New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	2642131 =	46 (0.490)	6 (0.070)	6/186	NT	14.2%	coding (714/1014 nt)	rodZ	MreB assembly cytoskeletal protein
	?	NC_000913	2642169 =	30 (0.350)					coding (676/1014 nt)	rodZ	MreB assembly cytoskeletal protein

CGCAACCAACACGCAAACACCTGCCGTAACTGCGCCAGCACCAGCTGTTGATCCGCAACAGAATGCGGTTGTTTCGCCTTCGCAGGCAAATGTTGATACCGCCGCGACCCCGGCACCAACGGCAGCAACAACGCCAGATGGTGCTGCGCCGTTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/2642284‑2642131 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccgttgGTGCCGGGGTCGCGGCGGTATCAACATTTGCCTGCGAAGGCGAAACAACCGCATTCTGTTGCGGATCAACAGCTGGTGCTGGCGCAGTTACGGCAGGTGTTTGCGTGTTGGTTGCGGTAGTATCCACAGACGCTGGCGGCGTGGA  >  NC_000913/2642169‑2642313                                                                                                                                                                                                                                                                                                             CGCAACCAACACGCAAACACCTGCCGTAACTGCGCCAGCACCAGCTGTTGATCCGCAACAGAATGCGGTTGTTTCGCCTTCGCAGGCAAATGTTGATACCGCCGCGACCCCGGCACCAACGGCAGCAACAACGCCAGATGGTGCTGCG                                                                                                                                                         >  1:843108/1‑148     ACCAACACGCAAACACCTGCCGTAACTGCGCCAGCACCAGCTGTTGATCCGCAACAGAATGCGGTTGTTTCGCCTTCGCAGGCAAATGTTGATACCGCCGCGACCCCGGCACCAACGGCAGCAACAACGCCAGATGGTGCTGCGCCGT                                                                                                                                                     <  2:843108/148‑1     ACCAACACGCAAACACCTGCCGTAACTGCGCCAGCACCAGCTGTTGATCCGCAACAGAATGCGGTTGTTTCGCCTTCGCAGGCAAATGTTGATACCGCCGCGACCCCGGCACCAACGGCAGCAACAACGCCAGATGGTGCTGCGCCGT                                                                                                                                                     <  2:880509/148‑1        AACACGCAAACACCTGCCGTAACTGCGCCAGCACCAGCTGTTGATCCGCAACAGAATGCGGTTGTTTCGCCTTCGCAGGCAAATGTTGATACCGCCGCGACCCCGGCACCAACGGCAGCAACAACGCCAGATGGTGCTGCGCCGT                                                                                                                                                     >  1:1097509/1‑145        AACACGCAAACACCTGCCGTAACTGCGCCAGCACCAGCTGTTGATCCGCAACAGAATGCGGTTGTTTCGCCTTCGCAGGCAAATGTTGATACCGCCGCGACCCCGGCACCAACGGCAGCAACAACGCCAGATGGTGCTGCGCCGT                                                                                                                                                     <  2:1097509/145‑1                                                              AATGCGGTTGTTTCGCCTTCGCAGGCAAATGTTGATACCGCCGCGACCCCGGCACCAACGGCAGCAACAACGCCAGATGGTGCTGCGCCGTT                                                                                                                                                    <  1:666335/92‑1                                                              AATGCGGTTGTTTCGCCTTCGCAGGCAAATGTTGATACCGCCGCGACCCCGGCACCAACGGCAGCAACAACGCCAGATGGTGCTGCGCCGTT                                                                                                                                                    >  2:666335/1‑92                                                                                                                     CAACGGCAGCAACAACGCCAGATGGTGCTGCGCCGTTGGTGCCGGGGTCGCGGCGGTATCAACATTTGCCTGCGAAGGCGAAACAACCGCATTCTGTTGCGGA                                                                                  <  1:282097/103‑1                                                                                                                     CAACGGCAGCAACAACGCCAGATGGTGCTGCGCCGTTGGTGCCGGGGTCGCGGCGGTATCAACATTTGCCTGCGAAGGCGAAACAACCGCATTCTGTTGCGGA                                                                                  >  2:282097/1‑103                                                                                                                      AACGGCAGCAACAACGCCAGATGGTGCTGCGCCGTTGGTGCCGGGGTCGCGGCGGTATCAACATTTGCCTGCGAAGGCGAAACAACCGCATTCTGTTGCGGATCAATAGCTGGTGCTGGCGCAGTTACGGCAGGTGTTTGCGTGTTGG                                    >  4:684360/1‑148                                                                                                                           ctGCAACAACGCCAGATGGTGCTGCGCCGTTGGTGCCGGGGTCGCGGCGGTATCAACATTTGCCTGCGAAGGCGAAACAACCGCATTCTGTTGCGGATCAACAGCTGGTGCTGGCGCAGTTACGGCAGGTGTTTGCGTGTTGGTTGCG                               <  3:684360/146‑1                                                                                                                             GCAACAACGCCAGATGGTGCT‑‑GCCGTTGGTGCCGGGGTCGCGGCGGTATCAACATTTGCCTGCGAAGGCGAAACAACCGCATTCTGTTGCGGATCAACAGCTGGTGCTGGCGCAGTTACGGCAGGTGTTTGCGTGT                                       >  1:308396/1‑136                                                                                                                             GCAACAACGCCAGATGGTGCT‑‑GCCGTTGGTGCCGGGGTCGCGGCGGTATCAACATTTGCCTGCGAAGGCGAAACAACCGCATTCTGTTGCGGATCAACAGCTGGTGCTGGCGCAGTTACGGCAGGTGTTTGCGTGT                                       <  2:308396/136‑1                                                                                                                                                        TTGGTGCCGGGGTCGCGGCGGTATCAACATTTGCCTGCGAAGGCGAAACAACCGCATTCTGTTGCGGATCAACAGCTGGTGCTGGCGCAGTTACGGCAGGTGTTTGCGTGTTGGTTGCGGTAGTATCCACAGACGCTGGCGGCGTGGA  <  2:414618/148‑1                                                                                                                                                                                                                                                                                                             CGCAACCAACACGCAAACACCTGCCGTAACTGCGCCAGCACCAGCTGTTGATCCGCAACAGAATGCGGTTGTTTCGCCTTCGCAGGCAAATGTTGATACCGCCGCGACCCCGGCACCAACGGCAGCAACAACGCCAGATGGTGCTGCGCCGTTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/2642284‑2642131 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccgttgGTGCCGGGGTCGCGGCGGTATCAACATTTGCCTGCGAAGGCGAAACAACCGCATTCTGTTGCGGATCAACAGCTGGTGCTGGCGCAGTTACGGCAGGTGTTTGCGTGTTGGTTGCGGTAGTATCCACAGACGCTGGCGGCGTGGA  >  NC_000913/2642169‑2642313

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.