACACCAATCAACAGCACTACCAGCGCACCGAGCGCGGCTTTGATTACCAGCCACATCTTTTGACCTTAAACCTTCCCAAACAAGTCATAATTAAACTACctgatga                                                                                                                                                                                                                                                                <  4:506688‑M2/275‑8 (MQ=255)

             aCAAAATAGGGAATAATCGACCACATACTAAAAATGATGGTTGCGCGTAAGGCTTCAATGCCGCGTTCGCTGGCAACAATATAATGCGCGATAAGCGCAAAGGTCGGGAAAAGTGGAATCAGCCCGGCGATATAATAATTTTTCGTTTTTGCTAAAACACCAATCAACAGCACTACCAGCGCACCGAGCGCGGCTTTGATTACCAGCCCCATCTTTTTACCTTAACACTTCCATAACAAGTCATCAGTAGAATACCTGATGAAAACTTGTTTAGa                                                                                                                                                                                                                                                   >  4:95528/1‑275 (MQ=255)

              aaaaaaaGGGAATAATCCACCACATACTAAAAATGATGGTTGCGCGTAAGGCTTCAATGCCGCGTTCGCTGGCAACAATATAATGCGCGATAAGCGCAAAGGTCGGGAAAAGTGGAATCAGCCCGGCGATATAATAATTTTTCGTTTTTGCTAAAACACCAATCAACAGCACTACCAGCGCACCGAGCGCGGCTTTGATTACCAGCCCCATCTTTTTACCTTAACACTTCCATAACAAGTCATCAGTAGAATACCTGATGAAAACTTGTTTAGaa                                                                                                                                                                                                                                                  <  4:109174/274‑1 (MQ=255)

                           aatCGACCACATACTAAAAATGATGGTTGCGCGTAAGGCTTCAATGCCGCGTTCGCTGGCAACAATATAATGCGCGATAAGCGCAAAGGTCGGGAAAAGTGGAATCAGCCCGGCGATATAATAATTTTTCGTTTTTGCTAAAACACCAATCAACAGCACTACCAGCGCACCGAGCGCGGCTTTGATTACCAGCCCCATCTTTTTACATTAACACTTCCATAACAAGTCATCAGTAGAATACATGATGAAAACTTGTTTAGAAACGATTGAAagta                                                                                                                                                                                                                                     >  2:541786/1‑275 (MQ=255)

                                       acaaaaatTGAGGGTTGCGCGTAAGGCTTAAATGCCCGGTGTGCTGTAAACAAAAAAATGAGCGATAAGCGAAAAGGTCGGGAAAAGTGGAATCAGCCCGGCGATATAATAATTTTTCGTTTTTGCTAAAACACCAATCAACAGCACTACCAGCGCACCTAGCGCGGCTTTGATTACCAGCCCCATCTTTTTACCTTAACACTTCCATAACAAGTCATCAGTAGAATACCTGATGAAAACTTGTTTAGAAACGATTGATAGTAAGTAAAAACAgc                                                                                                                                                                                                                         <  4:536621/272‑1 (MQ=255)

                                                                                   tGGCAACAATATAATGCGCGATAAGCGCAAAGGTCGGGAAAAGTGGAATCAGCCCGGCGATATAATAATTTTTCGTTTTTGCTAAAACACCAATCAACAGCACTACCAGCGCACCGAGCGCGGCTTTGATTACCAGCCCCATCTTTTTACCTTAACACTTCCATAACAAGTCATCAGTAGAATACCTGATGAAAACTTGTTTAGAAACGATTGATAGTAAGTAAAAACAGCGCGGTGTATTGTGACGTTTTTATATCTACCGTGAATGTTATGaa                                                                                                                                                                             <  2:425256/275‑1 (MQ=255)

                                                                                   tGGCAACAATATAATGAGCGATAAGCGCAAAGGTCGGGAAAAGTGGAATCAGCCCGGCGATATAATAATTTTTCGTTTTTGCTAAAACACCAATCAACAGCACTACCAGCGCACCGAGCGCGGCTTTGATTACCAGCCCCATCTTTTTACCTTAACACTTCCATAACAAGTCATCAGTAGAATACCTGATGAAAACTTGTTTAGAAACGATTGATAGTAAGTAAAAACAGCGCGGTGTATTGTGACGTTTTTATATCTACCGTGAATGTTATGaa                                                                                                                                                                             <  2:269338/275‑1 (MQ=255)

                                                                                    ggaaacaaTATAATGCGCGAGAAGCGCAAAGGGCGGGAAAAGTGGAATCAGCCCGGCGATATAATAATTTTTCGTTTTTGCTAAAACACCAATCAACAGCACTACCAGCGCACCGAGCGCGGCTTTGATTACCAGCCCCATCTTTTTACCTTAACACTTCCATAACAAGTCATCAGTAGAATACCTGATGAAAACTTGTTTAGAAACGATTGATAGTAAGTAAAAACAGCGCGGTGTATTGTGACGTTTTTATATCTACCGTGAATGTTATGAac                                                                                                                                                                            <  1:155266/272‑1 (MQ=255)

                                                                                       aacaaTATAATTGGCGATAAGCGCAAAGGGCGGGAAAAGTGTAATCAGCCCGGCGATATAATAATTTTTCGTTTTTGCTAAAACACCAATCAACAGCACTACCAGCGCACCGAGCGCGGCTTTGATTACCAGCCCCATCTTTTTACCTTAACACTTCCATAACAAGTCATCAGTAGAATACCTGATGAAAACTTGTTTAGAAACGATTGATAGTAAGTAAAAACAGCGCGGTGTATTGTGACGTTTTTATATCTACCGTGAATGTTATGAacac                                                                                                                                                                          <  2:506689/274‑1 (MQ=255)

                                                                                                 tGCGCGATAAGCGCAAAGGTCGGGAAAAGTGGAATCAGCCCGGCGATATAATAATTTTTCGTTTTTGCTAAAACACCAATCAACAGCACTACCAGCGCACCGAGCGCGGCTTTGATTACCAGCCCCATCTTTTTACCTTAACACTTCCATAACAAGTCATCAGTAGAATACCGGATGAAAACTTGTTTAGAAACGATTGATAGTAAGTAAAAACAGGGCGGTGTATTGTGCCGTTTTTATATATACCGTGAATGTTATGAACACTATCGTATTtg                                                                                                                                                               >  2:238316/1‑275 (MQ=255)

                                                                                                                         naaaGTGGAATCATCCCGGCCATATCATAATTTTTCGTTTTTGCTAAAACACCANTCAANAGCACTACCAGCGCACCGAGCGCNGCTTTGATTACCAGCCCCATCTTTTTACCTTAACACTTCCATAACAAGTCATCAGTAGAATACCTGATGAAAACTTGTTTAGAAACGATTGATAGTAAGTAAAAACAGCGCGGTGTATTGTGa                                                                                                                                                                                                           <  4:541785/206‑1 (MQ=255)

                                                                                                                               ggAATCAGCCCGGCGATATAATAATTTTTCGTTTTTGCTAAAACACCAATCAACAGCACTACCAGCGCACCGAGCGCGGCTTTGATTACCAGCCCCATCTTTTTACCTTAACACTTCCATAACAAGTCATCAGgtattctactgatga                                                                                                                                                                                                                                                                >  8:233030‑M1/1‑133 (MQ=255)

                                                                                                                               ggAATCAGCCCAGCGATATAATAATTTTTCCTTTTTGCTAAAACCCCAATCAACAGCCCTACCAACGACCCGAGCGCTGCTTTGATTACCAGCCCCATCTTTTTACCTTAACACTTCCATAACAAGTCATCAGTAGAATACCTGATGAAAACTTTTTTAGAAACGATTGATAGTAAGTAAAAACAGCGCGGTGTATTGTGACGTTTTTATATCTACCGTGAATGTTATGAACACTATCGTATTTGTGGAAGATGATGCGGAAGTCGGTTCACTGa                                                                                                                                 <  4:238315/275‑1 (MQ=255)

                                                                                                                                 aaTCAGCCCGGCGATATAATAATTTTTCGTTTTTGCTAAAACACCAATCAACAGCACTACCAGCGCACCGAGCGCGGCTTTGATTACCAGCCCCATCTTTTTACCTTAACACTTCCATAACAAGTCATCAGTAGAATACCTGATGaaa                                                                                                                                                                                                                                                              <  8:842038/148‑1 (MQ=255)

                                                                                                                                    cAGCCCGGCGATATAATAATTTTTCGTTTTTGCTAAAACACCAATCAACAGCACTACCAGCGCACCGAGCGCGGCTTTGATTACCAGCCCCATCTTTTTACCTTAACACTTCCATAACAAGTCATCAGTAGAAt                                                                                                                                                                                                                                                                         >  6:856070/1‑134 (MQ=255)

                                                                                                                                                    taatTTTTCGTTTTTGCTAAAACACCAATCAACAGCACTACCAGCGCACCGAGCGCGGCTTTGATTACCAGCCCCATCTTTTTACCTTAACACTTCCATAACAAGTCATCAGTAGAATACCTGATGAAAACTTGTTTAGaa                                                                                                                                                                                                                                                  >  7:807285/1‑141 (MQ=255)

                                                                                                                                                               ttttGCTAAAACACCAATCAACAGCACTACCAGCGCACCGAGCGCGGCTTTGATTACCAGCCCCATCTTTTTACCTTAACACTTCCATAACAAGTCATCAGTAGAATACCTGATGaaaa                                                                                                                                                                                                                                                             <  7:911617/119‑1 (MQ=255)

                                                                                                                                                               ttttGCTAAAACACCAATCAACAGCACTACCAGCGCACCGAGCGCGGCTTTGATTACCAGCCCCATCTTTTTACCTTAACACTTCCATAACAAGTCATCAGTAGAATACCTGATGaaaa                                                                                                                                                                                                                                                             >  8:911617/1‑119 (MQ=255)

                                                                                                                                                               ttttGCTAAAACACCAATCAACAGCACTACCAGCGCACCGAGCGCGGCTTTGATTACCAGCCCCATCTTTTTACCTTAACACTTCCATAACAAGTCATCAGTAGAATACCTGATGAAAACt                                                                                                                                                                                                                                                           <  7:633985/121‑1 (MQ=255)

                                                                                                                                                               ttttGCTAAAACACCAATCAACAGCACTACCAGCGCACCGAGCGCGGCTTTGATTACCAGCCCCATCTTTTTACCTTAACACTTCCATAACAAGTCATCAGTAGAATACCTGATGAAAACTTGTTTAGAAACg                                                                                                                                                                                                                                               <  8:1006732/133‑1 (MQ=255)

                                                                                                                                                               ttttGCTAAAACACCAATCAACAGCACTACCAGCGCACCGAGCGCGGCTTTGATTACCAGCCCCATCTTTTTACCTTAACACTTCCATAACAAGTCATCAGTAGAATACCTGATGAAAACTTGTTTAGAAACg                                                                                                                                                                                                                                               >  7:1006732/1‑133 (MQ=255)

                                                                                                                                                                   gCTAAAACACCAATCAACAGCACTACCAGCGCACCGTGCGCGGCTTTGATTACCAGCCCCATCTTTTTACCTTAACACTTCCATAACAAGTCATCAGTAGAATACCTGATGAAAACTTGTTTAGAAACGATTGATAGTAAGTAAAAACAGCGCGGTGTATTGTGACGTTTTTATATCTACCGTGAATGTTATGAACACTATCGTATTTGTGGAAGATGATGCGGAAGTCGGTTCACTGATTGCCGCGTACCTGGCAAAACATGATATGCAGGTTa                                                                                             <  2:400499/275‑1 (MQ=255)

                                                                                                                                                                     tAAAACACCAATCAACAGCACTACCAGCGCACCGAGCGCGGCTTTGATTACCAGCCCCATCTTTTTACCTTAACACTTCCATAACAAGTCATCAGTAGAATACCTGATGAAAACTTGTTTAGAAACGATTGATAGTAAGTAAAAACAg                                                                                                                                                                                                                          <  5:873922/148‑1 (MQ=255)

                                                                                                                                                                      aaaaCACCAATCAACAGCACTACCAGCGCACCGAGCGCGGCTTTGATTACCAGCCCCATCTTTTTACCTTAACACTTCCATAACAAGTCATCAGTAGAATACCTGATGAAAACTTGTTTAGAAACGATTg                                                                                                                                                                                                                                           >  5:33995/1‑130 (MQ=255)

                                                                                                                                                                          cacCAATCAACAGCACTACCAGCGCACCGAGCGCGGCTTTGATTACCAGCCCCATCTTTTTACCTTAACACTTCCATAACAAGTCATCAGTAGAATACc                                                                                                                                                                                                                                                                      >  8:363921‑M2/1‑98 (MQ=255)

                                                                                                                                                                               aTCAACAGCACTACCAGCGCACCGAGCGCGGCTTTGATTACCAGCCCCATCTTTTTACCTTAACACTTCCATAACAAGTCATCAGTAGAATACCTGATGAAAACTTGt                                                                                                                                                                                                                                                        >  8:737771/1‑108 (MQ=255)

                                                                                                                                                                               aTCAACAGCACTACCAGCGCACCGAGCGCGGCTTTGATTACCAGCCCCATCTTTTTACCTTAACACTTCCATAACAAGTCATCAGTAGAATACCTGATGAAAACTTGTTTAGaaa                                                                                                                                                                                                                                                 >  6:733132/1‑115 (MQ=255)

                                                                                                                                                                               aTCAACAGCACTACCAGCGCACCGAGCGCGGCTTTGATTACCAGCCCCATCTTTTTACCTTAACACTTCCATAACAAGTCATCAGTAGAATACCTGATGAAAACTTGTTTAGaaa                                                                                                                                                                                                                                                 <  5:733132/115‑1 (MQ=255)

                                                                                                                                                                                tCAACAGCACTACCAGCGCACCGAGCGCGGCTTTGATTACCAGCCCCATCTTTTTACCTTAACACTTCCATAACAAGTCATCAGTAGAATACCTGATGAAAACTTGTTTAGAAACGATTGATagta                                                                                                                                                                                                                                     <  6:404997/126‑1 (MQ=255)

                                                                                                                                                                                   aCAGCACTACCAGCGCACCGAGCGCGGCTTTGCTTACAAGCCCCATCTTTTTACCTTAACACTTCCATAACAAGTCATCAGTAGAATACCTGATGAAAACTTGTTTAGAAACGATTGATAGTAAGTAAAAACAGCGCGTTGTATTGTGACGTTTTTATATCTACCGTGAATGTTATGAACACTATCGTATTTGTGGAAGATGATGCGGAAGTCGGTTCACTGATTGCCGCGTACCTGGCAAAACATGATATGCAGGTTACCGTAGAGCcgcgcg                                                                              <  4:86525/274‑1 (MQ=255)

                                                                                                                                                                                   aCAGCACTACCAGCGCACCGAGCGCGGCTTTGATTACCAGCCCCATCTTTTTACCTTAACACTTCCATAACAAGTCATCAGTAGAATACCTGATGAAAACTTGTTTAGAAACGATTGATAGTAAGTaaaa                                                                                                                                                                                                                              <  8:792330/130‑1 (MQ=255)

                                                                                                                                                                                   aCAGCACTACCAGCGCACCGAGCGCGGCTTTGATTACCAGCCCCATCTTTTTACCTTAACACTTCCATAACAAGTCATCAGTAGAATACCTGATGAAAACTTGTTTAGAAACGATTGATAGTAAGTaaaa                                                                                                                                                                                                                              >  7:792330/1‑130 (MQ=255)

                                                                                                                                                                                   aCAGCACTACCAGCGCACCGAGCGCGGCTTTGATTACCAGCCCCATCTTTTTACCTTAACACTTCCATAACAAGTCATCAGTAGAATACCTGATGAAAACTTGTTTAGAAACGATTGATAGTAAGTAAAAACAGCGCGGTGTAt                                                                                                                                                                                                                <  8:266294/144‑1 (MQ=255)

                                                                                                                                                                                         cTACCAGCGCACCGAGCGCGGCTTTGATTACCAGCCCCATCTTTTTACCTTAACACTTCCATAACAAGTCATCAGTAGAATACCTGATGAAAACTTGATTAGAAACGATTGATAGTAAGTAAAAACAGCGCGGTGTATTGTGACGttt                                                                                                                                                                                                      >  7:344890/1‑148 (MQ=255)

                                                                                                                                                                                           aCCAGCGCACCGAGCGCGGCTTTGATTACCAGCCCCATCTTTTTACCTTAACACTTCCATAACAAGTCATCAGgtattctactgatgacttg                                                                                                                                                                                                                                                            <  6:589168‑M1/92‑20 (MQ=255)

                                                                                                                                                                                           aCCAGCGCACCGAGCGCGGCTTTGATTACCAGCCCCATCTTTTTACCTTAACACTTCCATAACAAGTCATCAGgtattctactgatgacttg                                                                                                                                                                                                                                                            >  5:589168‑M1/1‑73 (MQ=255)

                                                                                                                                                                                           aCCAGCGCACCGAGCGCGGCTTTGATTACCAGCCCCATCTTTTTACCTTAACACTTCCATAACAAGTCATCAGTAGa                                                                                                                                                                                                                                                                           >  6:1004726/1‑77 (MQ=255)

                                                                                                                                                                                                cgcACCGAGCGCGGCTTTGATTACCAGCCCCATCTTTTTACCTTAACACTTCCATAACAAGTCATCAGTAGAATACCTGATGAAAACTTGTTTAGAAACGa                                                                                                                                                                                                                                              <  7:1080781/101‑1 (MQ=255)

                                                                                                                                                                                                cgcACCGAGCGCGGCTTTGATTACCAGCCCCATCTGTTTACCTTAACACTTCCATAACAAGTCATCAGTAGAATACCTGATGAAAACTTGTTTAGAAACGa                                                                                                                                                                                                                                              >  8:1080781/1‑101 (MQ=255)

                                                                                                                                                                                                  cACCGAGCGCGGCTTTGATTACCAGCCCCATCTTTTTACCTTAACACTTCCATAACAAGTCATCAGTAGAATACCTGATGAAAACTTGTTTAGAAACGATTGATagtaagt                                                                                                                                                                                                                                  >  7:891313/1‑111 (MQ=255)

                                                                                                                                                                                                    ccGAGCGCGGCTTTGATTACCAGCCCCATCTTTTTACCTTAACACTTCCATAACAAGTCATCAGTAGAATACCTGATGAAAACTTGTTTAGAAACGATTGAt                                                                                                                                                                                                                                         <  7:312585/102‑1 (MQ=255)

                                                                                                                                                                                                    ccGAGCGCGGCTTTGATTACCAGCCCCATCTTTTTACCTTAACACTTCCATAACAAGTCATCAGTAGAATACCTGATGAAAACTTGTTTAGAAACGATTGAt                                                                                                                                                                                                                                         >  8:312585/1‑102 (MQ=255)

                                                                                                                                                                                                    ccGAGCGCGGCTTTGATTACCAGCCCCATCTTTTTACCTTAACACTTCCATAACAAGTCATCAGTAGAATACCTGATGAAAACTTGTTTAGAAACGATTGATAGTAAGTAAAAACAGCGCGGTGTATTGTGACGTTTTTATATCTACCGTGAATGTTATGAACACTATCGTATTTGTGGAAGATGATGCGGAAGTCGGTTCACTGATTGCCGCGTACCTGGCAAAACATGATATGCAGGTTACCGTAGAGCCGCGCGGCGACCAGGCCGAAGaaa                                                            >  4:327222/1‑275 (MQ=255)

                                                                                                                                                                                                     cGAGCGCGGCTTTGATTACCAGCCCCATCTTTTTACCTTAACACTTCCATAACAAGTCATCAGTAGAATACCTGATGAAAACTTGTTTAGAAACGAt                                                                                                                                                                                                                                             >  8:879202/1‑97 (MQ=255)

                                                                                                                                                                                                     cGAGCGCGGCTTTGATTACCAGCCCCATCTTTTTACCTTAACACTTCCATAACAAGTCATCAGTAGAATACCTGATGAAAACTTGATTAGAAACGATTGATAGTAAGTAAAAACAGCGCGGTGTATTGTGACGTTTTTATATCTACCg                                                                                                                                                                                          <  8:344890/148‑1 (MQ=255)

                                                                                                                                                                                                     cGAGCGCGGCGTTGATTACCAGCCCCAGCTTTTTACCTTAACACTTCCATAACAAGTCATCAGTAGAATACCTGATGAAAACTGGTGTAGAAACGATGGATAGTAAGTAAAAACAGCGCGGTGTATTGTGACGTTTTTATATCTACCGTGAATGTTATGAACACTATCGTATTTGTGGAAGATGATGCGGAAGTCGGTTCACTGATTGCCGCGTACCTGGCAAAACATGATATGCAGGt                                                                                               <  2:486582/239‑1 (MQ=255)

                                                                                                                                                                                                             gCTTTGATTACCAGCCCCATCTTTTTACCTTAACACTTCCATAACAAGTCATCAGTAGGATACCTGATGAAAACTTGTTTAGAAACGATTGATagtaag                                                                                                                                                                                                                                   >  5:915389/1‑99 (MQ=255)

                                                                                                                                                                                                             gCTTTGATTACCAGCCCCATCTTTTTACCTTAACACTTCCATAACAAGTCATCAGTAGAATACCTGATGAAAACTTGTTTAGAAACGATTGATagtaag                                                                                                                                                                                                                                   <  6:915389/99‑1 (MQ=255)

                                                                                                                                                                                                                ttGATTACCAGCCCCATCTTTTTACCTTAACACTTCCATAACAAGTCATCAGgtattctactgatg                                                                                                                                                                                                                                                                 >  7:1103206‑M1/1‑52 (MQ=255)

                                                                                                                                                                                                                ttGATTACCAGCCCCATCTTTTTACCTTAACACTTCCATAACAAGTCATCAGgtattctactgatg                                                                                                                                                                                                                                                                 >  7:324590‑M1/1‑52 (MQ=255)

                                                                                                                                                                                                                ttGATTACCAGCCCCATCTTTTTACCTTAACACTTCCATAACAAGTCATCAGTAGAATACCTGATGAAAACTTGTTTAGAAACGATTGATAGTAAGTAAAAACAGCGCGGTGTATTGTGACGTTTTTATATCTACCGTGAATGTTATg                                                                                                                                                                               >  6:934666/1‑148 (MQ=255)

                                                                                                                                                                                                                    ttACCAGCCCCATCTTTTTACCTTAACACTTCCATAACAAGTCATCAGTAGAATACCTGATGAAAACTTGTTTAGAAACGATTGATagta                                                                                                                                                                                                                                     >  8:230838/1‑90 (MQ=255)

                                                                                                                                                                                                                    ttACCAGCCCCATCTTTTTACCTTAACACTTCCATAACAAGTCATCAGTAGAATACCTGATGAAAACTTGTTTAGAAACGATTGATagta                                                                                                                                                                                                                                     <  7:230838/90‑1 (MQ=255)

                                                                                                                                                                                                                      aCCAGCCCCATCTTTTTACCTTAACACTTCCATAACAAGTCATCAGTAGAATACCTGATGAAAACTTGTTTAGAAACGATTGATAGTAAGTAAAAACAGCGCgg                                                                                                                                                                                                                     >  5:1036885/1‑104 (MQ=255)

                                                                                                                                                                                                                      aCCAGCCCCATCTTTTTACCTTAACACTTCCATAACAAGTCATCAGTAGAATACCTGATGAAAACTTGTTTAGAAACGATTGATAGTAAGTAAAAACAGCGCgg                                                                                                                                                                                                                     <  6:1036885/104‑1 (MQ=255)

                                                                                                                                                                                                                        cAGCCCCATCTTTTTACCTTAACACTTCCATAACAAGTCATCAGTAGAATACCTGATGAAAACTTGTTTAGAAACGATTGATAGTAAGTAAAAACAGCGCGGTGTATTGTGACGttttt                                                                                                                                                                                                    >  7:4207/1‑119 (MQ=255)

                                                                                                                                                                                                                             ccATCTTTTTACCTTAACACTTCCATAACAAGTCATCAGTAGAATACCTGATGAAAACTTGTTTAGAAACGATTGATAGTAAGTAAAAACAGCGCgg                                                                                                                                                                                                                     <  5:134186/97‑1 (MQ=255)

                                                                                                                                                                                                                             ccATCTTTTTACCTTAACACTTCCATAACAAGTCATCAGTAGAATACCTGATGAAAACTTGTTTAGAAACGATTGATAGTAAGTAAAAACAGCGCgg                                                                                                                                                                                                                     >  6:134186/1‑97 (MQ=255)

                                                                                                                                                                                                                              cATCTTTTTACCTTAACACTTCCATAACAAGTCATCAGt                                                                                                                                                                                                                                                                              <  5:15587/39‑1 (MQ=255)

                                                                                                                                                                                                                              cATCTTTTTACCTTAACACTTCCATAACAAGTCATCAGt                                                                                                                                                                                                                                                                              >  6:15587/1‑39 (MQ=255)

                                                                                                                                                                                                                                tCTTTTTACCTTAACACTTCCATAACAAGTCATCAGTAGAATACCTGATGAAAACTTGTTTAGAAACGATTGATAGTAAGTAAAAACAGCGCGGTGTATTGTGACGTTTTtata                                                                                                                                                                                                 >  5:811015/1‑114 (MQ=255)

                                                                                                                                                                                                                                tCTTTTTACCTTAACACTTCCATAACAAGTCATCAGTAGAATACCTGATGAAAACTTGTTTAGAAACGATTGATAGTAAGTAAAAACAGCGCGGTGTATTGTGACGTTTTTATATCTACCGTGAATGtt                                                                                                                                                                                  >  8:1054908/1‑129 (MQ=255)

                                                                                                                                                                                                                                tCTTTTTACCTTAACACTTCCATAACAAGTCATCAGTAGAATACCTGATGAAAACTTGTTTAGAAACGATTGATAGTAAGTAAAAACAGCGCGGTGTATTGTGACGTTTTTATATCTACCGTGAATGTTATGAac                                                                                                                                                                            >  8:422035/1‑135 (MQ=255)

                                                                                                                                                                                                                                    tttACCTTAACACTTCCATAACAAGTCATCAGTAGAATACCTGATGAAAACTTGttt                                                                                                                                                                                                                                                      <  5:724942/57‑1 (MQ=255)

                                                                                                                                                                                                                                    tttACCTTAACACTTCCATAACAAGTCATCAGTAGAATACCTGATGAAAACTTGTTTAGAAACGATTGATAGTAAGTAAAAACAGCGCGGTGTATTGTGACGttttt                                                                                                                                                                                                    <  7:579678/107‑1 (MQ=255)

                                                                                                                                                                                                                                    tttACCTTAACACTTCCATAACAAGTCATCAGTAGAATACCTGATGAAAACTTGTTTAGAAACGATTGATAGTAAGTAAAAACAGCGCGGTGTATTGTGACGttttt                                                                                                                                                                                                    >  8:579678/1‑107 (MQ=255)

                                                                                                                                                                                                                                     ttACCTTAACACTTCCATAACAAGTCATCAGTAGAATACCTGATGAAAACTTGTTTAGAAACGATTGATAGTAAGTAAAAACAGCGCGGTGTATTGTGACGTTTTTATATCTACCg                                                                                                                                                                                          >  6:839676/1‑116 (MQ=255)

                                                                                                                                                                                                                                     ttACCTTAACACTTCCATAACAAGTCATCAGTAGAATACCTGATGAAAACTTGTTTAGAAACGATTGATAGTAAGTAAAAACAGCGCGGTGTATTGTGACGTTTTTATATCTACCg                                                                                                                                                                                          <  5:839676/116‑1 (MQ=255)

                                                                                                                                                                                                                                          ttAACACTTCCATAACAAGTCATCAGTAGAATACCTGATGAAAACTTGTTTAGAAACGATTGATAGTAAGTAAAAACAGCGCGGTGTATTGTGACGTTTTTatat                                                                                                                                                                                                >  7:3892/1‑105 (MQ=255)

                                                                                                                                                                                                                                          ttAACACTTCCATAACAAGTCATCAGTAGAATACCTGATGAAAACTTGTTTAGAAACGATTGATAGTAAGTAAAAACAGCGCGGTGTATTGTGACGTTTTTatat                                                                                                                                                                                                <  8:3892/105‑1 (MQ=255)

                                                                                                                                                                                                                                          ttAACACTTCCATAACAAGTCATCAGTAGAATACCTGATGAAAACTTGTTTAGAAACGATTGATAGTAAGTAAAAACAGCGCGGTGTATTGTGACGTTTTTATATCTACCGTGAATGt                                                                                                                                                                                   >  7:1014066/1‑118 (MQ=255)

                                                                                                                                                                                                                                          ttAACACTTCCATAACAAGTCATCAGTAGAATACCTGATGAAAACTTGTTTAGAAACGATTGATAGTAAGTAAAAACAGCGCGGTGTATTGTGACGTTTTTATATCTACCGTGAATGt                                                                                                                                                                                   <  8:1014066/118‑1 (MQ=255)

                                                                                                                                                                                                                                          ttAACACTTCCATAACAAGTCATCAGTAGAATACCTGATGAAAACTTGTTTAGAAACGATTGATAGTAAGTAAAAACAGCGCGGTGTATTGTGACGTTTTTATATCTACCGTGAATGTTATGAACACTATCGTATTTGTGGAAgatga                                                                                                                                                     >  5:242270/1‑148 (MQ=255)

                                                                                                                                                                                                                                           tAACACTTCCATAACAAGTCATCAGTAGAATACCTGATGAAAACTTGTTTAGAAACGATTGATAGTAAGTAAAAACAGCGCGGTGTATTGTGACGTTTTTATATCTACCGTGAATGTTATGAACACTATCGTATTTGTGGAAGATGATGCGGAAGTCGGTTCa                                                                                                                                     >  4:435164/1‑163 (MQ=255)

                                                                                                                                                                                                                                           tAACACTTCCATAACAAGTCATCAGTAGAATACCTGATGAAAACTTGTTTAGAAACGATTGATAGTAAGTAAAAACAGCGCGGTGTATTGTGACGTTTTTATATCTACCGTGAATGTTATGAACACTATCGTATTTGTGGAAGATGATGCGGAAGTCGGTTCACTGATTGCCGCGTACCTGGCAAAACATGATATGCAGGTTACCGTAGAGCCGCGCGGCGACCAGGCCGAAGAAACCATTTTGc                                                   >  2:515763/1‑245 (MQ=255)

                                                                                                                                                                                                                                              cacTTCCATAACAAGTCATCAGTAGAATACCTGATGAAAACTTGTTTAGAAACGATTGATAGTAAGTAAAAACAGCGCGGTGTATTGTGACGTTTTTATATCTACCGTGAATGTTATGAACACTATCGTATTTGTGGAAGATGATGCGGAAGTCGGTTCACTGATTGcc                                                                                                                            <  2:562149/169‑1 (MQ=255)

                                                                                                                                                                                                                                                cTTCCATAACAAGTCATCAGTAGAATACCTGATGAAAACTTGTTTAGAAACGATTGATAGTAAGTAAAAACAGCGCGGTGTATTGTGACGTTTTTATATCTACCGTGAATGTTATGAACACTATCGTATTtg                                                                                                                                                               >  7:133346/1‑132 (MQ=255)

                                                                                                                                                                                                                                                  tCCATAACAAGTCATCAGTAGAATACCTGATGAAAACTTGTTTAGAAACGATTGATAGTAAGTAAAAACa                                                                                                                                                                                                                           >  5:173233/1‑70 (MQ=255)

                                                                                                                                                                                                                                                  tCCATAACAAGTCATCAGTAGAATACCTGATGAAAACTTGTTTAGAAACGATTGATAGTAAGTAAAAACa                                                                                                                                                                                                                           <  6:173233/70‑1 (MQ=255)

                                                                                                                                                                                                                                                       aaCAAGTCATCAGTAGAATACCTGATGAAAACTTGTTTAGAAACGATTGATAGTAAGTAAAAACAGCGCGGTGTATTGTGACGTTTTTATATCTACCGTGAATGTTATGAACACTATCGTATTTGTGGAAGATGATGCGGAAGTCGGt                                                                                                                                        >  5:551246/1‑148 (MQ=255)

                                                                                                                                                                                                                                                         cAAGTCATCAGTAGAATACctgatgacttgttatggaagtgttaaggtaaaaagatggggctggtaatcaaagccgcgctcggtgcgctggt                                                                                                                                                                                              <  6:589168‑M2/92‑74 (MQ=255)

                                                                                                                                                                                                                                                          aaGTCATCAGTAGAATACCTGATGAAAACTTGTTTAGAAACGATTGATAGTAAGTAAAAACAGCGCGGTGTATTGTGACGTTTTTATATCTACCGTGAATGTTATGAACACTATCGTATTTGTGGAAGATGATGCGGAAGTCGGTTCa                                                                                                                                     <  6:242270/148‑1 (MQ=255)

                                                                                                                                                                                                                                                           aGTCATCAGTAGAGTACCTGATGAAAACTTGTTTAGAAACGATTGATAGTAAGTAAAAACAGCGCGGTGTATTGTGACGTTTTTATATCTACCGTGAATGTTATGAac                                                                                                                                                                            >  6:8046/1‑108 (MQ=255)

                                                                                                                                                                                                                                                           aGTCATCAGTAGAATACCTGATGAAAACTTGTTTAGAAACGATTGATAGTAAGTAAAAACAGCGCGGTGTATTGTGACGTTTTTATATCTACCGTGAATGtt                                                                                                                                                                                  <  5:334827/102‑1 (MQ=255)

                                                                                                                                                                                                                                                           aGTCATCAGTAGAATACCTGATGAAAACTTGTTTAGAAACGATTGATAGTAAGTAAAAACAGCGCGGTGTATTGTGACGTTTTTATATCTACCGTGAATGTTATGAACACTATCGTATTTGTGGAAGATGATGCGGAAGTCGGTTCACTGATTGCCGCGTACCTGGCAAAACATGATATGc                                                                                                   >  3:30347/1‑181 (MQ=255)

                                                                                                                                                                                                                                                           aGTCATCAGTAGAATACCTGATGAAAACTTGTTTAGAAACGATTGATAGCAAGTAAAAACAGCGCGGTGTATTGTGACGTTTTTATATCTACCGTGAATGtt                                                                                                                                                                                  >  6:334827/1‑102 (MQ=255)

                                                                                                                                                                                                                                                             tcatcaGgtagtttaattatgacttgtttgggaaggtttaaggtcaaaagatgtggctggtaatcaaagccgcgctcggtgcgctggtagtgctgttgattggtgttttagcaaaaacgaaaaattattatatcgccgggctgattccacttttcccgacctttgcgcttatcgcgcattatattgttgccagcgaacgcggcattgaagccttacgcgcaaccatcatttttagtatgtggtcgattattccctattttgtttacctggtgtcg   <  4:506688‑M1/275‑269 (MQ=255)

                                                                                                                                                                                                                                                             tcatcaGTAGAATACctgatgacttgttatggaagtgttaaggtaaaaagatggggctggtaatcaaagccgcgctcggtgcgctggtagtgctgttgattggtgttttagcaaaaacgaaaaattattatatcgccgggctgattcc                                                                                                                                  <  7:233030‑M2/148‑134 (MQ=255)

                                                                                                                                                                                                                                                              catcaGTAGAATACctgatgacttgttatggaagtgttaaggtaaaaagatggggctggtaatcaa                                                                                                                                                                                                                   <  8:1103206‑M2/66‑53 (MQ=255)

                                                                                                                                                                                                                                                              catcaGTAGAATACctgatgacttgttatggaagtgttaaggtaaaaagatggggctggtaatcaa                                                                                                                                                                                                                   <  8:324590‑M2/66‑53 (MQ=255)

                                                                                                                                                                                                                                                              catcaGTAGAATACCTGATGAAAACTTGTTTAGAAACGATTGATAGTAAGTAAAAACAGCGCGGTGTATTGTGACGTTTTTATATCTACCGTGAATGTTa                                                                                                                                                                                 >  2:45496/1‑100 (MQ=255)

                                                                                                                                                                                                                                                               atcaGgtattctactgatgacttgttatggaagtgttaaggtaaaaagatggggctggtaatcaaagccgcgctcggtgcgctggt                                                                                                                                                                                              <  6:434343‑M1/86‑82 (MQ=255)

                                                                                                                                                                                                                                                               atcaGgtattctactgatgacttgttatggaagtgttaaggtaaaaagatggggctggtaatcaaagccgcgctcggtgcgctggt                                                                                                                                                                                              >  5:434343‑M1/1‑5 (MQ=255)

                                                                                                                                                                                                                                                               atcaGTAGAATACCTGATGAAAACTTGTTTAGAAACGATTGATAGTAAGTAAAAACAGCGCGGTGTATTGTGACGTTTTTATATCTACCGTGAATGTTATGAACACTATCGTATTTGTGGAAGATGATGCGGAAGTCGGTTCACTGATTGCCGCGTACCTGGCAAAACATGATATGc                                                                                                   >  4:171619/1‑177 (MQ=255)

                                                                                                                                                                                                                                                               atcaGTAGAATACCTGATGAAAACTTGTTTAGAAACGATTGATAGTAAGTAAAAACAGCGCGGTGTATTGTGACGTTTTTATATCTACCGTGAATGTTATGAACACTATCGTATTTGTGGAAGATGATGCGGAAGTCGGTTCACTGATTGCCGCGTACCTGGCAAAACATGATATGCAGGt                                                                                               <  1:30347/181‑1 (MQ=255)

                                                                                                                                                                                                                                                                tcaGTAGAATACCTGATGAAAACTTGTTTAGAAACGATTGATAGTAAGTAAAAACAGCGCGGTGTATTGTGACGTTTTTATATCt                                                                                                                                                                                              >  5:976013/1‑85 (MQ=255)

                                                                                                                                                                                                                                                                 caGgtattctactgatgacttgttatggaagtgttaaggtaaaaagatggggctggta                                                                                                                                                                                                                        <  6:162611‑M1/58‑56 (MQ=255)

                                                                                                                                                                                                                                                                 caGgtattctactgatgacttgttatggaagtgttaaggtaaaaagatggggctggta                                                                                                                                                                                                                        >  5:162611‑M1/1‑3 (MQ=255)

                                                                                                                                                                                                                                                                  aGTAGAATACCTGATGAAAACTTGTTTAGAAACGATTGATAGTAAGTAAAAACAGCGCGGTGTATTGTGACGTTTTTATATCTACCGTGAATGTTATGaa                                                                                                                                                                             <  4:45495/100‑1 (MQ=255)

                                                                                                                                                                                                                                                                   ggtattctactgatgacttgttatggaagtgttaaggtaaaaagatggggctggtaatcaaagccgcgctcggtgcgctggtagtgctgttgattggtg                                                                                                                                                                             <  7:363921‑M1/99‑99 (MQ=255)

CGACACCAGGTAAACAAAATAGGGAATAATCGACCACATACTAAAAATGATGGTTGCGCGTAAGGCTTCAATGCCGCGTTCGCTGGCAACAATATAATGCGCGATAAGCGCAAAGGTCGGGAAAAGTGGAATCAGCCCGGCGATATAATAATTTTTCGTTTTTGCTAAAACACCAATCAACAGCACTACCAGCGCACCGAGCGCGGCTTTGATTACCAGCCCCATCTTTTTACCTTAACACTTCCATAACAAGTCATCAGTAGAATACCTGATGAAAACTTGTTTAGAAACGATTGATAGTAAGTAAAAACAGCGCGGTGTATTGTGACGTTTTTATATCTACCGTGAATGTTATGAACACTATCGTATTTGTGGAAGATGATGCGGAAGTCGGTTCACTGATTGCCGCGTACCTGGCAAAACATGATATGCAGGTTACCGTAGAGCCGCGCGGCGACCAGGCCGAAGAAACCATTTTGCGAGAAAATCCGGATTTGGTGTTACTCGACATCATGCTACCAGGCAAGGA  >  NC_000913/1681806‑1682334

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 11 ≤` `ATCG/ATCG` `< 24 ≤` `ATCG/ATCG` `< 36 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.