New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 3738815 =376 (2.380)25 (0.170) 16/250 NT 7.0% coding (1319/2031 nt) malS alpha‑amylase
?NC_000913 3738835 = 314 (2.120)coding (1339/2031 nt) malS alpha‑amylase

Only 100 of 496 total aligned reads displayed.

ACTGGAAACCTGCCGCCGGGCAAACCTGGCATAGCTTTAACGATTACATTAATTTCAGCGACAAAACAGGCTGGGATAAATGGTGGGGAAAAAACTGGATCAGAACGGATATCGGCGATTACGACAATCCTGGATTCGACGATCTCACTATGTCGCTAGCCTTTTTGCCGGATATCAAAACCGAATCAACTACCGCTTCTGGTCTGCCGGTGTTCTATAAAAACAAAATGGATACCCACGCCAAAGCCATTGACGGCTATACGCCGCGCGATTACTTAACCCACTGGTTAAGTCAGTGGGTCCGCGACTATGGGATTGATGGTTTTCGGGTCGATACCGCCAAACATGTTGAGTTGCCCGCCTGGCAGCAACTGAAAACCGAAGCCAGCGCCGCGCTTCGCGAATGGAAAAAAGCTAACCCCGACAAAGCATT‑AGATGACAAACCTTTCTGGATGACCGGTGAAGCCTGGGGCCACGGCGTGATGCAAAGTGACT‑ACTATCGCCACGGCTTCGATGCGATGATCAATTTCGATTATCAGGA  >  NC_000913/3738542‑3739082
                                                                                                                                                                                                                                                                                 |                                                                                                                                                                                                                                                                             
   ggAAACCTGCCGCCGGGCAAACCTGGCATAGCTTTAACGATTACATTAATTTCAGCGACAAAACAGGCTGGGATAAATGGTGGGGAAAAAACTGGATCAGAACGGATATCGGCGATTACGACAATCCTGGATTCGACGATCTCACTATGTCGCTAGCCTTTTTGCCGGATATCAAAACCGAATCAACTACCGCTTCTGGTCTGCCGGTGTTCTATAAAAACAAAATGGATACCCACGCCAAAGCCATTGACGGCTATACGCCGCGCGATTACTTa                                                                                                                                                                                                                                                                           <  2:437277/275‑1 (MQ=255)
    tcgactgctttcgccgcctgctcctgataatcgaaattgatcatcgcatcgaagccgtggcgatagtagtcactttgcatcacgccgtggccccaggcttcaccggtcatccagaaaggtttgtcatctaatgctttgtcggggttagcttttttccattcgcgaagcgcggcgctggcttcggttttcagttgctgccaggcgggcaactcaacatgtttggcggtatcgacccgaaaaccatcaatcccatagtcgcggacccactgACTTaa                                                                                                                                                                                                                                                                          <  2:96496‑M1/6‑1 (MQ=255)
      gactgctttcgccgcctgctcctgataatcgaaatggatcatggcatcgaagccggggggatagtagtcactttgcatcacgccgtggccccaggcttcaccggtcatccagaaaggtttgtcatctaatgctttgtcggggttagcttttttccattcgcgaagcgcggcgctggcttcggttttcagttgctgccaggcgggcaactcaacatgtttggcggtatcgacccgaaaaccatcaatcccatagtcgcggacccactgACTTAAcc                                                                                                                                                                                                                                                                        >  4:187008‑M1/268‑275 (MQ=255)
        ccTGCCGACGGGCAAACCTGGCATAGCTTTAACGATTACATTAATTTCAGCGACAAAACAGGCTGGGATAAATGGTGGGGAAAAAACTGGTTCAGAACGGATATCGGCGATTACGACAATCCTGGATTCGACGATCTCACTATGTCGCTAGCCTTTTTGCCGGATATCAAAACCGAATCAACTACCGCTTCTGGTCTGCCGGTGTTCTATAAAAACAAAATGGATACCCACGCCAAAGCCATTGACGGCTATACGCCGCGCGATTACTTAACCCa                                                                                                                                                                                                                                                                      <  2:303802/275‑1 (MQ=255)
           gccgccGGGCAAACCTGGCATAGCTTTAACGATTACATTAATTTCAGCGACAAAACAGGCTGGGATAAATGGTGGGGAAAAAACTGGATCAGAACGGATATCGGCGATTACGACAATCCTGGATTCGACGATCTCACTATGTCGCTAGCCTTTTTGCCGGATATCAAAACCGAATCAACTACCGCTTCTGGTCTGCCGGTGTTCTATAAAAACAAAATGGATACCCACGACAAAGCAATTGACGGCTATACGCCGCGCGATTACTTAACCAACTg                                                                                                                                                                                                                                                                   >  2:457680/1‑275 (MQ=255)
              tcgccgcctgctcctgataatcgaaattgatcatcgcatcgaagccgtggcgatagtagtcactttgcatcacgccgtggccccaggcttcaccggtcatccagaaaggtttgtcatctaatgctttgtcggggttagcttttttccattcgcgaagcgcggcgctggcttcggttttcagttgctgccaggcgggcaactcaacatgtttggcggtatcgacccgaaaaccatcaatcccatagtcgcggacccactgACTTa                                                                                                                                                                                                                                                                           <  2:278925‑M1/5‑1 (MQ=255)
                            gCATAGCTTTAACGATTACATAAATTTCAACGACAAAACAGGCTGGGATAAAGGGTGGAGAAAAAACTGGATCAGAACGGATATCGACGATTACGACAATCCTGGATTCAACGATCTCACTATGTCGCTAGCCTTTTTGCCGGATATCAAAACCGAATCAACTACCTCTTCTGGTCTGCCGGTGTTCTATAAAAACAAAATGGATACCCGCGCCAAAGCCATTGACGGCTATACGCCGCGCGATTACTTAACCCACTGGTTAAGTCAGTGGGTcc                                                                                                                                                                                                                                                  <  1:15125/275‑1 (MQ=255)
                                            tACATTAATTTCAGCGACAAAACAGGCTGGGATAAATGGTGGGGAAAAAACTGGATCAGAACGGATATCGGCGATTACGACAATCCTGGATTCGACGATCTCACTATGTCGCTAGCCTTTTTGCCGGATATCAAAACCGAATCAACTACCGCTTCTGGTCTGCCGGTGTTCTATAAAAACAAAATGGATACCCACGCCAAAGCCATTGACGGCTATACGCCGCGCGATTACTTAACCCACt                                                                                                                                                                                                                                                                    >  1:7938/1‑241 (MQ=255)
                                                        aGCGACAAAACAGGCTGGGATAAATGGTGGGGAAAAAACTGGATCAGAACGGATATCGGCGATTACGACAATCCTGGATTCGACGATCTCACTATGTCGCTAGCCTTTTTGCCGGATATCAAAACCGAATCAACTACCGCTTCTGGTCTGCCGGTGTTCTATAAAAACAAAATGGATACCCACGCCAAAGCCATTGACGGCTATACGCCGCGCGATTACTTAACCCACTGGTTAAGTCAGTGGGTCCGCGACTATGGGATTGATGGTTTTCGGGt                                                                                                                                                                                                                      >  2:471458/1‑275 (MQ=255)
                                                             tggcgatagtagtcactttgcatcacgccgtggccccaggcttcaccggtcatccagaaaggtttgtcatctaatgcttagtcggggttagcttttttccattcgcgaagcgcggcgctggcttcggctttcagttgccgccaggcgggcaactcaacatgtttggcggtatccaccctaacaccatcaatcccatagtcgccgacccactgACTTaa                                                                                                                                                                                                                                                                          <  4:287668‑M1/6‑1 (MQ=255)
                                                             cAAAACAGGCTGGGATAAATGGTGGGGAAAAAACTGGATCAGAACGGATATCGGCGATTACGACAATCCTGGATTCGACGATCCCACTATGTCGCTAGCCTTTTTGCCGGATATCAAAACCGAATCAACTACCGCTTCTGGTCTGCCGGTGTTCTATAAAAACAAAATGGATACACACGCCAAAGACATTGACGGCTATACGCCGCGCGATTACTTAACCCACTGGTTAAGCCAGTGGGTCCGCGACTATGGGATTGATGGTTTCCGGGTCGATa                                                                                                                                                                                                                 >  2:390116/1‑275 (MQ=255)
                                                                          gATAAATGGTGGGGAAAAAACTGGATCAGAACGGATATCGGCGATTACGACAATCCTGGATTCGACGATCTCACTATGTCGCTAGCCTTTTTGCCGGATATCAAAACCGAATCAACTACCGCTTCTGGTCTGCCGGTGTTCTATAAAAACAAAATGGATACCCACGCCAAAGCCATTGACGGCTATACGCCGCGCGATTACTTAACCCACTGGTTAAGTCAGTGGGTCCGCGACTATGGGATTGATGGTTTTCGGGTCGATACCGCCAAACATg                                                                                                                                                                                                     >  4:67254/1‑274 (MQ=255)
                                                                                    ggggAAAAAACTGGATCAGAACGGATATCGGCGATTACGACAATCCTGGATTCGACGATCTCACTATGTCGCTAGCCTTTTTGCCGGATATCAAAACCGAATCAACTACCGCTTCTGGTCTGCCGGTGTTCTATAAAAACAAAATGGATACCCACGCCAAAGCCATTGACGGCTATACGCCGCGCGATTACTTAACCCACTGGTTAAGTCAGTGGGTCCGCGACTATGGGATTGATGGTTTTCGGGTCGATACCGCCAAACATGTTGAGTTGc                                                                                                                                                                                            <  2:223503/273‑1 (MQ=255)
                                                                                       gccgtggccccaggcttcaccggtcatccagaaaggtttgtcatctaatgctttgtcggggttagcttttttccattcgcgaagcgcggcgctggcttcggttttcagttgctgccaggcgggcaactcaacatgtttggcggtatcgacccgaaaaccatcaatcccatagtcgcggacccactgACTTa                                                                                                                                                                                                                                                                           <  4:403890‑M1/5‑1 (MQ=255)
                                                                                                  aTCAGAACGGATATCGGCGATTACGACAATCCTGGATTCGACGATCTCACTATGTCGCTAGCCTTTTTGCCGGATATCAAAACCGAATCAACTACCGCTTCTGGTCTGCCGGTGTTCTATAAAAACAAAATGGATACACACGCCAAAGCCATTGACGGCTATACGCCGCGCGATTACTTAACCCAATGGTTAAGTCAGTGGGTTCGACACTATGCGAGTGATGGTTTTCGGGTCGATACCCCCAAACATGTTGGATTTCCCGCCTGGCTGCTAc                                                                                                                                                                             >  4:494182/1‑274 (MQ=255)
                                                                                                                      ttACGACAATCCTGGATTCGACGATCTCACTATGTCGCTAGCCTTTTTGCCGGATATCAAAACCGAATCAACTACCGCTTCTGGTCTGCCGGTGTTCTATAAAAACAAAATGGATACCCACGCCAAAGCCATTGACGGCTATACGCCGCGCGATTACTTAACCCACTGGTTAAGTCAGTGGGTCCGCGACTATGGGATTGATGGTTTTCGGGTCGATACCg                                                                                                                                                                                                              >  3:64065/1‑221 (MQ=255)
                                                                                                                                    gATTCGACGATCTCACTATGTCGCTAGCCTTTTTGCCGGATATCAAAACCGAATCAACTACCGCTTCTGGTCTGCCGGTGTTCTATAAAAACAAAATGGATACCCACGCCAAAGCCATTGACGGCTATACGCCGCGCGATTACTTAACCCACTGGTTAAGTCAGTGGGTCCGCGACTATGGGATTGATGGTTTTCGGGTCGATACCGCCAAACATGTTGAGTTGCCCGCCTGGCAGCAACTGAAAACCGAAGCCAGCCCCGCCCTTcgcgcaag                                                                                                                                           >  4:37036/1‑270 (MQ=255)
                                                                                                                                          acgaTCTCACTATGTCGCTAGCCTTTTTGCCGGATATCAAAACCGAATCAACTACCGCTTCTGGTCTGCCGGTGTTCTATAAAAACAAAATGGATACCCACGCCAAAGCCATTGACGGCTATACGCCGCGCGATTACTTAAcc                                                                                                                                                                                                                                                                        >  8:90150/1‑143 (MQ=255)
                                                                                                                                          acgaTCTCACTATGTCGCTAGCCTTTTTGCCGGATATCAAAACCGAATCAACTACCGCTTCTGGTCTGCCGGTGTTCTATAAAAACAAAATGGATACCCACGCCAAAGCCATTGACGGCTATACGCCGCGCGATTACTTAACCCACTGGTTAAGt                                                                                                                                                                                                                                                            >  2:550822/1‑155 (MQ=255)
                                                                                                                                             aTCTCACTATTTCGCTAGCCTTTTTGCCTGATATCAAAACCGAATCAACTACCGCTTCTGGTCTGCCGGTGTTCTATAAAAACAAAATGGATACCCACGCCAAAGCCATTGACGGCTATACGCCGCGCGATTACTTAACCCACt                                                                                                                                                                                                                                                                    >  8:1020105/1‑144 (MQ=255)
                                                                                                                                              tctcACTATGTCGCTAGCCTTTTTGCCGGATATCAAAACCGAATCAACTACCGCTTCTGGTCTGCCGGTGTTCTATAAAAACAAAATGGATACCCACGCCAAAGCCATTGACGGCTATACGCCGCGCGATTACTTAACCCACTGGTTa                                                                                                                                                                                                                                                               <  7:170511/148‑1 (MQ=255)
                                                                                                                                              tctcACTATGTCGCTAGCCTTTTTGCCGGATATCAAAACCGAATCAACTACCGCTTCTGGTCTGCCGGTGTTCTATAAAAACAAAATGGATACCCACGCCAAAGCCATTGACGGCTATACGCCGCGCGATTACTTAACCCACTGGTTa                                                                                                                                                                                                                                                               <  6:431532/148‑1 (MQ=255)
                                                                                                                                                  aCTATGTCGCTAGCCTTTTTGCCGGATATCAAAACCGAATCAACTACCGCTTCTGGTCTGCCGGTGTTCTATAAAAACAAAATGGATACCCACGCCAAAGCCATTGACGGCTATACGCCGCGCGATTACTTAACCCACTGGTTAAg                                                                                                                                                                                                                                                             >  6:494882/1‑146 (MQ=255)
                                                                                                                                                     aTGTCGCTAGCCTTTTTGCCGGATATCAAAACCGAATCAACTACCGCTTCTGGTCTGCCGGTGTTCTATAAAAACAAAATGGATACCCACGCCAAAGCCATTGACGGCTATACGCCGCGCGATTACTTAACCCa                                                                                                                                                                                                                                                                      >  6:147316/1‑134 (MQ=255)
                                                                                                                                                        tggcctgCCTTTTTGCCGGATATCAAATCGGATCCAACCACCACCTTTGGTCTGGCGGTGTTCTAAAAAAACAAAATGTACACCCACGCCAAAGCAGTTCACGGCTATACGCCGGGTAATTGCTTAACCCGCAGGTTAAGTCAGTGAGGCCGCACCGATGGGTTTGATGGTTGTCGGGTCAATACCGCCAAACATGTTGAGTTGCCCGCCTGGCAGCAACTGAAAACCGAAGCCAGCGCCGCGCTTCGCGAATGGAAAAAAGCTAACCCCGAc                                                                                                                        <  4:111576/267‑1 (MQ=255)
                                                                                                                                                        tCGCTAGCCTTTTTGCCGGATATCAAAACCGAATCAACTACCGCTTCTGGTCTGCCGGTGTTCTATAAAAACAAAATGGATACCCACGCCAAAGCCATTGACGGCTATACGCCGCGCGATTACTTAACCCACTGGTTAAGTCAGTGGGTCCGCGACTATGGGATTGATGGTTTTCGGGTCGATACCGCCAAACATGTTGAGTTGCCCGCCTGGCAGCAACTGAAAACCGAAGCCAGCGCCGCGCTTCGCGAATGGAAAAAAGCTAACCCCGACaa                                                                                                                      >  2:413453/1‑275 (MQ=255)
                                                                                                                                                            tAGCCTTTTTGCCGGATATCAAAACCGAATCAACTACCGCTTCTGGTCTGCCGGTGTTCTATAAAAACAAAATGGATACCCACGCCAAAGCCATTGACGGCTATACGCCGCGCGATTACTTAACCCACTGGTTAAGTCAGTGGGTCCGCGACTATGGGATTGATGGTTTTCGGGTCGATACCGCCAAACATGTTGAGTTGCCCGCCTGGCAGCAACTGAAACCCGAAGACAGCGCCGCCCTTCGCGAATGGCAAAAAGCTAACCCCGACAAAGc                                                                                                                   >  4:96495/1‑274 (MQ=255)
                                                                                                                                                               ccTTTTTGCCGGATATCAAAACCGAATCAACTACCGCTTCTGGTCTGCCGGTGTTCTATAAAAACAAAATGGATACCCACGCCAAAGCCATTGACGGCTATACGCCGCGCGATTACTTAACCCACTGGt                                                                                                                                                                                                                                                                 >  6:655911/1‑129 (MQ=255)
                                                                                                                                                                         ggATATCAAAACCGAATCAACTACCGCTTCTGGTCTGCCGGTGTTCTATAAAAACAAAATGGATACCCACGCCAAAGCCATTGACGGCTATACGCCGCGCGATTACTTAACCCACTGGTTAAGTCAGTGGGTCCGCGACTATGGGATTGATGGTTTTCGGGTCGATACCGCCAAACATGTTGAGTTGCCCGCCTGGCAGCAACTGAAAACCGAAGCCAGCGCCGCGCTTGCCGAATGGAAAAAAGCTAACCCAGACAAAGCATT‑AGATGAAAAAc                                                                                                    >  4:57693/1‑275 (MQ=255)
                                                                                                                                                                          gATATCAAAACCGAATCAACTACCGCTTCTGGTCTGCCGGTGTTCTATAAAAACAAAATGGATACCCACGCCAAAGCCATTGACGGCTATACGCCGCGCGATTACTTAACCCACTGGTTAAGTCAGTGGGTCCGCGACTATGGGATTGATGGTTTTCGGGTCGATACCGCCAAACATGTTGAGTTGCCCGCCTGGCAGCAACTGAAAACCGAAGCCAGCGCCGCGCTTCGCGAATGGAAAAAAGCTAACCCCGACAAAGCATT‑a                                                                                                              <  2:500637/264‑1 (MQ=255)
                                                                                                                                                                                aaaaCCGAATCAACTACCGCTTCTGGTCTGCCGGTGTTCTATAAAAACAAAATGGATACCCACGCCAAAGCCATTGACGGCTATACGCCGCGCGATTACTTa                                                                                                                                                                                                                                                                           >  7:1038617/1‑102 (MQ=255)
                                                                                                                                                                                     cGAATCAACTACCGCTTCTGGTCTGCCGGTGTTCTATAAAAACAAAATGGATACCCACGCCAAAGCCATTGACGGCTATACGCCGCGCGATTACTTAACCCACTGGTTAAGTCAGt                                                                                                                                                                                                                                                        <  5:179744/116‑1 (MQ=255)
                                                                                                                                                                                       aaTCAACTACCGCTTCTGGTCTGCCGGTGTTCTATAAAAACAAAATGGATACCCACGCCAAAGCCATTGACGGCTATACGCCGCGCGATTACTTAACCCACTGGTTAAGTCAGTGGGTCCGCGACTATGGGATTGATGGTTTTCGGGTCGATACCGCCAAACATGTTGAGTTGCCCGCCTGGCAGCAACTGAAAACCGAAGCCAGCGCCGCGCTTCGCGAATGGAAAAAAGCTAACCCCGACAAAGCATT‑AGATGACAAACCTTTCTGGATGAcc                                                                                      >  2:146687/1‑275 (MQ=255)
                                                                                                                                                                                       aaTCAACTACCGCTTCTGGTCTGCCGGTGTTCTATAAAAACAAAATGGATACCCACGCCAAAGCCATTGACGGCTATACGCCGCGCGATTACTTAACCCACTGGTTAAGTCAGTGGGTCCGCGACTATGGGATTGATGGTTTTCGGGTCGATACCGCCAAACATGTTGAGTTGCCCGCCTGGCAGCAACTGAAAACCGAAGCCAGCGCCGCGCTTCGCGAATGGAAAAAAGCTAACCCCGACAAAGCATT‑AGATGACAAACCTTTCTGGATGAca                                                                                      >  2:374041/1‑274 (MQ=255)
                                                                                                                                                                                       aaTCAACTACCGCTTCTGGTCTGCCGGTGTTCTATAAAAACAAAATGGATACCCACGCCAAAGCCATTGACGGCTATACGCCGCGCGATTACTTAACCCACTGGTTAAGTCAGTGGGTCAGCGACTATGGGATTGATGGTTTTCGGGTCGATACCGCCAAACATGTTGAGTTGCCCGCCTGCCAGGAACGGGAAACCGAAGCCAGCCCCGCACTTCGCGGAAGGAAAAAAGGAAACCCCGACAAAGCATTGAGAT‑ACAACCCTGTCAGGAGGAcc                                                                                      >  4:333998/1‑275 (MQ=255)
                                                                                                                                                                                        tcggttttcagttgctgccaggcgggcaactcaacatgtttgtcggtatcgacccgaaaaccatcaatcccatagtcgcggacccactgACTTaa                                                                                                                                                                                                                                                                          <  8:412053‑M1/6‑1 (MQ=255)
                                                                                                                                                                                        tcggttttcagttgctgccaggcgggcaactcaacatgtttggcggtatcgacccgaaaaccatcaatcccatagtcgcggacccactgACTTaa                                                                                                                                                                                                                                                                          >  7:412053‑M1/90‑95 (MQ=255)
                                                                                                                                                                                        aTCAACTACCGCTTCTGGTCTGCCGGTGTTCTATAAAAACAAAATGGATACCCACGCCAAAGCCATTGACGGCTATACGCCGCGCGATTACTTAACCCACTGGTTAAGTCAGTGGGTCCGCGACTATGGGATTGATGGTTTTCGGGTCGATACCGCCAAACCTGTTGAGTTGCCCGCCTGGCAGCAACTGAAAACCGAAGCCAGCGCCGCGCTTCGCGAATGGAAAAAAGCTAACCCCGACAAAGCATT‑AGATTACAAACCTTTCTGGATGAcc                                                                                      >  2:18629/1‑274 (MQ=255)
                                                                                                                                                                                            aCTACCGCTTCTGGTCTGCCGGTGTTCTATAAAAACAAAATGGATACCCACGCCAAAGCCATTGACGGCTATACGCCGCGCGATTAc                                                                                                                                                                                                                                                                              >  6:312235/1‑87 (MQ=255)
                                                                                                                                                                                            aCTACCGCTTCTGGTCTGCCGGTGTTCTATAAAAACAAAATGGATACCCACGCCAAAGCCATTGACGGCTATACGCCGCGCGATTACTTaa                                                                                                                                                                                                                                                                          >  5:405371/1‑91 (MQ=255)
                                                                                                                                                                                                ccGCTTCTGGTCTGCCGGTGTTCTATAAAAACAAAATGGATACCCACGCCAAAGCCATTGACGGCTATACGCCGCGCGATTACTTAACCCACTGGTTAAGTCAGTGGGTCCGCGACTATGGGATTGATGGTTTTCGGGTCGATACCGCCAAACATGTTGAGTTGCCCGCCTGGCAGCAACTGAAAACCGAAGCCAGCGCCGCGCTTCGCGAATGGAAAAAAGCTAACCCCGACAAAGCATT‑AGATGACAAACCTTTCTGGATGACCGGTGAAGcc                                                                             >  2:518287/1‑275 (MQ=255)
                                                                                                                                                                                                 cGCTTCTGGTCTGCCGGTGTTCTATAAAAACAAAATGGATACCCACGCCAAAGCCATTGACGGCTATACGCCGCGCGATTa                                                                                                                                                                                                                                                                               <  8:1110505/81‑1 (MQ=255)
                                                                                                                                                                                                   cTTCTGGTCTGCCGGTGTTCTATAAAAACAAAATGGATACCCACGCCAAAGCCATTGACGGCTATACGCCGCGCGATTACTTAACCCACTGGTTAAGTCAGTGGGt                                                                                                                                                                                                                                                    >  1:108263/1‑106 (MQ=255)
                                                                                                                                                                                                    tgctgccaggcgggcaactcaacatgtttggcggtatcgacccgaaaaccatcaatcccatagtcgcggacccactgACTTAACCCACTGGTTAAGTc                                                                                                                                                                                                                                                           <  7:133646‑M1/21‑1 (MQ=255)
                                                                                                                                                                                                          tCTGCCGGTGTTCTATAAAAACAAAATGGATACCCACGCCAAAGCCATTGACGGCTATACGCCGCGCGATTACTTAACCCACTGGTTAAGTCAg                                                                                                                                                                                                                                                         >  6:622181/1‑94 (MQ=255)
                                                                                                                                                                                                           cTGCCGGTGTTCTATAAAAACAAAATGGATACCCACGCCAAAGCCATTGACGGCTATACGCCGCGCGATTACTTAACCCACTGGTTAAGTCAGTGGGTCCGCGACTATGGGATTGATGGTTTTCggg                                                                                                                                                                                                                       >  8:158420/1‑127 (MQ=255)
                                                                                                                                                                                                            ggcgggcaactcaacatgtttggcggtatcgacccgaaaaccatcaatcccatagtcgcggacccactgACTTaa                                                                                                                                                                                                                                                                          <  7:761549‑M1/6‑1 (MQ=255)
                                                                                                                                                                                                            ggcgggcaactcaacatgtttggcggtatcgacccgaaaaccatcaatcccatagtcgcggacccactgACTTAAcc                                                                                                                                                                                                                                                                        >  7:726189‑M1/70‑77 (MQ=255)
                                                                                                                                                                                                             gCCGGTGTTCTATAAAAACAAAATGGATACCCACGCCAAAGCCATTGACGGCTATACGCCGCGCGATTACTTAACCCACTGGTTAAGTCAGTGGGTCCGCGACTAt                                                                                                                                                                                                                                          >  6:111144/1‑106 (MQ=255)
                                                                                                                                                                                                              ccGGTGTTCTATAAAAACAAAATGGATACCCACGCCAAAGCCATTGACGGCTATACGCCGCGCGATTACTTAACCCACTGGTTAAGTCAGTGGGTCCGCGACTATGGGATTGATGGTTTTCGGGTCGATACCGCCAAACATGTTGAGTTGCCCGCCTGGCAGCAACTGAAAACCGAAGCCAGCGCCGCGCTTCGCGAATGGAAAAAAGCTAACCCCGACAAAGCATT‑AGATGACAAACCTTTCTGGATGACCGGTGAAGCCTGGGGCCACGGCGt                                                               <  2:65733/275‑1 (MQ=255)
                                                                                                                                                                                                                  tgtTCTATAAAAACAAAATGGATACCCACGCCAAAGCCATTGACGGCTATACGCCGCGCGATTACTTAACCCACTGGTTAAGTCAGt                                                                                                                                                                                                                                                        >  6:408395/1‑87 (MQ=255)
                                                                                                                                                                                                                          aaaaaCAAAATGGATACCCACGCCAAAGCCATTGACGGCTATACGCCGCGCGATTACTTAACCCACTGGTTAAGTCAg                                                                                                                                                                                                                                                         >  6:742388/1‑78 (MQ=255)
                                                                                                                                                                                                                            aaaCAAAATGGATACCCACGCCAAAGCCATTGACGGCTATACGCCGCGCGATTACTTAACCCACTGGTTAAGTCAGTGGGTCCGCGACTATgg                                                                                                                                                                                                                                        <  5:484060/93‑1 (MQ=255)
                                                                                                                                                                                                                             aaCAAAATGGATACCCACGCCAAAGCCATTGACGGCTATACGCCGCGCGATTACTTAACCCACTGGTTAAGTCAGTGGGTCCGCGACTATGGGa                                                                                                                                                                                                                                      >  8:688337/1‑94 (MQ=255)
                                                                                                                                                                                                                              aCAAAATGGATACCCACGCCAAAGCCATTGACGGCTATACGCCGCGCGATTa                                                                                                                                                                                                                                                                               >  5:562538/1‑52 (MQ=255)
                                                                                                                                                                                                                                aaaaTGGATACCCACGCCAAAGCCATTGACGGCTATACGCCGCGCGATTACTTAACCCACTGGTTAAGTCAGTGGGTCCGCGACTATGGGATTGATGGTTTTCGGGt                                                                                                                                                                                                                      >  7:525894/1‑107 (MQ=255)
                                                                                                                                                                                                                                 aaaTGGATACCCACGCCAAAGCCATTGACGGCTATACGCCGCGCGATTACTTAACCAGTGGGTTAAGta                                                                                                                                                                                                                                                           <  5:6462/69‑2 (MQ=38)
                                                                                                                                                                                                                                   aTGGATACCCACGCCAAAGCCATTGACGGCTATACGCCGCGCGATTACTTAACCCACTGGTTAAGTCAGTGGGTCCGCGACTATGGGATTGAt                                                                                                                                                                                                                                 <  5:354795/93‑1 (MQ=255)
                                                                                                                                                                                                                                   aTGGATACCCACGCCAAAGCCATTGACGGCTATACGCCGCGCGATTACTTAACCCACTGGTTAAGTCAGTGGGTCCGCGACTATGGGATTGATGGTTTTCGGGTCGATACCGCCAAACATGTTGAGTTGCCCGcc                                                                                                                                                                                       <  8:1073942/135‑1 (MQ=255)
                                                                                                                                                                                                                                      gATACCCACGCAAAAGCCATTGACGGCTAGACGCCGCGCGATTACTTAACCCACTGGTTAAGTCAGTGGGGCCGCGACTATGGGATTGATGGTTTTCGGGTCGATACCGCCAAACATGTTGAGTTGCCCGCCTGGCAGCAACTGAAAACCGAAGCCAGCGCCGCGCTTCGCGAATGGAAAAAAGCTAACCCCGACAAAGCATT‑AGATGACAAACCTTTCTGGATGACCGGTGAAGCCTGGGGCCACGGCGTGATGCAAAGTGACT‑ACTATCGCCa                                      <  2:77727/275‑1 (MQ=255)
                                                                                                                                                                                                                                          cccACGCCAAAGCCATTGACGGCTATACGCCGCGCGATTACTTAACCCACTgg                                                                                                                                                                                                                                                                  <  7:818098/53‑1 (MQ=255)
                                                                                                                                                                                                                                            cACGCCAAAGCCATTGACGGCTATACGCCGCGCGATTACTTAACCCACTGGTTAAGTCAGTGGGTCCGCGACTATGGGATTGATGGTTTTCGGGTCg                                                                                                                                                                                                                    >  7:947491/1‑97 (MQ=255)
                                                                                                                                                                                                                                            cACGCCAAAGCCATTGACGGCTATACGCCGCGCGATTACTTAACCCACTGGTTAAGTCAGTGGGTCCGCGACTATGGGATTGATGGTTTTCGGGTCg                                                                                                                                                                                                                    <  8:947491/97‑1 (MQ=255)
                                                                                                                                                                                                                                            cACGCCAAAGCCATTGACGGCTATACGCCGCGCGATTACTTAACCCACTGGTTAAGTCAGTGGGTCCGCGACTATGGGATTGATGGTTTTCGGGTCg                                                                                                                                                                                                                    <  5:873813/97‑1 (MQ=255)
                                                                                                                                                                                                                                            cACGCCAAAGCCATTGACGGCTATACGCCGCGCGATTACTTAACCCACTGGTTAAGTCAGTGGGTCCGCGACTATGGGATTGATGGTTTTCGGGTCGATa                                                                                                                                                                                                                 <  8:530716/100‑1 (MQ=255)
                                                                                                                                                                                                                                            cACGCCAAAGCCATTGACGGCTATACGCCGCGCGATTACTTAACCCACTGGTTAAGTCAGTGGGTCCGCGACTATGGGATTGATGGTTTTCGGGTCGATACCGCCAAACATGt                                                                                                                                                                                                    >  8:459468/1‑113 (MQ=255)
                                                                                                                                                                                                                                            cACGCCAAAGCCATTGACGGCTATACGCCGCGCGATTACTTAACCCACTGGTTAAGTCAGTGGGTCCGCGACTATGGGATTGATGGTTTTCGGGTCGATACCGCCAAACATGt                                                                                                                                                                                                    <  7:459468/113‑1 (MQ=255)
                                                                                                                                                                                                                                            cACGCCAAAGCCATTGACGGCTATACGCCGCGCGATTACTTAACCCACTGGTTAAGTCAGTGGGTCCGCGACTATGGGATTGATGGTTTTCGGGTCGATACCGCCAAACATGTTGAGTTGCCCGGCTGGCAGCAACTGaaaa                                                                                                                                                                       <  8:762089/142‑1 (MQ=255)
                                                                                                                                                                                                                                                   aaGCCATTGACGGCTCTACGCCGCGCGATTACTTAACCCACTGGTTAAGTCAGTGGGTCCGCGACTATGGGATTGATGGTTTTCGGGTCGATACCGCCAAACATg                                                                                                                                                                                                     <  7:1079897/105‑1 (MQ=255)
                                                                                                                                                                                                                                                   aaGCCATTGACGGCTATACGCCGCGCGATTACTTAACCCACTGGTTAAGTCAGTGGGTCCGCGACTATg                                                                                                                                                                                                                                         >  5:816021/1‑69 (MQ=255)
                                                                                                                                                                                                                                                   aaGCCATTGACGGCTATACGCCGCGCGATTACTTAACCCACTGGTTAAGTCAGTGGGTCCGCGACTATGGGATTGATGGTTTTCGGGTCGATACCGCCAAACATGTTGAGTTGCCCGCCTGGCAGCaa                                                                                                                                                                              <  6:8359/128‑1 (MQ=255)
                                                                                                                                                                                                                                                    aGCCATTGACGGCTATACGCCGCGCGATTACTTAACCCACTGGTTAAGTCAGTGGGTCCGCGACTATGGGATTGATGGTTTTCggg                                                                                                                                                                                                                       <  7:686996/86‑1 (MQ=255)
                                                                                                                                                                                                                                                    aGCCATTGACGGCTATACGCCGCGCGATTACTTAACCCACTGGTTAAGTCAGTGGGTCCGCGACTATGGGATTGATGGTTTTCGGGTCGATACCGCCAAACATGTTGAGTTGCCCGCCTGGCAGCAACTGAAAACCGAAGCCAGCGCCGCGCTTCGCGAATGGAAAAAAGCTAACCCCGACAAAGCATT‑AGATGACAAACCTTTCTGGATGACCGGTGAAGCCTGGGGCCACGGCGTGATGCAAAGTGACT‑ACTATCGCCACGGCTTcgatgcga                        >  4:247071/1‑275 (MQ=255)
                                                                                                                                                                                                                                                      atcaatcccatagtcgcggacccactgACTTAACCCACTGGTTAAg                                                                                                                                                                                                                                                             >  7:376318‑M1/28‑46 (MQ=255)
                                                                                                                                                                                                                                                      atcaatcccatagtcgcggacccactgACTTAACCCACTGGTTAAg                                                                                                                                                                                                                                                             <  8:376318‑M1/19‑1 (MQ=255)
                                                                                                                                                                                                                                                       tcaatcccatagtcgcggacccactgACTTAACCCACTGGt                                                                                                                                                                                                                                                                 <  7:88905‑M1/15‑1 (MQ=255)
                                                                                                                                                                                                                                                        caatcccatagtcgcggacccactgACTTAACCCACTGGTTaa                                                                                                                                                                                                                                                              <  8:32892‑M1/18‑1 (MQ=255)
                                                                                                                                                                                                                                                        aTTGACGGCTATACGCCGCGCGATTACTTAACCCACTGGTTAAGTCAGTGGGTCCGCGACTATGGGATTGATGGTTTTCGGGTCGATACCGCCAAACATGTTGAGTTGCCCGCCTg                                                                                                                                                                                     >  5:1039424/1‑116 (MQ=255)
                                                                                                                                                                                                                                                         ttGACGGCTATACGCCGCGCGATTACTTAACCCACTGGTTAAGTCAGTGGGTCCGCGACTATGGGATTGATGGTTTTCGGGTCGATACCGCCAAACATGTTGAGTTGCCCGCCTGGCAGCAACTGAAAACCGAAGCCAGCGCCGCGCTTCGCGAATGGAAAAAAGCTAACCCCGACAAAGCATT‑AGATGACAAACCTTTCTGGATGACCGGTGAAGCCTGGGGCCATGGCGTGATGCAAAGTGACT‑ACTATCGCCACGGCTTCGATGCgatgacc                   >  2:348874/1‑273 (MQ=255)
                                                                                                                                                                                                                                                         ttGACGGCTATACGCCGCGCGATTACTTAACCCACTGGTTAAGTCAGTGGGTCCGCGACTATGGGATTGATGGTTTTCGGGTCGATACCGCCAAACATGTTGAGTTGCCCGCCTGGCAGCAACTGAAAACCGAAGCCAGCGCCGCGCTCCGCGAATGGCAAAAAGCTAAACCCGACAAAGCATT‑AGATGACAAACCTTTCTGGATGAACGGTGAAGCCGGGGGCCACGGCGTGATGAAAAGTGACTCACTA‑CGCCACGGCTTTGATGCgatgaac                   >  4:437238/1‑273 (MQ=255)
                                                                                                                                                                                                                                                          tGACGGCTATACGCCGCGCGATTACTTAACCCACTGGTTAAGTCAGTGGGTCCGCGACTATGGGAt                                                                                                                                                                                                                                     <  6:1072502/66‑1 (MQ=255)
                                                                                                                                                                                                                                                            aCGGCGATACGCCGCGCGATTACTTAACCCACTGGTTAAGTCAGTGGGTCCGCGACTATGGGATTGATGGTTTTCGGGTCGATACCGCCAAACATGTTGAGTTGCCCGCCTGGCAGCAACTGAAAACCGAAGCCAGCGCCGCGCTTCGCGAATGGAAAAAAGCTAACCCCGACAAAGCATT‑AGATGACAAACCTTTCTGGATGACCGGTGAAGCCTGGGGCCACGGCGTGATGCAAAGTGACT‑ACTATCGCCACGGCTTCGATGCGATGATCAAt                <  2:258180/275‑1 (MQ=255)
                                                                                                                                                                                                                                                             cGGCTATACGCCGCGCGATTACTTAACCCACTGGTTAAGTCAGTGGGTCCGCGACTATGGGATTGATGGTTTTCggg                                                                                                                                                                                                                       <  7:323345/77‑1 (MQ=255)
                                                                                                                                                                                                                                                               gCTATACGCCGCGCGATTACTTAACCCACTGGTTAAGTCAGTGGGTCCGCGACTATGGGATTGATGGTTTTCGGGTCGATACCGCCAAACAt                                                                                                                                                                                                      <  6:1003267/92‑1 (MQ=255)
                                                                                                                                                                                                                                                                 tataCGCCGCGCGATTACTTAACCCACTGGTTAAGTCAGTGGGTCCGCGACTATGGGATTGATGGTTTTCGGGTCGATACCGCCAAACATGt                                                                                                                                                                                                    <  6:209681/92‑1 (MQ=255)
                                                                                                                                                                                                                                                                  ataCGCCGCGCGATTACTTAACCCACTGGTTAAGTCAGTGGGTCCGCGACTATGGGATTGATGGTTTTCGGGTCGATACCGCCAAACATGTTGAGTTGCCCGCCTGGCAGCAACTGAAAACCGAAGCCAGCGCCGCGCTTCGCGa                                                                                                                                              >  5:727866/1‑145 (MQ=255)
                                                                                                                                                                                                                                                                        cgcgcgATTACTTAACCCACTGGTTAAGTCAGTGGGTCCGCGACTATGGGATTGATGGTTTTCGGGTCGATACCGCCAAACATGTTGAGTTGCCCGCCTGGCAGCAACTGAAAACCGAAGCCAGCGCCGCGCTTCGCGAATGGaaaaa                                                                                                                                     <  5:1095074/148‑1 (MQ=255)
                                                                                                                                                                                                                                                                        cgcgcgATTACTTAACCCACTGGTTAAGTCAGTGGGTCCGCGACTATGGGATTGATGGTTTTCGGGTCGATACCGCCAAACATGTTGAGTTGCCCGCCTGGCAGCAACTGAAAACCGAAGCCAGCGCCGCGCTTCGCGAATGGaaaaa                                                                                                                                     <  5:233199/148‑1 (MQ=255)
                                                                                                                                                                                                                                                                         gcgcgATTACTTAACCCACTGGTTAAGTCAGTGGGTCCGCGACTATGGGATTGAt                                                                                                                                                                                                                                 <  8:842358/55‑1 (MQ=255)
                                                                                                                                                                                                                                                                         gcgcgATTACTTAACCCACTGGTTAAGTCAGTGGGTCCGCGACTATGGGATTGATGGTTTTCGGGTCGATACCGCCAAACATGTTGa                                                                                                                                                                                                 <  5:305490/87‑1 (MQ=255)
                                                                                                                                                                                                                                                                         gcgcgATTAATTAACCCACTGGTTAAGTCAGTGGGTCCGCGACTATGGGATTGATGGTTTTCGGGTCGATACCGCCAAACATGTTGAGt                                                                                                                                                                                               >  8:739675/1‑89 (MQ=255)
                                                                                                                                                                                                                                                                          cgcgATTACTTAACCCACTGGTTAGGTCAGTGGGTCCGCGACTATGGGATTGATGGTTTTCGGGTCGATACCGTCAAACATGTTGAGTTGCCCGACTGGCAGCAACTGAAAACCGAAGCCAGCGTCGCGCTTCGCGAATGGAAAAAAGCTAACCCCCAAAAAGCATT‑AGATGACAAACCTTGCTGGATGACCGGTCAAGCCTGGGGCCACGGCGTGATGCAAAGTGACT‑ACGAGCGCCGAGGAGTCGCAGCGATCACGAATTTCGAtgtttagga  >  4:527994/1‑267 (MQ=255)
                                                                                                                                                                                                                                                                          cgcgATTACTTAACCCACTGGTTAAGTCAGTGGGTCCGCGACTATGGGATTGATGGTTTTCGGGTCGATACCGCCAAACATGTTGAGTTGCCCGCCTGGCAGCAACTGAAAACCGAAGCCAGCGCCGCGCTTCGCGAATGGAAAAAAGCTAACCCCGACAAAGCATT‑AGATGACAAACCTTTCTGGATGACCGGTGAAGCCTGGGGCCACGGCGTGATGCAAAGTGACT‑ACTATc                                          >  1:61334/1‑235 (MQ=255)
                                                                                                                                                                                                                                                                            cgATTACTTAACCCACTGGTTAAGTCAGTGGGTCCGCGACTATGGGATTGATGGTTTTCGGGTCGATACCGCCAAACATGTTGAGTTGCCCGCCTGGCAGCAACTGAAAACCGa                                                                                                                                                                   <  5:132410/114‑1 (MQ=255)
                                                                                                                                                                                                                                                                              aTTACTTAACCCACTGGTTAAGTCAGTGGGTCCGCGACTATGGGATTGATGGTTTTCGGGTCGATACCGCCAAACATGTTGAGTTGCCCGCCTGGCAGCAACTGaaaa                                                                                                                                                                       >  7:60477/1‑108 (MQ=255)
                                                                                                                                                                                                                                                                              aTTACTTAACCCACTGGTTAAGTCAGTGGGTCCGCGACTATGGGATTGATGGTTTTCGGGTCGATACCGCCAAACATGTTGAGTTGCCCGCCTGGCAGCAACTGaaa                                                                                                                                                                        >  6:990051/1‑107 (MQ=255)
                                                                                                                                                                                                                                                                              aTTACTTAACCCACTGGTTAAGTCAGTGGGTCCGCGACTATGGGATTGATGGTTTTCGGGTCGATACCGCCAAACATGTTGAGTTGCCCGCCTGGCAGCAACTGAAAACCGa                                                                                                                                                                   >  6:272367/1‑112 (MQ=255)
                                                                                                                                                                                                                                                                              aTTACTTAACCCACTGGTTAAGTCAGTGGGTCCGCGACTATGGGATTGATGGTTTTCGGGTCGATACCGCCAAACATGTTGAGTTGCCCGCCTGGCAGCAACTGAAAACCGAAGCCAGCGCCGCGCTTCGCGAATg                                                                                                                                           >  5:413973/1‑136 (MQ=255)
                                                                                                                                                                                                                                                                                tACTTAACCCACTGGTTAAGTCAGTGGGTCCGCGACTATGGGATTGATGGTTTTCGGGTCGATACCGCCAAACATGTTGAGTTGCCCGCCTGGCAGCAACTGAAAACCGa                                                                                                                                                                   >  8:639369/1‑110 (MQ=255)
                                                                                                                                                                                                                                                                                 ACTTAACCCACTGGTTAAGTCAGTGGGTCCGCGACTATGGGATTGATGGTTTTCgg                                                                                                                                                                                                                        <  6:371989‑M1/56‑1 (MQ=255)
                                                                                                                                                                                                                                                                                 |                                                                                                                                                                                                                                                                             
ACTGGAAACCTGCCGCCGGGCAAACCTGGCATAGCTTTAACGATTACATTAATTTCAGCGACAAAACAGGCTGGGATAAATGGTGGGGAAAAAACTGGATCAGAACGGATATCGGCGATTACGACAATCCTGGATTCGACGATCTCACTATGTCGCTAGCCTTTTTGCCGGATATCAAAACCGAATCAACTACCGCTTCTGGTCTGCCGGTGTTCTATAAAAACAAAATGGATACCCACGCCAAAGCCATTGACGGCTATACGCCGCGCGATTACTTAACCCACTGGTTAAGTCAGTGGGTCCGCGACTATGGGATTGATGGTTTTCGGGTCGATACCGCCAAACATGTTGAGTTGCCCGCCTGGCAGCAACTGAAAACCGAAGCCAGCGCCGCGCTTCGCGAATGGAAAAAAGCTAACCCCGACAAAGCATT‑AGATGACAAACCTTTCTGGATGACCGGTGAAGCCTGGGGCCACGGCGTGATGCAAAGTGACT‑ACTATCGCCACGGCTTCGATGCGATGATCAATTTCGATTATCAGGA  >  NC_000913/3738542‑3739082

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.