New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	3738815 =	213 (2.280)	25 (0.290)	16/184	NT	11.9%	coding (1319/2031 nt)	malS	alpha‑amylase
	?	NC_000913	3738835 =	174 (2.030)					coding (1339/2031 nt)	malS	alpha‑amylase

TCGGGGTTAGCTTTTTTCCATTCGCGAAGCGCGGCGCTGGCTTCGGTTTTCAGTTGCTGCCAGGCGGGCAACTCAACATGTTTGGCGGTATCGACCCGAAAACCATCAATCCCATAGTCGCGGACCCACTGACTTAACCAGTGGGTTAAGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/3738965‑3738815 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggttaagtCAGTGGGTCCGCGACTATGGGATTGATGGTTTTCGGGTCGATACCGCCAAACATGTTGAGTTGCCCGCCTGGCAGCAACTGAAAACCGAAGCCAGCGCCGCGCTTCGCGAATGGAAAAAAGCTAACCCCGACAAAGCATTAGATGAC  >  NC_000913/3738835‑3738981                                                                                                                                                                                                                                                                                                            TCGGGGTTAGCTTTTTTCCATTCGCGAAGCGCGGCGCTGGCTTCGGTTTTCAGTTGCTGCCAGGCGGGCAACTCAACATGTTTGGCGGTATCGACCCGAAAACCATCAATCCCATAGTCGCGGACCCACTGACTTAACCAGTGGGTTA                                                                                                                                                        <  4:713511/148‑1 TCGGGGTTAGCTTTATTCCATTCGCGAAGCGCGGCGCTGGCTTCGGTTTTCAGTTGCTGCCAGGCGGGCAACTCAACATGTTTGGCGGTATCGACCCGAAAACCATCAATCCCATAGTCGCGGACCCACTGACTTAACCAGTGGGTTA                                                                                                                                                        <  4:234623/148‑1            TTTTTTCCATTCGCGAAGCGCGGCGCTGGCTTCGGTTTTCAGTTGCTGCCAGGCGGGCAACTCAACATGTTTGGCGGTATCGACCCGAAAACCATCAATCCCATAGTCGCGGACCCACTGACTTAACCAGTGG                                                                                                                                                            >  2:953269/1‑133            TTTTTTCCATTCGCGAAGCGCGGCGCTGGCTTCGGTTTTCAGTTGCTGCCAGGCGGGCAACTCAACATGTTTGGCGGTATCGACCCGAAAACCATCAATCCCATAGTCGCGGACCCACTGACTTAACCAGTGG                                                                                                                                                            <  1:953269/133‑1             TTTTTCCATTCGCGAAGCGCGGCGCTGGCTTCGGTTTTCAGTTGCTGCCAGGCGGGCAACTCAACATGTTTGGCGGTATCGACCCGAAAACCATCAATCCCATAGTCGCGGACCCACTGACTTAACCAGTGG                                                                                                                                                            >  1:161544/1‑132             TTTTTCCATTCGCGAAGCGCGGCGCTGGCTTCGGTTTTCAGTTGCTGCCAGGCGGGCAACTCAACATGTTTGGCGGTATCGACCCGAAAACCATCAATCCCATAGTCGCGGACCCACTGACTTAACCAGTGG                                                                                                                                                            <  2:161544/132‑1                            AGCGCGGCGCTGGCTTCGGTTTTCAGTTGCTGCCAGGCGGGCAACTCAACATGTTTGGCGGTATCGACCCGAAAACCATCAATCCCATAGTCGCGGACCCACTGACTTAACCAGTGGG                                                                                                                                                           <  4:732992/118‑1                            AGCGCGGCGCTGGCTTCGGTTTTCAGTTGCTGCCAGGCGGGCAACTCAACATGTTTGGCGGTATCGACCCGAAAACCATCAATCCCATAGTCGCGGACCCACTGACTTAACCAGTGGG                                                                                                                                                           >  3:732992/1‑118                                   CGCTGGCTTCGGTTTTCAGTTGCTGCCAGGCGGGCAACTCAACATGTTTGGCGGTATCGACCCGAAAACCATCAATCCCATAGTCGCGGACCCACTGACTTAACCAGTGGGTTA                                                                                                                                                        >  4:1028998/1‑114                                   CGCTGGCTTCGGTTTTCAGTTGCTGCCAGGCGGGCAACTCAACATGTTTGGCGGTATCGACCCGAAAACCATCAATCCCATAGTCGCGGACCCACTGACTTAACCAGTGGGTTA                                                                                                                                                        <  3:1028998/114‑1                                         CTTCGGTTTTCAGTTGCTGCCAGGCGGGCAACTCAACATGTTTGGCGGTATCGACCCGAAAACCATCAATCCCATAGTCGCGGACCCACTGACTTAACCAGTGGGTTAAG                                                                                                                                                      <  3:827246/110‑1                                         CTTCGGTTTTCAGTTGCTGCCAGGCGGGCAACTCAACATGTTTGGCGGTATCGACCCGAAAACCATCAATCCCATAGTCGCGGACCCACTGACTTAACCAGTGGGTTAAG                                                                                                                                                      >  4:827246/1‑110                                                TTTCAGTTGCTGCCAGGCGGGCAACTCAACATGTTTGGCGGTATCGACCCGAAAACCATCAATCCCATAGTCGCGGACCCACTGACTTAACCAGTGGGTTA                                                                                                                                                        <  3:1143993/101‑1                                                TTTCAGTTGCTGCCAGGCGGGCAACTCAACATGTTTGGCGGTATCGACCCGAAAACCATCAATCCCATAGTCGCGGACCCACTGACTTAACCAGTGGGTTA                                                                                                                                                        >  4:1143993/1‑101                                                TTTCAGTTGCTGCCAGGCGGGCAACTCAACATGTTTGGCGGTATCGACCCGAAAACCATCAATCCCATAGTCGCGGACCCACTGACTTAACCAGTGGGTTA                                                                                                                                                        <  4:138358/101‑1                                                TTTCAGTTGCTGCCAGGCGGGCAACTCAACATGTTTGGCGGTATCGACCCGAAAACCATCAATCCCATAGTCGCGGACCCACTGACTTAACCAGTGGGTTA                                                                                                                                                        >  3:138358/1‑101                                                             CAGGCGGGCAACTCAACATGTTTGGCGGTATCGACCCGAAAACCATCAATCCCATAGTCGCGGACCCACTGACTTAACCAGTGGGTTA                                                                                                                                                        >  4:404604/1‑88                                                             CAGGCGGGCAACTCAACATGTTTGGCGGTATCGACCCGAAAACCATCAATCCCATAGTCGCGGACCCACTGACTTAACCAGTGGGTTA                                                                                                                                                        <  3:404604/88‑1                                                               GGCGGGCAACTCAACATGTTTGGCGGTATCGACCCGAAAACCATCAATCCCATAGTCGCGGACCCACTGACTTAACCAGTGGG                                                                                                                                                           >  4:172086/1‑83                                                               GGCGGGCAACTCAACATGTTTGGCGGTATCGACCCGAAAACCATCAATCCCATAGTCGCGGACCCACTGACTTAACCAGTGGG                                                                                                                                                           <  3:172086/83‑1                                                                             CATGTTTGGCGGTATCGACCCGAAAACCATCAATCCCATAGTCGCGGACCCACTGACTTAACCAGTGGGTTA                                                                                                                                                        <  1:48901/72‑1                                                                             CATGTTTGGCGGTATCGACCCGAAAACCATCAATCCCATAGTCGCGGACCCACTGACTTAACCAGTGGGTTA                                                                                                                                                        >  2:48901/1‑72                                                                                                CCGAAAACCATCAATCCCATAGTCGCGGACCCACTGACTTAACCAGTGGGTTAAGT                                                                                                                                                     <  2:371989/56‑1                                                                                                CCGAAAACCATCAATCCCATAGTCGCGGACCCACTGACTTAACCAGTGGGTTAAGT                                                                                                                                                     >  1:371989/1‑56                                                                                                               CCCATAGTCGCGGACCCACTGACTTAACCAGTGGGTTAAG                                                                                                                                                      <  3:1079641/40‑1                                                                                                               CCCATAGTCGCGGACCCACTGACTTAACCAGTGGGCTAAG                                                                                                                                                      >  4:1079641/1‑40                                                                                                                                 CTGACTTAACCAGTGGGTTAAGTCAGTGGGTCCGCGACTATGGGATTGATGGTTTTCGGGTCGATACCGCCAAACATGTTGAGTTGCCCGCCTGGCAGCAACTGAAAACCGAAGCCAGCGCCGCGCTTCGCGAATGGAAAAAAGCTAA                        >  2:472246/1‑148                                                                                                                                 CTGACTTAACCAGTGGGTTAAGTCAGTGGGTCCGCGACTATGGGATTGATGGTTTTCGGGTCGATACCGCCAAACATGTTGAGTTGCCCGCCTGGCAGCAA                                                                       >  2:636254/1‑101                                                                                                                                 CTGACTTAACCAGTGGGTTAAGTCAGTGGGTCCGCGACTATGGGATTGATGGTTTTCGGGTCGATACCGCCAAACATGTTGAGTTGCCCGCCTGGCAGCAA                                                                       <  1:636254/101‑1                                                                                                                                 CTGACTTAACCAGTGGGTTAAGTAAGTGGGTCCGCGACTATGGGATTGATGGTTTTCGGGTCGATACCGCCAAACATGTTGAGTTGCCCGCCTGGCAGCAACTGAAAACCGAAGCCAGCGCCGCGCTTCGCGAATGGAAAAA                              <  4:666938/142‑1                                                                                                                                 CTGACTTAACCAGTGGGTTAAGTAAGTGGGTCCGCGACTATGGGATTGATGGTTTTCGGGTCGATACCGCCAAACATGTTGAGTTGCCCGCCTGGCAGCAACTGAAAACCGAAGCCAGCGCCGCGCTTCGCGAATGGAAAAA                              >  3:666938/1‑142                                                                                                                                   GACTTAACCAGTGGGTTAAGTCAGTGGGTCCGCGACTATGGGATTGATGGTTTTCGGGTCGATACCGCCAAACATGTTGAGTTGCCCGCCTGGCAGCA                                                                        >  4:133646/1‑98                                                                                                                                   GACTTAACCAGTGGGTTAAGTCAGTGGGTCCGCGACTATGGGATTGATGGTTTTCGGGTCGATACCGCCAAACATGTTGAGTTGCCCGCCTGGCAGCA                                                                        <  3:133646/98‑1                                                                                                                                     CTTAACCAGTGGGTTAAGTCAGTGGGTCCGCGACTATGGGATTGATGGTTTTCGGGTCGATACCGCCAAACATGTTGAGTTGCCCGCCTGGCAGCAACTGAAAACCGAAGCCAGCGCCGCGCTTCGCG                                        <  3:707245/128‑1                                                                                                                                     CTTAACCAGTGGGTTAAGTCAGTGGGTCCGCGACTATGGGATTGATGGTTTTCGGGTCGATACCGCCAAACATGTTGAGTTGCCCGCCTGGCAGCAACTGAAAACCGAAGCCAGCGCCGCGCTTCGCG                                        >  4:707245/1‑128                                                                                                                                     CTTAACCAGTGGGTTAAGTCAGTGGGTCCGCGACTATGGGATTGATGGTTTTCGGGTCGATACCGCCAAACATGTTGAGTTGCCCGCCTGGCAGCA                                                                        >  3:1106280/1‑96                                                                                                                                     CTTAACCAGTGGGTTAAGTCAGTGGGTCCGCGACTATGGGATTGATGGTTTTCGGGTCGATACCGCCAAACATGTTGAGTTGCCCGCCTGGCAGCA                                                                        <  4:1106280/96‑1                                                                                                                                     CTTAACCAGTGGGTTAAGTCAGTGGGTCCGCGACTATGGGATTGATGGTTTTCGGGTCGATACCGCCAAACATGT                                                                                             <  1:403539/75‑1                                                                                                                                     CTTAACCAGTGGGTTAAGTCAGTGGGTCCGCGACTATGGGATTGATGGTTTTCGGGTCGATACCGCCAAACATGT                                                                                             >  2:403539/1‑75                                                                                                                                     CTTAACCAGTGGGTTAAGTCAGTGGGTCCGCGACTATGGGATTGAT                                                                                                                          <  4:376318/46‑1                                                                                                                                     CTTAACCAGTGGGTTAAGTCAGTGGGTCCGCGACTATGGGATTGAT                                                                                                                          >  3:376318/1‑46                                                                                                                                      TTAACCAGTGGGTTAAGTCAGTGGGTCCGCGACTATGGGATTG                                                                                                                            <  4:32892/43‑1                                                                                                                                      TTAACCAGTGGGTTAAGTCAGTGGGTCCGCGACTATGGGATTG                                                                                                                            >  3:32892/1‑43                                                                                                                                       TAACCAGTGGGTTAAGTCAGTGGGTCCGCGACTATGGGATTGATGGTTTTCGGGTCGATACCGCCAAACATGTTGAGTTGCCCGCCTGGCAGCAACTGAAAACCGAAGCCAGCGCCGCGCTTCGCGAAT                                     >  4:375714/1‑129                                                                                                                                       TAACCAGTGGGTTAAGTCAGTGGGTCCGCGACTATGGGATTGATGGTTTTCGGGTCGATACCGCCAAACATGTTGAGTTGCCCGCCTGGCAGCAACTGAAAACCGAAGCCAGCGCCGCGCTTCGCGAAT                                     <  3:375714/129‑1                                                                                                                                         ACCAGTGGGTTAAGTCAGTGGGTCCGCGACTATGGGATTGATGGTTTTCGGGTCGATACCGCCAAACATGTTGAGTTGCCCGCCTGGCAGCAACTGAAAACCGAAGCCAGCGCCGCGCTTCG                                          >  4:361557/1‑122                                                                                                                                         ACCAGTGGGTTAAGTCAGTGGGTCCGCGACTATGGGATTGATGGTTTTCGGGTCGATACCGCCAAACATGTTGAGTTGCCCGCCTGGCAGCAACTGAAAACCGAAGCCAGCGCCGCGCTTCG                                          <  3:361557/122‑1                                                                                                                                         ACCAGTGGGTTAAGTCAGTGGGTCCGCGACTATGGGATTGAT                                                                                                                          >  3:449073/1‑42                                                                                                                                         ACCAGTGGGTTAAGTCAGTGGGTCCGCGACTATGGGATTGAT                                                                                                                          <  4:449073/42‑1                                                                                                                                         ACCAGTGGGTTAAGTCAGTGGGTCCGCGACTATGGGATTGA                                                                                                                           >  4:88905/1‑41                                                                                                                                         ACCAGTGGGTTAAGTCAGTGGGTCCGCGACTATGGGATTGA                                                                                                                           <  3:88905/41‑1                                                                                                                                                GGTTAAGTCAGTGGGTCCGCGACTATGGGATTGATGGTTTTCGGGTCGATACCGCCAAACATGTTGAGTTGCCCGCC                                                                                <  4:726189/77‑1                                                                                                                                                GGTTAAGTCAGTGGGTCCGCGACTATGGGATTGATGGTTTTCGGGTCGATACCGCCAAACATGTTGAGTTGCCCGCC                                                                                >  1:245086/1‑77                                                                                                                                                GGTTAAGTCAGTGGGTCCGCGACTATGGGATTGATGGTTTTCGGGTCGATACCGCCAAACATGTTGAGTTGCCCGCC                                                                                <  2:245086/77‑1                                                                                                                                                GGTTAAGTCAGTGGGTCCGCGACTATGGGATTGATGGTTTTCGGGTCGATACCGCCAAACATGTTGAGTTGCCCGCC                                                                                >  3:726189/1‑77                                                                                                                                                GGTTAAGTCAGTGGGTCCGCGACTATGGGATTGATGGTTTTCGGGTCGATACCGCCAAACATGTT                                                                                            <  3:753580/65‑1                                                                                                                                                GGTTAAGTCAGTGGGTCCGCGACTATGGGATTGATGGTTTTCGGGTCGATACCGCCAAACATGTT                                                                                            >  4:753580/1‑65                                                                                                                                                  TTAAGTCAGTGGGTCCGCGACTATGGGATTGATGGTTTTCGGGTCGATACCGCCAAACATGTTGAGTTGCCCGCCTGGCAGCAACTGAAAACCGAAGCCAGCGCCGCGCTTCGCGAATGGAAAAAAGCTAACCCCGACAAAGCATTAG       <  4:55948/148‑1                                                                                                                                                  TTAAGTCAGTGGGTCCGCGACTATGGGATTGATGGTTTTCGGGTCGATACCGCCAAACATGTTGAGTTGCCCGCCTGGCAGCAACTGAAAACCGAAGCCAGCGCCGCGCTTCGCGAAT                                     <  2:950917/118‑1                                                                                                                                                  TTAAGTCAGTGGGTCCGCGACTATGGGATTGATGGTTTTCGGGTCGATACCGCCAAACATGTTGAGTTGCCCGCCTGGCAGCAACTGAAAACCGAAGCCAGCGCCGCGCTTCGCGAAT                                     >  1:950917/1‑118                                                                                                                                                  TTAAGTCAGTGGGTCCGCGACTATGGGATTGATGGTTTTCGGGTCGATACCGCCAAACATGTTGAGTTGCCCGCCTGGCAGCAACTGAAAACCGAAGCCAGCGCCGCGCTTCGCGAA                                      <  4:66249/117‑1                                                                                                                                                  TTAAGTCAGTGGGTCCGCGACTATGGGATTGATGGTTTTCGGGTCGATACCGCCAAACATGTTGAGTTGCCCGCCTGGCAGCAACTGAAAACCGAAGCCAGCGCCGCGCTTCGCGAA                                      >  3:66249/1‑117                                                                                                                                                  TTAAGTCAGTGGGTCCGCGACTATGGGATTGATGGTTTTCGGGTCGATACCGCCAAACATGTTGAGTTGCCCGCCTGGCAGCAACTGAAAACCGAAGCCAGCGCCGCGCTTCGC                                         >  2:155489/1‑114                                                                                                                                                  TTAAGTCAGTGGGTCCGCGACTATGGGATTGATGGTTTTCGGGTCGATACCGCCAAACATGTTGAGTTGCCCGCCTGGCAGCAACTGAAAACCGAAGCCAGCGCCGCGCTTCGC                                         <  1:155489/114‑1                                                                                                                                                  TTAAGTCAGTGGGTCCGCGACTATGGGATTGATGGTTTTCGGGTCGATACCGCCAAACATGTTGAGTTGCCCGCCTGGCAGCAACTGAAAACCGAAGCCAGCGCCGCGCTTCG                                          >  2:336574/1‑113                                                                                                                                                  TTAAGTCAGTGGGTCCGCGACTATGGGATTGATGGTTTTCGGGTCGATACCGCCAAACATGTTGAGTTGCCCGCCTGGCAGCAACTGAAAACCGAAGCCAGCGCCGCGCTTCG                                          <  1:336574/113‑1                                                                                                                                                  TTAAGTCAGTGGGTCCGCGACTATGGGATTGATGGTTTTCGGGTCGATACCGCCAAACATGTTGAGTTGCCCGCCTGGCAGCAACTGAAAACCGA                                                            <  2:90716/95‑1                                                                                                                                                  TTAAGTCAGTGGGTCCGCGACTATGGGATTGATGGTTTTCGGGTCGATACCGCCAAACATGTTGAGTTGCCCGCCTGGCAGCAACTGAAAACCGA                                                            >  1:90716/1‑95                                                                                                                                                  TTAAGTCAGTGGGTCCGCGACTATGGGATTGATGGTTTTCGGGTCGATACCGCCAAACATGTTGAGTTGCCCGCCTGGCAGCAACTGAAAACCGA                                                            >  3:412053/1‑95                                                                                                                                                  TTAAGTCAGTGGGTCCGCGACTATGGGATTGATGGTTTTCGGGTCGATACCGCCAAACATGTTGAGTTGCCCGCCTGGCAGCAACTGAAA                                                                 <  4:95675/90‑1                                                                                                                                                  TTAAGTCAGTGGGTCCGCGACTATGGGATTGATGGTTTTCGGGTCGATACCGCCAAACATGTTGAGTTGCCCGCCTGGCAGCAACTGAAA                                                                 >  3:95675/1‑90                                                                                                                                                  TTAAGTCAGTGGGTCCGCGACTATGGGATTGATGGTTTTCGGGTCGATACCGCCAAACATGTTGAGTTGCCCGCC                                                                                <  3:761549/75‑1                                                                                                                                                  TTAAGTCAGTGGGTCCGCGACTATGGGATTGATGGTTTTCGGGTCGATACCGACAAACATGTTGAGTTGCCCGCCTGGCAGCAACTGAAAACCGA                                                            <  4:412053/95‑1                                                                                                                                                  TTAAGTCAGTGGGTCCGAGACTATGGGATTGATGGTTTTCGGGTCGATACCGCCAAACATGTTGAGTTGCCCGCC                                                                                >  4:761549/1‑75                                                                                                                                                     AGTCAGTGGGTCCGCGACTATGGGATTGATGGTTTTCGGGTCGATACCGCCAAACATGTTGAGTTGCCCGCCTGGCAGCAACTGAAAACCGAAGCCAGCGCCGCGCTTCGCGAATGGAAAAAAGCTAACCCCGACAAAGCATTAGATG    >  4:922314/1‑148                                                                                                                                                     AGTCAGTGGGTCCGCGACTATGGGATTGATGGTTTTCGGGTCGATACCGCCAAACATGTTGAGTTGCCCGCCTGGCAGCAACTGAAAACCGAAGCCAGCGCCGCGCTTCGCGAATGGAAAAAAGCTAACCCCGACAAAGCATTAGATG    >  4:399118/1‑148                                                                                                                                                     AGTCAGTGGGTCCGCGACTATGGGATTGATGGTTTTCGGGTCGATACCGCCAAACATGTTGAGTTGCCCGCCTGGCAGCAACTGAAAACCGAAGCCAGCGCCGCGCTTCGCGAATGGAAAAAAGCTAACCCCGACAAAGCATTAGATG    <  3:399118/148‑1                                                                                                                                                     AGTCAGTGGGTCCGCGACTATGGGATTGATGGTTTTCGGGTCGATACCGCCAAACATGTTGAGTTGCCCGCCTGGCAGCAACTGAAAACCGAAGCCAGCGCCGCGCTTCGCGAATGGAAAAAAGCTAACCCCGACAAAGCATT         >  3:429876/1‑143                                                                                                                                                     AGTCAGTGGGTCCGCGACTATGGGATTGATGGTTTTCGGGTCGATACCGCCAAACATGTTGAGTTGCCCGCCTGGCAGCAACTGAAAACCGAAGCCAGCGCCGCGCTTCGCGAATGGAAAAAAGCTAACCCCGACAAAGCATT         <  4:429876/143‑1                                                                                                                                                      GTCAGTGGGTCCGCGACTATGGGATTGATGGTTTTCGGGTCGATACCGCCAAACATGTTGAGTTGCCCGCCTGGCAGCAACTGAAAACCGAAGCCAGCGCCGCGCTTCG                                          >  2:303949/1‑109                                                                                                                                                      GTCAGTGGGTCCGCGACTATGGGATTGATGGTTTTCGGGTCGATACCGCCAAACATGTTGAGTTGCCCGCCTGGCAGCAACTGAAAACCGAAGCCAGCGCCGCGCTTCG                                          <  1:303949/109‑1                                                                                                                                                      GTCAGTGGGTCCGCGACTATGGGATTGATGGTTTTCGGGTCGATACCGCCAAACAT                                                                                               <  4:509437/56‑1                                                                                                                                                      GTCAGTGGGTCCGCGACTATGGGATTGATGGTTTTCGGGTCGATACCGCCAAACAT                                                                                               >  3:509437/1‑56                                                                                                                                                       TCAGTGGGTCCGCGACTATGGGATTGATGGTTTTCGGGTCGATACCGCCAAACATGTTGAGTTGCCCGCCTGGCAGCAACTGAAAACCGAAGCCAGCGCCGCGCTTCGCGAATGGAAAAAAGCTAACCCCGACAAAGCATTAGATGAC  <  1:442314/148‑1                                                                                                                                                       TCAGTGGGTCCGCGACTATGGGATTGATGGTTTTCGGGTCGATACCGCCAAACATGTTGAGTTGCCCGCCTGGCAGCAACTGAAAACCGAAGCCAGCGCCGCGCTTCG                                          >  2:130200/1‑108                                                                                                                                                       TCAGTGGGTCCGCGACTATGGGATTGATGGTTTTCGGGTCGATACCGCCAAACATGTTGAGTTGCCCGCCTGGCAGCAACTGAAAACCGAAGCCAGCGCCGCGCTTCG                                          <  1:130200/108‑1                                                                                                                                                       TCAGTGGGTCCGCGACTATGGGATTGATGGTTTTCGGGTCGATACCGCCAAACATGTTGAGTTGCCCGCCTGGCAGCAACTGAAAACCGA                                                            >  1:120341/1‑90                                                                                                                                                       TCAGTGGGTCCGCGACTATGGGATTGATGGTTTTCGGGTCGATACCGCCAAACATGTTGAGTTGCCCGCCTGGCAGCAACTGAAAACCGA                                                            <  2:120341/90‑1                                                                                                                                                                                                                                                                                                            TCGGGGTTAGCTTTTTTCCATTCGCGAAGCGCGGCGCTGGCTTCGGTTTTCAGTTGCTGCCAGGCGGGCAACTCAACATGTTTGGCGGTATCGACCCGAAAACCATCAATCCCATAGTCGCGGACCCACTGACTTAACCAGTGGGTTAAGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/3738965‑3738815 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggttaagtCAGTGGGTCCGCGACTATGGGATTGATGGTTTTCGGGTCGATACCGCCAAACATGTTGAGTTGCCCGCCTGGCAGCAACTGAAAACCGAAGCCAGCGCCGCGCTTCGCGAATGGAAAAAAGCTAACCCCGACAAAGCATTAGATGAC  >  NC_000913/3738835‑3738981

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.