| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 2642131 = | 46 (0.490) | 6 (0.070) | 6/186 | NT | 14.2% | coding (714/1014 nt) | rodZ | MreB assembly cytoskeletal protein |
| ? | NC_000913 | 2642169 = | 30 (0.350) | coding (676/1014 nt) | rodZ | MreB assembly cytoskeletal protein | |||||
TCAAATTACCGTCTTTACGCTGCATACCGCTAAACAATTTTTTACCGGTAGCATCAGTGACCTCCAGCCAGCAATCGGCAGTAAAGTTCATCACCAGCGCATTCGGATCAGCCACCGGCGTGGTCACGCCAGCCTGATCGGTTGGCAACGGCGCAGCACCATCTGGCGTTGTTGCTGCCGTTGGTGCCGGGGTCGCGGCGGTATCAACATTTGCCTGCGAAGGCGAAACAACCGCATTCTGTTGCGGATCAACAGCTGGTGCTGGCGCAGTTACGGCAGGTGTTTGCG > NC_000913/2641986‑2642273 | tccacgccgccagcgtctgtggatactaccgcaaccaacacgcaaacacctgccgtaactgcgccagcaccagctgttgatccgcaacagaatgcggttgtttcgccttcgcaggcaaatgttgataccgccgcgaccccggcacCaa < 2:414618‑M1/3‑1 (MQ=255) cGCTGCATACCGCTAAACAATTTTTTACCGGTAGCATCAGTGACCTCCAGCCAGCAATCGGCAGTAAAGTTCATCACCAGCGCATTCGGATCAGCCACCGGCGTGGTCACGCCAGCCTGATCGGTTGGCAACGGCGCAGCACCATCTg < 2:1129429/148‑1 (MQ=255) cgcaaccaacacgcaaacacctgccgtaactgcgccagcaccagctgttgatccgcaacagaatgcggttgtttcgccttcgcaggcaaatgttgataccgccgcgaccccggcacCAACGGCGCAGCACCATCTGGCGTTgttgcag < 3:684360‑M1/32‑3 (MQ=255) aCAATTTTTTACCGGTAGCATCAGTGACCTCCAGCCAGCAATCGGCAGTAAAGTTCATCACCAGCGCATTCGGATCAGCCACCGGCGTGGTCACGCCAGCCTGATCGGTTGGCAACGGCGCAGCACCATCTGGCGTTGTTGCTGCCGt > 3:321843/1‑148 (MQ=255) ccaacacgcaaacacctgccgtaactgcgccagcaccagctattgatccgcaacagaatgcggttgtttcgccttcgcaggcaaatgttgataccgccgcgaccccggcacCAACGGCGCAGCACCATCTGGCGTTGTTGCTGCCGtt > 4:684360‑M1/112‑148 (MQ=255) aTTTTTTACCGGTAGCATCAGTGACCTCCAGCCAGCAATCGGCAGTAAAGTTCATCACCAGCGCATTCGGATCAGCCACCGGCGTGGTCACGCCAGCCTGATCGGTTGGCAACGGCGCAGCACCATCTGGCGTTGTTGCTGCCGt > 4:998443/1‑145 (MQ=255) aTTTTTTACCGGTAGCATCAGTGACCTCCAGCCAGCAATCGGCAGTAAAGTTCATCACCAGCGCATTCGGATCAGCCACCGGCGTGGTCACGCCAGCCTGATCGGTTGGCAACGGCGCAGCACCATCTGGCGTTGTTGCTGCCGt < 3:998443/145‑1 (MQ=255) ttttttACCGGTAGCATCAGTGACCTCCAGCCAGCAATCGGCAGTAAAGTTCATCACCAGCGCATTCGGATCAGCCACCGGCGTGGTCACGCCAGCCTGATCGGTTGGCAACGGCGCAGCACCATCTGGCGTTGTTGCTGcc > 2:763428/1‑142 (MQ=255) ttttttACCGGTAGCATCAGTGACCTCCAGCCAGCAATCGGCAGTAAAGTTCATCACCAGCGCATTCGGATCAGCCACCGGCGTGGTCACGCCAGCCTGATCGGTTGGCAACGGCGCAGCACCATCTGGCGTTGTTGCTGcc < 1:763428/142‑1 (MQ=255) acacgcaaacacctgccgtaactgcgccagcaccagctgttgatccgcaacagaatgcggttgtttcgccttcgcaggcaaatgttgataccgccgcgaccccggcacCAACGGC‑‑AGCACCATCTGGCGTTGTtgc > 1:308396‑M1/109‑136 (MQ=255) acacgcaaacacctgccgtaactgcgccagcaccagctgttgatccgcaacagaatgcggttgtttcgccttcgcaggcaaatgttgataccgccgcgaccccggcacCAACGGC‑‑AGCACCATCTGGCGTTGTtgc < 2:308396‑M1/28‑1 (MQ=255) gTAGCATCAGTGACCTCCAGCCAGCAATCGGCAGTAAAGTTCATCACCAGCGCATTCGGATCAGCCACCGGCGTGGTCACGCCAGCCTGATCGGTTGGCAACGGCGCAGCACCATCTGGCgt < 1:243840/122‑1 (MQ=255) gTAGCATCAGTGACCTCCAGCCAGCAATCGGCAGTAAAGTTCATCACCAGCGCATTCGGATCAGCCACCGGCGTGGTCACGCCAGCCTGATCGGTTGGCAACGGCGCAGCACCATCTGGCgt > 2:243840/1‑122 (MQ=255) tAGCATCAGTGACCTCCAGCCAGCAATCGGCAGTAAAGTTCATCACCAGCGCATTCGGATCAGCCACCGGCGTGGTCACGCCAGCCTGATCGGTTGGCAACGgcgc > 1:430614/1‑106 (MQ=255) tAGCATCAGTGACCTCCAGCCAGCAATCGGCAGTAAAGTTCATCACCAGCGCATTCGGATCAGCCACCGGCGTGGTCACGCCAGCCTGATCGGTTGGCAACGGCGCAGCACCATCTGGCgttg < 1:107689/123‑1 (MQ=255) tAGCATCAGTGACCTCCAGCCAGCAATCGGCAGTAAAGTTCATCACCAGCGCATTCGGATCAGCCACCGGCGTGGTCACGCCAGCCTGATCGGTTGGCAACGGCGCAGCACCATCTGGCgttg > 2:107689/1‑123 (MQ=255) tAGCATCAGTGACCTCCAGCCAGCAATCGGCAGTAAAGTTCATCACCAGCGCATTCGGATCAGCCACCGGCGTGGTCACGCCAGCCTGATCGGTTGGCAACGGCGCAGCACCATCTGGCGttgttg > 1:887888/1‑126 (MQ=255) tAGCATCAGTGACCTCCAGCCAGCAATCGGCAGTAAAGTTCATCACCAGCGCATTCGGATCAGCCACCGGCGTGGTCACGCCAGCCTGATCGGTTGGCAACGGCGCAGCACCATCTGGCGttgttg < 2:887888/126‑1 (MQ=255) tAGCATCAGTGACCTCCAGCCAGCAATCGGCAGTAAAGTTCATCACCAGCGCATTCGGATCAGCCACCGGCGTGGTCACGCCAGCCTGATCGGTTGGCAACGGCGCAGCACCATCTGGCGTTGTTGCTGCCGTTGGTGCCGGGGTcgc > 3:786137/1‑148 (MQ=255) tAGCATCAGTGACCTCCAGCCAGCAATCGGCAGTAAAGTTCATCACCAGCGCATTCGGATCAGCCACCGGCGTGGTCACGACAGCCTGATCGGTTGGCAACGgcgc < 2:430614/106‑1 (MQ=255) cATCAGTGACCTCCAGCCAGCAATCGGCAGTAAAGTTCATCACCAGCGCATTCGGATCAGCCACCGGCGTGGTCACGCCAGCCTGATCGGTTGGCAACGGCGCAGCACCATCTGGCGTTGTTGCTGCCGTTGGTGCCgg < 2:577294/139‑1 (MQ=255) cATCAGTGACCTCCAGCCAGCAATCGGCAGTAAAGTTCATCACCAGCGCATTCGGATCAGCCACCGGCGTGGTCACGCCAGCCTGATCGGTTGGCAACGGCGCAGCACCATCTGGCGTTGTTGCTGCCGTTGGTGCCgg > 1:577294/1‑139 (MQ=255) cAGTGACCTCCAGCCAGCAATCGGCAGTAAAGTTCATCACCAGCGCATTCGGATCAGCCACCGGCGTGGTCACGCCAGCCTGATCGGTTGGCAACGGCgca < 4:111931/101‑1 (MQ=255) cAGTGACCTCCAGCCAGCAATCGGCAGTAAAGTTCATCACCAGCGCATTCGGATCAGCCACCGGCGTGGTCACGCCAGCCTGATCGGTTGGCAACGGCgca > 3:111931/1‑101 (MQ=255) ccagccagCAATCGGCAGTAAAGTTCATCACCAGCGCATTCGGATCAGCCACCGGCGTGGTCACGCCAGCCTGATCGGTTGGCAACGGCGCAGCACCATCTGGCGTTGTTGCTGCCGTTGGTGCCGGGGTCGCGGCGGTATCa > 3:991712/1‑143 (MQ=255) ccagccagCAATCGGCAGTAAAGTTCATCACCAGCGCATTCGGATCAGCCACCGGCGTGGTCACGCCAGCCTGATCGGTTGGCAACGGCGCAGCACCATCTGGCGTTGTTGCTGCCGTTGGTGCCGGGGTCGCGGCGGTATCa < 4:991712/143‑1 (MQ=255) gcAATCGGCAGTAAAGTTCATCACCAGCGCATTCGGATCAGCCACCGGCGTGGTCACGCCAGCCTGATCGGTTGGCAACGGCGCAGCACCATCTGGCgtt < 4:733721/100‑1 (MQ=255) gcAATCGGCAGTAAAGTTCATCACCAGCGCATTCGGATCAGCCACCGGCGTGGTCACGCCAGCCTGATCGGTTGGCAACGGCGCAGCACCATCTGGCgtt > 3:733721/1‑100 (MQ=255) aTCGGCAGTAAAGTTCATCACCAGCGCATTCGGATCAGCCACCGGCGTGGTCACGCCAGCCTGATCGGTTGGCAACGGCGCAGCACCATCTGGCGTTGTTGCTGCCGTTGGTGCCGGGGTCGCGGCGGTATCAACATTTGCCTGCGaa < 4:321843/148‑1 (MQ=255) cAGTAAAGTTCATCACCAGCGCATTCGGATCAGCCACCGGCGTGGTCACGCCAGCCTGATCGGTTGGCAACGGCGCAGCACCATCTGGCGTTGTTGCTGCCGTTGGTGCCGGGGTCGCGGCGGTATCAACa > 3:743088/1‑131 (MQ=255) cAGTAAAGTTCATCACCAGCGCATTCGGATCAGCCACCGGCGTGGTCACGCCAGCCTGATCGGTTGGCAACGGCGCAGCACCATCTGGCGTTGTTGCTGCCGTTGGTGCCGGGGTCGCGGCGGTATCAACa < 4:743088/131‑1 (MQ=255) tccgcaacagaatgcggttgtttcgccttcgcaggcaaatgttgataccgccgcgaccccggcacCAACGGCGCAGCACCATCTGGCGTTGTTGCTGCCGTTg < 1:282097‑M1/38‑1 (MQ=255) tccgcaacagaatgcggttgtttcgccttcgcaggcaaatgttgataccgccgcgaccccggcacCAACGGCGCAGCACCATCTGGCGTTGTTGCTGCCGTTg > 2:282097‑M1/66‑103 (MQ=255) aaaGTTCATCACCAGCGCATTCGGATCAGCCACCGGCGTGGTCACGCCAGCCTGATCGGTTGGCAACGGCGCAGCACCATCTGGCgt < 3:1124677/87‑1 (MQ=255) aaaGTTCATCACCAGCGCATTCGGATCAGCCACCGGCGTGGTCACGCCAGCCTGATCGGTTGGCAACGGCGCAGCACCATCTGGCgt > 4:1124677/1‑87 (MQ=255) aaaGTTCATCACCAGCGCATTCGGATCAGCCACCGGCGTGGTCACGCCAGCCTGATCGGTTGGCAACGGCGCAGCACCATCTGGCGTTGTTGCTGCCGTTgg > 3:255329/1‑102 (MQ=255) aaaGTTCATCACCAGCGCATTCGGATCAGCCACCGGCGTGGTCACGCCAGCCTGATCGGTTGGCAACGGCGCAGCACCATCTGGCGTTGTTGCTGCCGTTgg < 4:255329/102‑1 (MQ=255) tcatcaCCAGCGCATTCGGATCAGCCACCGGCGTGGTCACGCCAGCCTGATCGGTTGGCAACGGCGTAGCACCATCTGGCGTTGTTGCTGCCGtt < 3:930678/95‑1 (MQ=255) tcatcaCCAGCGCATTCGGATCAGCCACCGGCGTGGTCACGCCAGCCTGATCGGTTGGCAACGGCGCAGCACCATCTGGCGTTGTTGCTGCCGtt > 4:930678/1‑95 (MQ=255) atcaCCAGCGCATTCGGATCAGCCACCGGCGTGGTCACGCCAGCCTGATCGGTTGGCAACGGCGCAGCACCATCTGGCGTTGTTGCTGCCGTTGGTGCCGGGGTCGCGGCGGTATCAACATTTGCCTGCGAAGGCGAAACAACCGCAt > 3:26811/1‑148 (MQ=255) tcaCCAGCGCATTCGGATCAGCCACCGGCGTGGTCACGCCAGCCTGATCGGTTGGCAACGGCGCAGCACCATCTGGCGTTGTTGCTGCCGTTGGTGCCg > 1:1105200/1‑99 (MQ=255) tcaCCAGCGCATTCGGATCAGCCACCGGCGTGGTCACGCCAGCCTGATCGGTTGGCAACGGCGCAGCACCATCTGGCGTTGTTGCTGCCGTTGGTGCCg < 2:1105200/99‑1 (MQ=255) aGCGCATTCGGATCAGCCACCGGCGTGGTCACGCCAGCCTGATCGGTTGGCAACGGCGCAGCACCATCTGGCGTTGTTGCTGCCg > 1:741104/1‑85 (MQ=255) aGCGCATTCGGATCAGCCACCGGCGTGGTCACGCCAGCCTGATCGGTTGGCAACGGCGCAGCACCATCTGGCGTTGTTGCTGCCg < 2:741104/85‑1 (MQ=255) cATTCGGATCAGCCACCGGCGTGGTCACGCCAGCCTGATCGGTTGGCAACGGCGCAGCACCATCTGGCGTTGTTGCTGCCGTTGGTGCCGGGGTCGCGGCGGTATCAACATTTGCCTGCGAAGGCGAAACAACCGCATTCTGTTGCgg < 4:786137/148‑1 (MQ=255) ttCGGATCAGCCACCGGCGTGGTCACGCCAGCCTGATCGGTTGGCAACGGCGCAGCACCATCTGGCGTTGTTGCTGCCGTTGGTGCCGGGGTCGCGGCGGTATCAACATTTGCCTGCGAAGGCGAAACAAcc > 1:1015900/1‑132 (MQ=255) ttCGGATCAGCCACCGGCGTGGTCACGCCAGCCTGATCGGTTGGCAACGGCGCAGCACCATCTGGCGTTGTTGCTGCCGTTGGTGCCGGGGTCGCGGCGGTATCAACATTTGCCTGCAAAGGCGAAACAAcc < 2:1015900/132‑1 (MQ=255) aTCAGCCACCGGCGTGGTCACGCCAGCCTGATCGGTTGGCAACGGCgcagccc < 2:209855/53‑3 (MQ=255) aTCAGCCACCGGCGTGGTCACGCCAGCCTGATCGGTTGGCAACGGCGCAGCAc > 1:209855/1‑53 (MQ=255) cAGCCACCGGCGTGGTCACGCCAGCCTGATCGGTTGGCAACGGCGCAGCACCATCTGGCgttgtt < 3:809924/65‑1 (MQ=255) cAGCCACCGGCGTGGTCACGCCAGCCTGATCGGTTGGCAACGGCGCAGCACCATCTGGCgttgtt > 4:809924/1‑65 (MQ=255) ccAGCCTGATCGGTTGGCAACGGCGCAGCACCATCTGGCGTTGTTGCTGCCGTTGGTGCCGGGGTCGCGGCGGTATCAACATTTGCCTGCGAAGGCGAAACAACCGc > 4:335946/1‑107 (MQ=255) ccAGCCTGATCGGTTGGCAACGGCGCAGCACCATCTGGCGTTGTTGCTGCCGTTGGTGCCGGGGTCGCGGCGGTATCAACATTTGCCTGCGAAGGCGAAACAACCGc < 3:335946/107‑1 (MQ=255) gTTGGCGACGGCGCAGCACCATCTGGCGTTGTTGCTGCCGTTGGTGCCGGGGTCGCGGCGGTATCAACATTTGCCTGCGAAGGCGAAACAACCGCATTCTGTTGCGGATCAACAGCTGGTGCTGGCGCAGTTACGGCAGGTGTTTGCg > 2:618211/1‑148 (MQ=255) | TCAAATTACCGTCTTTACGCTGCATACCGCTAAACAATTTTTTACCGGTAGCATCAGTGACCTCCAGCCAGCAATCGGCAGTAAAGTTCATCACCAGCGCATTCGGATCAGCCACCGGCGTGGTCACGCCAGCCTGATCGGTTGGCAACGGCGCAGCACCATCTGGCGTTGTTGCTGCCGTTGGTGCCGGGGTCGCGGCGGTATCAACATTTGCCTGCGAAGGCGAAACAACCGCATTCTGTTGCGGATCAACAGCTGGTGCTGGCGCAGTTACGGCAGGTGTTTGCG > NC_000913/2641986‑2642273 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |