| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 2327300 = | 35 (0.370) | 10 (0.120) | 7/174 | NT | 28.0% | intergenic (+7/+67) | atoB/yfaP | acetyl‑CoA acetyltransferase/DUF2135 family protein, putative host defense protein |
| ? | NC_000913 | 2327334 = | 21 (0.260) | intergenic (+41/+33) | atoB/yfaP | acetyl‑CoA acetyltransferase/DUF2135 family protein, putative host defense protein | |||||
AACAGGAAACATTTATTGTACCGATGCGTAATGCTGGCGAGCTGACGCTGGTGAAAAGTTTTGACTGGTGATTAATGGGGTTACCTTCGCCGTCGATGTTCAAGAAAACACCCGATAACTTTCGCTATCGGGTGTTTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/2327437‑2327300‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tatcgggtgttttCTTGAACATCGACGGCGAAGGTAACCCCATTAATCACCAGTCAAAACTTTTCACCAGCGTCAGCTCGCCAGCATTACGCATCGGTACAATAAATGTTTCCTGTTTCTCATTGACCGATCCTTCATCGGTGATCAGCGTCAGTTGG > NC_000913/2327334‑2327478 AACAGGAAACATTTATTGTACCGATGCGTAATGCTGGCGAGCTGACGCTGGTGAAAAGTTTTGACTGGTGATTAATGGGGTTACCTTCGCCGTCGATGTTCAAGAAAACACCCGATAACTTTCGCTATC < 3:411662/129‑1AACAGGAAACATTTATTGTACCGATGCGTAATGCTGGCGAGCTGACGCTGGTGAAAAGTTTTGACTGGTGATTAATGGGGTTACCTTCGCCGTCGATGTTCAAGAAAACACCCGATAACTTTCGCTATC > 4:411662/1‑129 CAGGAAACATTTATTGTACCGATGCGTAATGCTGGCGAGCTGACGCTGGTGAAAAGTTTTGACTGGTGATTAATGGGGTTACCTTCGCCGTCGATGTTCAAGAAAACACCCGATAACTTTCGCTATCG < 3:1123529/128‑1 CAGGAAACATTTATTGTACCGATGCGTAATGCTGGCGAGCTGACGCTGGTGAAAAGTTTTGACTGGTGATTAATGGGGTTACCTTCGCCGTCGATGTTCAAGAAAACACCCGATAACTTTCGCTATCG > 4:1123529/1‑128 CATTTATTGTACCGATGCGTAATGCTGGCGAGCTGACGCTGGTGAAAAGTTTTGACTGGTGATTAATGGGGTTACCTTCGCCGTCGATGTTCAAGAAAACACCCGATAACTTTCGCTATCG < 3:772195/121‑1 CATTTATTGTACCGATGCGTAATGCTGGCGAGCTGACGCTGGTGAAAAGTTTTGACTGGTGATTAATGGGGTTACCTTCGCCGTCGATGTTCAAGAAAACACCCGATAACTTTCGCTATCG > 4:772195/1‑121 ACCGATGCGTAATGCTGGCGAGCTGACGCTGGTGAAAAGTTTTGACTGGTGATTAATGGGGTTACCTTCGCCGTCGATGTTCAAGAAAACACCCGATAACTTTCGCTATCGGGTGTT < 1:459263/117‑1 ACCGATGCGTAATGCTGGCGAGCTGACGCTGGTGAAAAGTTTTGACTGGTGATTAATGGGGTTACCTTCGCCGTCGATGTTCAAGAAAACACCCGATAACTTTCGCTATCGGGTGTT > 2:459263/1‑117 CTGGTGAAAAGTTTTGACTGGTGATTAATGGGGTTACCTTCGCCGTCGATGTTCAAGAAAACACCCGATAACTTTCGCTATCGGGTGTTTT > 1:1118948/1‑91 CTGGTGAAAAGTTTTGACTGGTGATTAATGGGGTTACCTTCGCCGTCGATGTTCAAGAAAACACCCGATAACTTTCGCTATCGGGTGTTTT < 2:777834/91‑1 CTGGTGAAAAGTTTTGACTGGTGATTAATGGGGTTACCTTCGCCGTCGATGTTCAAGAAAACACCCGATAACTTTCGCTATCGGGTGTTTT < 2:1118948/91‑1 CTGGTGAAAAGTTTTGACTGGTGATTAATGGGGTTACCTTCGCCGTCGATGTTCAAGAAAACACCCGATAACTTTCGCTATCGGGTGTTTT > 1:777834/1‑91 AGTTTTGACTGGTGATTAATGGGGTTACCTTCGCCGTCGATGTTCAAGAAAACACCCGATAACTTTCGCTATCGGGTGTT > 2:370765/1‑80 AGTTTTGACTGGTGATTAATGGGGTTACCTTCGCCGTCGATGTTCAAGAAAACACCCGATAACTTTCGCTATCGGGTGTT < 1:370765/80‑1 CTGGTGATTAATGGGGTTACCTTCGCCGTCGATGTTCAAGAAAACACCCGATAACTTTCGCTATCGGGT < 4:1040668/69‑1 CTGGTGATTAATGGGGTTACCTTCGCCGTCGATGTTCAAGAAAACACCCGATAACTTTCGCTATCGGGT > 3:1040668/1‑69 CCCGATAACTTTCGCTATCGGGTGTTTTCTTGAACATCGACGGCGAAGGTAACCCCATTAATCACCAGTCAAA < 2:347618/73‑1 CCCGATAACTTTCGCTATCGGGTGTTTTCTTGAACATCGACGGCGAAGGTAACCCCATTAATCACCAGTCAAA > 1:347618/1‑73 CCCGATAACTTTCGCTATCGGGTGTTTTCTTGAACATCGACGGCGAAGGTA > 4:426238/1‑51 CCCGATAACTTTCGCTATCGGGTGTTTTCTTGAACATCGACGGCGAAGGTA < 3:426238/51‑1 CGATAACTTTCGCTATCGGGTGTTTTCTTGAACATCGACGGCGAAGGTAACCCCATTAATCACCAGTCAAAACTTTTCACCAGCGTCAGCTCGCCAGCATTACGCATCGGTACAATAAATGTTTC > 3:812623/1‑125 CGATAACTTTCGCTATCGGGTGTTTTCTTGAACATCGACGGCGAAGGTAACCCCATTAATCACCAGTCAAAACTTTTCACCAGCGTCAGCTCGCCAGCATTACGCATCGGTACAATAAATGTTTC < 4:812623/125‑1 TTTCGCTATCGGGTGTTTTCTTGAACATCGACGGCGAAGGTAACCCCAT < 3:1071677/49‑1 TTTCGCTATCGGGTGTTTTCTTGAACATCGACGGCGAAGGTAACCCCAT > 4:1071677/1‑49 TTTCGCTATCGGGTGTTTTCTTGAACATCGACGGCGAAGGTAACCCCAT > 2:151842/1‑49 TTTCGCTATCGGGTGTTTTCTTGAACATCGACGGCGAAGGTAACCCCAT < 1:151842/49‑1 GTGTTTTCTTGAACATCGACGGCGAAGGTAACCCCATTAATCACCAGTCAAAACTTTTCACCAGCGTCAGCTCGCCAGCATTACGCATCGGTACAATAAA > 2:917219/1‑100 GTGTTTTCTTGAACATCGACGGCGAAGGTAACCCCATTAATCACCAGTCAAAACTTTTCACCAGCGTCAGCTCGCCAGCATTACGCATCGGTACAATAAA < 1:917219/100‑1 TGTTTTCTTGAACATCGACGGCGAAGGTAACCCCATTAATCACCAGTCAAAACTTTTCACCAGCGTCAGCTCGCCAGCATTACGCATCGGTACAATAAATGTTTCCTGTTTCTCATTGACCGATCCTTCATCGGTGATCAGCGTCAGT < 3:461120/148‑1 TGTTTTCTTGAACATCGACGGCGAAGGTAACCCCATTAATCACCAGTCAAAACTTTTCACCAGCGTC > 1:609759/1‑67 TGTTTTCTTGAACATCGACGGCGAAGGTAACCCCATTAATCACCAGTCAAAACTTTTCACAAGCGTC < 2:609759/67‑1 TTTCTTGAACATCGACGGCGAAGGTAACCCCATTAATCACCAGTCAAAACTTTTCACCAGCGTCAGCTCGCCAGCATTACGCATCGGTACAATAAATGTTTCCTGTTTCTCATTGACCGATCCTTCATCGGTGATCAGCGTCAGTTGG > 3:811273/1‑148 AACAGGAAACATTTATTGTACCGATGCGTAATGCTGGCGAGCTGACGCTGGTGAAAAGTTTTGACTGGTGATTAATGGGGTTACCTTCGCCGTCGATGTTCAAGAAAACACCCGATAACTTTCGCTATCGGGTGTTTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/2327437‑2327300‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tatcgggtgttttCTTGAACATCGACGGCGAAGGTAACCCCATTAATCACCAGTCAAAACTTTTCACCAGCGTCAGCTCGCCAGCATTACGCATCGGTACAATAAATGTTTCCTGTTTCTCATTGACCGATCCTTCATCGGTGATCAGCGTCAGTTGG > NC_000913/2327334‑2327478 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |