| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 2327300 = | 35 (0.370) | 10 (0.120) | 7/174 | NT | 28.0% | intergenic (+7/+67) | atoB/yfaP | acetyl‑CoA acetyltransferase/DUF2135 family protein, putative host defense protein |
| ? | NC_000913 | 2327334 = | 21 (0.260) | intergenic (+41/+33) | atoB/yfaP | acetyl‑CoA acetyltransferase/DUF2135 family protein, putative host defense protein | |||||
TAAAACGCTGGGGCTGGCAACACTGTGCATTGGCGGCGGTCAGGGAATTGCGATGGTGATTGAACGGTTGAATTAATCAATAAAAACACCCGATAGCGAAAGTTATCGGGTGTTTTCTTGAACATCGACGGCGAAGGTAACCCCATTAATCACCAGTCAAAACTTTTCACCAGCGTCAGCTCGCCAGCATTACGCATCGGTACAATAAATGTTTCCTGTTTCTCATTGACCGATCCTTCATCGGTGATCAGCGTCAGTTGGGCG > NC_000913/2327218‑2327481 | tAAAACGCTGGGGCTGGCAACACTGTGCATTGGCGGCGGTCAGGGAATTGCGATGGTGATTGAACGGTTGAATTAATCAATAAAAACACCCGATAGCGAAAGTTATCGGGTGTTTTc < 1:1035648/117‑1 (MQ=255)tAAAACGCTGGGGCTGGCAACACTGTGCATTGGCGGCGGTCAGGGAATTGCGATGGTGATTGAACGGTTGAATTAATCAATAAAAACACCCGATAGCGAAAGTTATCGGGTGTTTTc > 2:1035648/1‑117 (MQ=255) aaaaCGCTGGGGCTGGCAACACTGTGCATTGGCGGCGGTCAGGGAATTGCGATGGTGATTGAACGGTTGAATTAATCAATAAAAACACCCGATAGCGAAAGTTATCGGGTGTTTTCTTGAACATCGACGGCGa > 2:64997/1‑133 (MQ=255) aaaaCGCTGGGGCTGGCAACACTGTGCATTGGCGGCGGTCAGGGAATTGCGATGGTGATTGAACGGTTGAATTAATCAATAAAAACACCCGATAGCGAAAGTTATCGGGTGTTTTCTTGAACATCGACGGCGa < 1:64997/133‑1 (MQ=255) acacTGTGCATTGGCGGCGGTCAGGGAATTGCGATGGTGATTGAACGGTTGAATTAATCAATAAAAACACCCGATAGCGAAAGTTATCGGGTGTTTTCTTGAACATCGACGGCGAAGGTAACCCCATTAATCACCAGTCaaaa < 3:163949/143‑1 (MQ=255) acacTGTGCATTGGCGGCGGTCAGGGAATTGCGATGGTGATTGAACGGTTGAATTAATCAATAAAAACACCCGATAGCGAAAGTTATCGGGTGTTTTCTTGAACATCGACGGCGAAGGTAACCCCATTAATCACCAGTCaaaa > 4:163949/1‑143 (MQ=255) gTCAGGGAATTGCGATGGTGATTGAACGGTTGAATTAATCAATAAAAACACCCGATAGCGAAAGTTATCGGGTGTTTTCTTGAACATCGACGGCGAAGGTAAc > 2:181034/1‑103 (MQ=255) gTCAGGGAATTGCGATGGTGATTGAACGGTTGAATTAATCAATAAAAACACCCGATAGCGAAAGTTATCGGGTGTTTTCTTGAACATCGACGGCGAAGGTAAc < 1:181034/103‑1 (MQ=255) aTTGCGATGGTGATTGAACGGTTGAATTAATCAATAAAAACACCCGATAGCGAAAGTTATCGGGTGTTTTCTTGAACATCGACGGCGAAGGTAACCCCATTAATCACCAGTCAAAACttt > 2:54876/1‑120 (MQ=255) aTTGCGATGGTGATTGAACGGTTGAATTAATCAATAAAAACACCCGATAGCGAAAGTTATCGGGTGTTTTCTTGAACATCGACGGCGAAGGTAACCCCATTAATCACCAGTCAAAACttt < 1:54876/120‑1 (MQ=255) gATTGAACGGTTGAATTAATCAATAAAAACACCCGATAGCGAAAGTTATCGGGTGTTTTCTTGAACATCGACGGCGAAGGTAACCCCATTAATCACCAGTCAAAACtt > 3:796832/1‑108 (MQ=255) gATTGAACGGTTGAATTAATCAATAAAAACACCCGATAGCGAAAGTTATCGGGTGTTTTCTTGAACATCGACGGCGAAGGTAACCCCATTAATCACCAGTCAAAACtt < 4:796832/108‑1 (MQ=255) ttGAACGGTTGAATTAATCAATAAAAACACCCGATAGCGAAAGTTATCGGGTGTTTTCTTGAACATCGACGGCGAAGGTAACCCCATTAATCACCAGTCAAAACt < 3:460546/105‑1 (MQ=255) ttGAACGGTTGAATTAATCAATAAAAACACCCGATAGCGAAAGTTATCGGGTGTTTTCTTGAACATCGACGGCGAAGGTAACCCCATTAATCACCAGTCAAAACt > 4:460546/1‑105 (MQ=255) gTTGAATTAATCAATAAAAACACCCGATAGCGAAAGTTATCGGGTGTTTTCTTGAACATCGACGGCGAAGGTAACCCCATTAATCACCAGTCAAAACTTTTCACCAGCGTCAGCTCGCCAGCATTACGc > 1:708946/1‑129 (MQ=255) gTTGAATTAATCAATAAAAACACCCGATAGCGAAAGTTATCGGGTGTTTTCTTGAACATCGACGGCGAAGGTAACCCCATTAATCACCAGTCAAAACTTTTCACCAGCGTCAGCTCGCCAGCATTACGc < 2:708946/129‑1 (MQ=255) ttGAATTAATCAATAAAAACACCCGATAGCGAAAGTTATCGGGTGTTTTCTTGAACATCGACGGCGa < 1:156266/67‑1 (MQ=255) ttGAATTAATCAATAAAAACACCCGATAGCGAAAGTTATCGGGTGTTTTCTTGAACATCGACGGCGa > 2:156266/1‑67 (MQ=255) cAATAAAAACACCCGATAGCGAAAGTTATCGGGTGTTTTCTTGAACATCGACGGCGAAg < 3:360827/59‑1 (MQ=255) cAATAAAAACACCCGATAGCGAAAGTTATCGGGTGTTTTCTTGAACATCGACGGCGAAg > 4:360827/1‑59 (MQ=255) aaaaaCACCCGATAGCGAAAGTTATCGGGTGTTTTCTTGAACATCGACGGCGAAGGTAACCCCATTAAt > 4:226788/1‑69 (MQ=255) aaaaaCACCCGATAGCGAAAGTTATCGGGTGTTTTCTTGAACATCGACGGCGAAGGTAACCCCATTAAt < 3:226788/69‑1 (MQ=255) AAAACACCCGATAGCGAAAGTTATCGGGTGTTTTCTTGAACATCGACGGCGAAGGTAACCCCATTAATCACCAGTCAAAACTTTTCACCAg < 2:777834‑M1/91‑1 (MQ=255) AAAACACCCGATAGCGAAAGTTATCGGGTGTTTTCTTGAACATCGACGGCGAAGGTAACCCCATTAATCACCAGTCAAAACTTTTCACCAg > 1:1118948‑M1/1‑91 (MQ=255) AAAACACCCGATAGCGAAAGTTATCGGGTGTTTTCTTGAACATCGACGGCGAAGGTAACCCCATTAATCACCAGTCAAAACTTTTCACCAg < 2:1118948‑M1/91‑1 (MQ=255) AAAACACCCGATAGCGAAAGTTATCGGGTGTTTTCTTGAACATCGACGGCGAAGGTAACCCCATTAATCACCAGTCAAAACTTTTCACCAg > 1:777834‑M1/1‑91 (MQ=255) AACACCCGATAGCGAAAGTTATCGGGTGTTTTCTTGAACATCGACGGCGAAGGTAACCCCATTAATCACCAGTCAAAACt > 2:370765‑M1/1‑80 (MQ=255) AACACCCGATAGCGAAAGTTATCGGGTGTTTTCTTGAACATCGACGGCGAAGGTAACCCCATTAATCACCAGTCAAAACt < 1:370765‑M1/80‑1 (MQ=255) AACACCCGATAGCGAAAGTTATCGGGTGTTTTCTTGAACATCGACGGCGAAGGTAACCCCATTAATCACCAGTCAAAACTTTTCACCAGCGTCAGCTCGCCAGCATTACGCATCGGt > 2:459263‑M1/1‑117 (MQ=255) AACACCCGATAGCGAAAGTTATCGGGTGTTTTCTTGAACATCGACGGCGAAGGTAACCCCATTAATCACCAGTCAAAACTTTTCACCAGCGTCAGCTCGCCAGCATTACGCATCGGt < 1:459263‑M1/117‑1 (MQ=255) ACCCGATAGCGAAAGTTATCGGGTGTTTTCTTGAACATCGACGGCGAAGGTAACCCCATTAATCACCAg > 3:1040668‑M1/1‑69 (MQ=255) ACCCGATAGCGAAAGTTATCGGGTGTTTTCTTGAACATCGACGGCGAAGGTAACCCCATTAATCACCAg < 4:1040668‑M1/69‑1 (MQ=255) cccgataactttcgctatcgggtgttttCTTGAACATCGACGGCGAAGGTa > 4:426238‑M2/29‑51 (MQ=255) cccgataactttcgctatcgggtgttttCTTGAACATCGACGGCGAAGGTa < 3:426238‑M2/23‑1 (MQ=255) cccgataactttcgctatcgggtgttttCTTGAACATCGACGGCGAAGGTAACCCCATTAATCACCAGTCaaa < 2:347618‑M2/45‑1 (MQ=255) cccgataactttcgctatcgggtgttttCTTGAACATCGACGGCGAAGGTAACCCCATTAATCACCAGTCaaa > 1:347618‑M2/29‑73 (MQ=255) cgataactttcgctatcgggtgttttCTTGAACATCGACGGCGAAGGTAACCCCATTAATCACCAGTCAAAACTTTTCACCAGCGTCAGCTCGCCAGCATTACGCATCGGTACAATAAATGTTTc < 4:812623‑M2/99‑1 (MQ=255) cgataactttcgctatcgggtgttttCTTGAACATCGACGGCGAAGGTAACCCCATTAATCACCAGTCAAAACTTTTCACCAGCGTCAGCTCGCCAGCATTACGCATCGGTACAATAAATGTTTc > 3:812623‑M2/27‑125 (MQ=255) CGATAGCGAAAGTTATCGGGTGTTTTCTTGAACATCGACGGCGAAGGTAACCCCATTAATCACCAGTCAAAACTTTTCACCAGCGTCAGCTCGCCAGCATTACGCATCGGTACAATAAATg > 4:772195‑M1/1‑121 (MQ=255) CGATAGCGAAAGTTATCGGGTGTTTTCTTGAACATCGACGGCGAAGGTAACCCCATTAATCACCAGTCAAAACTTTTCACCAGCGTCAGCTCGCCAGCATTACGCATCGGTACAATAAATg < 3:772195‑M1/121‑1 (MQ=255) CGATAGCGAAAGTTATCGGGTGTTTTCTTGAACATCGACGGCGAAGGTAACCCCATTAATCACCAGTCAAAACTTTTCACCAGCGTCAGCTCGCCAGCATTACGCATCGGTACAATAAATGTTTCCTg > 4:1123529‑M1/1‑128 (MQ=255) CGATAGCGAAAGTTATCGGGTGTTTTCTTGAACATCGACGGCGAAGGTAACCCCATTAATCACCAGTCAAAACTTTTCACCAGCGTCAGCTCGCCAGCATTACGCATCGGTACAATAAATGTTTCCTg < 3:1123529‑M1/128‑1 (MQ=255) GATAGCGAAAGTTATCGGGTGTTTTCTTGAACATCGACGGCGAAGGTAACCCCATTAATCACCAGTCAAAACTTTTCACCAGCGTCAGCTCGCCAGCATTACGCATCGGTACAATAAATGTTTCCTGtt > 4:411662‑M1/1‑129 (MQ=255) GATAGCGAAAGTTATCGGGTGTTTTCTTGAACATCGACGGCGAAGGTAACCCCATTAATCACCAGTCAAAACTTTTCACCAGCGTCAGCTCGCCAGCATTACGCATCGGTACAATAAATGTTTCCTGtt < 3:411662‑M1/129‑1 (MQ=255) tttcgctatcgggtgttttCTTGAACATCGACGGCGAAGGTAACCCCAt > 4:1071677‑M2/20‑49 (MQ=255) tttcgctatcgggtgttttCTTGAACATCGACGGCGAAGGTAACCCCAt < 3:1071677‑M2/30‑1 (MQ=255) tttcgctatcgggtgttttCTTGAACATCGACGGCGAAGGTAACCCCAt > 2:151842‑M2/20‑49 (MQ=255) tttcgctatcgggtgttttCTTGAACATCGACGGCGAAGGTAACCCCAt < 1:151842‑M2/30‑1 (MQ=255) gAAAGTTATCGGGTGTTTTCTTGAACATCGACGGCGAAGGTAACCCCATTAATCACCAGTCAAAACTTTTCACCAGCGTCAGCTCGCCAGCATTACGCATCGGTACAATAAATGTTTCCTGTTTCTCATTGACCGATCCTTCATCGGt > 4:461120/1‑148 (MQ=255) aaaGTTATCGGGTGTTTTCTTGAACATCGACGGCGAAGGTAACCCCATTAATCACCAGTCAAAACTTTTCACCAGCGTCAGCTCGCCAGCATTACGCATCGGTACa < 1:114736/106‑1 (MQ=255) aaaGTTATCGGGTGTTTTCTTGAACATCGACGGCGAAGGTAACCCCATTAATCACCAGTCAAAACTTTTCACCAGCGTCAGCTCGCCAGCATTACGCATCGGTACa > 2:114736/1‑106 (MQ=255) gtgttttCTTGAACATCGACGGCGAAGGTAACCCCATTAATCACCAGTCAAAACTTTTCACCAGCGTCAGCTCGCCAGCATTACGCATCGGTACAATaaa < 1:917219‑M2/93‑1 (MQ=255) gtgttttCTTGAACATCGACGGCGAAGGTAACCCCATTAATCACCAGTCAAAACTTTTCACCAGCGTCAGCTCGCCAGCATTACGCATCGGTACAATaaa > 2:917219‑M2/8‑100 (MQ=255) tgttttCTTGAACATCGACGGCGAAGGTAACCCCATTAATCACCAGTCAAAACTTTTCACCAGCGTc > 1:609759‑M2/7‑67 (MQ=255) tgttttCTTGAACATCGACGGCGAAGGTAACCCCATTAATCACCAGTCAAAACTTTTCACCAGCGTCAGCTCGCCAGCATTACGCATCGGTACAATAAATGTTTCCTGTTTCTCATTGACCGATCCTTCATCGGTGATCAGCGTCAGt < 3:461120‑M2/142‑1 (MQ=255) tgttttCTTGAACATCGACGGCGAAGGTAACCCCATTAATCACCAGTCAAAACTTTTCACAAGCGTc < 2:609759‑M2/61‑1 (MQ=255) tttCTTGAACATCGACGGCGAAGGTAACCCCATTAATCACCAGTCAAAACTTTTCACCAGCGTCAGCTCGCCAGCATTACGCATCGGTACAATAAATGTTTCCTGTTTCTCATTGACCGATCCTTCATCGGTGATCAGCGTCAGTTgg > 3:811273‑M2/4‑148 (MQ=255) cTTGAACATCGACGGCGAAGGTAACCCCATTAATCACCAGTCAAAACTTTTCACCAGCGTCAGCTCGCCAGCATTACGCATCGGTACAATAAATGTTTCCTGTTTCTCATTGACCGATCCTTCATCGGTGATCAGCGTCAGTTGGGCg > 1:817132/1‑148 (MQ=255) | TAAAACGCTGGGGCTGGCAACACTGTGCATTGGCGGCGGTCAGGGAATTGCGATGGTGATTGAACGGTTGAATTAATCAATAAAAACACCCGATAGCGAAAGTTATCGGGTGTTTTCTTGAACATCGACGGCGAAGGTAACCCCATTAATCACCAGTCAAAACTTTTCACCAGCGTCAGCTCGCCAGCATTACGCATCGGTACAATAAATGTTTCCTGTTTCTCATTGACCGATCCTTCATCGGTGATCAGCGTCAGTTGGGCG > NC_000913/2327218‑2327481 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |