BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	3738815 =	213 (2.280)	25 (0.290)	16/184	NT	11.9%	coding (1319/2031 nt)	malS	alpha‑amylase
*	?	NC_000913	3738835 =	174 (2.030)	25 (0.290)	16/184	NT	11.9%	coding (1339/2031 nt)	malS	alpha‑amylase

Only 100 of 316 total aligned reads displayed.

ATCCTGGATTCGACGATCTCACTATGTCGCTAGCCTTTTTGCCGGATATCAAAACCGAATCAACTACCGCTTCTGGTCTGCCGGTGTTCTATAAAAACAAAATGGATACCCACGCCAAAGCCATTGACGGCTATACGCCGCGCGATTACTTAACCCACTGGTTAAGTCAGTGGGTCCGCGACTATGGGATTGATGGTTTTCGGGTCGATACCGCCAAACATGTTGAGTTGCCCGCCTGGCAGCAACTGAAAACCGAAGCCAGCGCCGCGCTTCGCGAATGGAAAAAAGCTAACC  >  NC_000913/3738668‑3738961

  catctaatgctttgtcggggttagcttttttccattcgcgaagcgcggcgctggcttcggttttcagttgctgccaggcgggcaactcaacatgtttggcggtatcgacccgaaaaccatcaatcccatagtcgcggacccactgACt                                                                                                                                                  >  4:922314‑M1/146‑148 (MQ=255)

     ctaatgctttgtcggggttagcttttttccattcgcgaagcgcggcgctggcttcggttttcagttgctgccaggcgggcaactcaacatgtttggcggtatcgacccgaaaaccatcaatcccatagtcgcggacccactgACTTaa                                                                                                                                               <  4:55948‑M1/6‑1 (MQ=255)

       aatgctttgtcggggttagcttttttccattcgcgaagcgcggcgctggcttcggttttcagttgctgccaggcgggcaactcaacatgtttggcggtatcgacccgaaaaccatcaatcccatagtcgcggacccactgACt                                                                                                                                                  <  4:429876‑M1/3‑1 (MQ=255)

       aatgctttgtcggggttagcttttttccattcgcgaagcgcggcgctggcttcggttttcagttgctgccaggcgggcaactcaacatgtttggcggtatcgacccgaaaaccatcaatcccatagtcgcggacccactgACt                                                                                                                                                  >  3:429876‑M1/141‑143 (MQ=255)

            acgaTCTCACTATGTCGCTAGCCTTTTTGCCGGATATCAAAACCGAATCAACTACCGCTTCTGGTCTGCCGGTGTTCTATAAAAACAAAATGGATACCCACGCCAAAGCCATTGACGGCTATACGCCGCGCGATTACTTAAcc                                                                                                                                             >  4:90150/1‑143 (MQ=255)

            acgaTCTCACTATGTCGCTAGCCTTTTTGCCGGATATCAAAACCGAATCAACTACCGCTTCTGGTCTGCCGGTGTTCTATAAAAACAAAATGGATACCCACGCCAAAGCCATTGACGGCTATACGCCGCGCGATTACTTAAcc                                                                                                                                             <  3:90150/143‑1 (MQ=255)

               aTCTCACTATGTCGCTAGCCTTTTTGCCGGATATCAAAACCGAATCAACTACCGCTTCTGGTCTGCCGGTGTTCTATAAAAACAAAATGGATACCCACGCCAAAGCCATTGACGGCTATACGCCGCGCGATTACTTAACCCACt                                                                                                                                         <  3:1020105/144‑1 (MQ=255)

                tctcACTATGTCGCTAGCCTTTTTGCCGGATATCAAAACCGAATCAACTACCGCTTCTGGTCTGCCGGTGTTCTATAAAAACAAAATGGATACCCACGCCAAAGCCATTGACGGCTATACGCCGCGCGATTACTTAACCCACTGGTTa                                                                                                                                    <  1:750560/148‑1 (MQ=255)

                    aCTATGTCGCTAGCCTTTTTGCCGGATATCAAAACCGAATCAACTACCGCTTCTGGTCTGCCGGTGTTCTATAAAAACAAAATGGATACCCACGCCAAAGCCATTGACGGCTATACGCCGCGCGATTACTTAACCCACTGGTTAAg                                                                                                                                  <  1:494882/146‑1 (MQ=255)

                       aTGTCGCTAGCCTTTTTGCCGGATATCAAAACCGAATCAACTACCGCTTCTGGTCTGCCGGTGTTCTATAAAAACAAAATGGATACCCACGCCAAAGCCATTGACGGCTATACGCCGCGCGATTACTTAACCCa                                                                                                                                           <  1:147316/134‑1 (MQ=255)

                                 ccTTTTTGCCGGATATCAAAACCGAATCAACTACCGCTTCTGGTCTGCCGGTGTTCTATAAAAACAAAATGGATACCCACGCCAAAGCCATTGACGGCTATACGCCGCGCGATTACTTAACCCACTGGt                                                                                                                                      <  1:655911/129‑1 (MQ=255)

                                   tttttGCCGGATATCAAAACCGAATCAACTACCGCTTCTGGTCTGCCGGTGTTCTATAAAAACAAAATGGATACCCACGCCAAAGCCATTGACGGCTATACGCCGCGCGATTACTTAACCCACTGGTTAAGTCAGTGGGTCCGCGACt                                                                                                                 <  3:1085674/148‑1 (MQ=255)

                                   attcgcgaagcgcggcgctggcttcggttttcagttgctgccaggcgggcaactcaacatgtttggcggtatcgacccgaaaaccatcaatcccatagtcgcggacccactgACTTaa                                                                                                                                               <  2:950917‑M1/6‑1 (MQ=255)

                                    ttttGCCGGATATCAAAACCGAATCAACTACCGCTTCTGGTCTGCCGGTGTTCTATAAAAACAAAATGGATACCCACGCCAAAGCCATTGACGGCTATACGCCGCGCGATTACTTAACCCACTGGTTAAGTCAGTGGGTCCGCGACTa                                                                                                                >  1:411145/1‑148 (MQ=255)

                                      cgcgaagcgcggcgctggcttcggttttcagttgctgccaggcgggcaactcaacatgtttggcggtatcgacccgaaaaccatcaatcccatagtcgcggacccactgACTTAACCCACTGGTTAAg                                                                                                                                  >  4:707245‑M1/110‑128 (MQ=255)

                                      cgcgaagcgcggcgctggcttcggttttcagttgctgccaggcgggcaactcaacatgtttggcggtatcgacccgaaaaccatcaatcccatagtcgcggacccactgACTTAACCCACTGGTTAAg                                                                                                                                  <  3:707245‑M1/19‑1 (MQ=255)

                                        cgaagcgcggcgctggcttcggttttcagttgctgccaggcgggcaactcaacatgtttggcggtatcgacccgaaaaccatcaatcccatagtcgcggacccactga                                                                                                                                                    <  1:130200‑M1/1‑1 (MQ=255)

                                        cgaagcgcggcgctggcttcggttttcagttgctgccaggcgggcaactcaacatgtttggcggtatcgacccgaaaaccatcaatcccatagtcgcggacccactgAc                                                                                                                                                   >  2:303949‑M1/108‑109 (MQ=255)

                                        cgaagcgcggcgctggcttcggttttcagttgctgccaggcgggcaactcaacatgtttggcggtatcgacccgaaaaccatcaatcccatagtcgcggacccactgACTTaa                                                                                                                                               <  1:336574‑M1/6‑1 (MQ=255)

                                        cgaagcgcggcgctggcttcggttttcagttgctgccaggcgggcaactcaacatgtttggcggtatcgacccgaaaaccatcaatcccatagtcgcggacccactgACTTAACCCACTGGt                                                                                                                                      <  3:361557‑M1/15‑1 (MQ=255)

                                        cgaagcgcggcgctggcttcggttttcagttgctgccaggcgggcaactcaacatgtttggcggtatcgacccgaaaaccatcaatcccatagtcgcggacccactgACTTAACCCACTGGt                                                                                                                                      >  4:361557‑M1/108‑122 (MQ=255)

                                             atatCAAAACCGAATCAACTACCGCTTCTGGTCTGCCGGTGTTCTATAAAAACAAAATGGATACCCACGCCAAAGCCATTGACGGCTATACGCCGCGCGATTACTTAACCCACTGGTTAAg                                                                                                                                  <  2:694677/121‑1 (MQ=255)

                                                 cAAAACCGAATCAACTACCGCTTCTGGTCTGCCGGTGTTCTATAAAAACAAAATGGATACCCACGCCAAAGCCATTGACGGCTATACGCCGCGCGATTACTTAACCCAc                                                                                                                                          >  4:102822/1‑109 (MQ=255)

                                                    aaCCGAATCAACTACCGCTTCTGGTCTGCCGGTGTTCTATAAAAACAAAATGGATACCCACGCCAAAGCCATTGACGGCTATACGCCGCGCGATTACTTAACCCACTGGTTAAGTCAGTGGGTCCGCGACTATGGGATTGATGGtttt                                                                                                <  2:537732/148‑1 (MQ=255)

                                                       cGAATCAACTACCGCTTCTGGTCTGCCGGTGTTCTATAAAAACAAAATGGATACCCACGCCAAAGCCATTGACGGCTATACGCCGCGCGATTACTTAACCCACTGGTTAAGTCAGt                                                                                                                             <  1:179744/116‑1 (MQ=255)

                                                          tcggttttcagttgctgccaggcgggcaactcaacatgtttggcggtatcgacccgaaaaccatcaatcccatagtcgcggacccactga                                                                                                                                                    <  2:120341‑M1/1‑1 (MQ=255)

                                                              aCTACCGCTTCTGGTCTGCCGGTGTTCTATAAAAACAAAATGGATACCCACGCCAAAGCCATTGACGGCTATACGCCGCGCGATTAc                                                                                                                                                   >  2:312235/1‑87 (MQ=255)

                                                               tttcagttgctgccaggcgggcaactcaacatgtttggcggtatcgacccgaaaaccatcaatcccatagtcgcggacccactgACTTaa                                                                                                                                               >  3:95675‑M1/85‑90 (MQ=255)

                                                                tACCGCTTCTGGTCTGCCGGTGTTCTATAAAAACAAAATGGATACCCACGCCAAAGCCATTGACGGCTATACGCCGCGCGATTACTTAACCCACTGGTTAAGTCAg                                                                                                                              <  2:133619/106‑1 (MQ=255)

                                                                   cGCTTCTGGTCTGCCGGTGTTCTATAAAAACAAAATGGATACCCACGCCAAAGCCATTGACGGCTATACGCCGCGCGATTa                                                                                                                                                    <  4:1110505/81‑1 (MQ=255)

                                                                   cGCTTCTGGTCTGCCGGTGTTCTATAAAAACAAAATGGATACCCACGCCAAAGCCATTGACGGCTATACGCCGCGCGATTACTTAACCCACTGGTTAAGTCAGTGGGTCCGCGACTATGGGAt                                                                                                          >  3:10778/1‑123 (MQ=255)

                                                                     ttgctgccaggcgggcaactcaacatgtttggcggtatcgacccgaaaaccatcaatcccatagtcgcggacccactgACTTAACCCACTGGTTAAGTCAg                                                                                                                              <  1:636254‑M1/23‑1 (MQ=255)

                                                                      tgctgccaggcgggcaactcaacatgtttggcggtatcgacccgaaaaccatcaatcccatagtcgcggacccactgACTTAACCCACTGGTTAAGTc                                                                                                                                <  3:133646‑M1/21‑1 (MQ=255)

                                                                            tCTGCCGGTGTTCTATAAAAACAAAATGGATACCCACGCCAAAGCCATTGACGGCTATACGCCGCGCGATTACTTAACCCACTGGTTAAGTCAg                                                                                                                              >  2:622181/1‑94 (MQ=255)

                                                                             cTGCCGGTGTTCTATAAAAACAAAATGGATACCCACGCCAAAGCCATTGACGGCTATACGCCGCGCGATTACTTAACCCACTGGTTAAGTCAGTGGGTCCGCGACTAt                                                                                                               >  2:471009/1‑108 (MQ=255)

                                                                             cTGCCGGTGTTCTATAAAAACAAAATGGATACCCACGCCAAAGCCATTGACGGCTATACGCCGCGCGATTACTTAACCCACTGGTTAAGTCAGTGGGTCCGCGACTAt                                                                                                               <  1:471009/108‑1 (MQ=255)

                                                                             cTGCCGGTGTTCTATAAAAACAAAATGGATACCCACGCCAAAGCCATTGACGGCTATACGCCGCGCGATTACTTAACCCACTGGTTAAGTCAGTGGGTCCGCGACTATGGGATTGATGGTTTTCggg                                                                                            <  1:831152/127‑1 (MQ=255)

                                                                              ggcgggcaactcaacatgtttggcggtatcgacccgaaaaccatcaatcccatagtcgcggacccactgACTTAAcc                                                                                                                                             >  3:726189‑M1/70‑77 (MQ=255)

                                                                              ggcgggcaactcaacatgtttggcggtatcgacccgaaaaccatcaatcccatagtcgcggacccactgACTTAAcc                                                                                                                                             <  4:726189‑M1/8‑1 (MQ=255)

                                                                              ggcgggcaactcaacatgtttggcggtatcgacccgaaaaccatcaatcccatagtcgcggacccactgACTTAAcc                                                                                                                                             <  2:245086‑M1/8‑1 (MQ=255)

                                                                                  ggTGTTCTATAAAAACAAAATGGATACCCACGCCAAAGCCATTGACGGCTATACGCCGCGCGATTACTTAACCCa                                                                                                                                           >  4:953431/1‑75 (MQ=255)

                                                                                       tCTATAAAAACAAAATGGATACCCACGCCAAAGCCATTGACGGCTATACGCCGCGCGATTACTTAACCCACTGGTTAAGTCAGTGGGTCCGCGACTATGGGATTGATGGTTTTc                                                                                               <  3:318314/114‑1 (MQ=255)

                                                                                          ataAAAACAAAATGGATACCCACGCCAAAGCCATTGACGGCTATACGCCGCGCGATTACTTAACCCACTGGTTAAGTCAGTGGGTCCGCGACTATGGGATTGATGGTTTTCGGGTCg                                                                                         <  4:147673/117‑1 (MQ=255)

                                                                                          ataAAAACAAAATGGATACCCACGCCAAAGCCATTGACGGCTATACGCCGCGCGATTACTTAACCCACTGGTTAAGTCAGTGGGTCCGCGACTATGGGATTGATGGTTTTCGGGTCGATACCGCCAAACATGTTGa                                                                      >  2:157913/1‑136 (MQ=255)

                                                                                          ataAAAACAAAATGGATACCCACGCCAAAGCCATTGACGGCTATACGCCGCGCGATTACTTAACCCACTGGTTAAGTCAGTGGGTCCGCGACTATGGGATTGATGGTTTTCGGGTCGATACCGCCAAACATGTTGAGTTGCCCGcc                                                            <  4:866897/146‑1 (MQ=255)

                                                                                          ataAAAACAAAATGGATACCCACGCCAAAGCCATTGACGGCTATACGCCGCGCGATTACTTAACCCACTGGTTAAGTCAGTGGGTCCGCGACTATGGGATTGATGGTTTTCGGGTCGATACCGCCAAACATGTTGAGTTGCCCGcc                                                            >  3:866897/1‑146 (MQ=255)

                                                                                           acatgtttggcggtatcgacccgaaaaccatcaatcccatagtcgcggacccactgACTTAACCCACTGGTTAAg                                                                                                                                  <  1:403539‑M1/19‑1 (MQ=255)

                                                                                            aaaaaCAAAATGGATACCCACGCCAAAGCCATTGACGGCTATACGCCGCGCGATTACTTAACGCACTGGTTAAGTCAGTGGGTCCGCGACTATGGGATTGATGGttt                                                                                                 >  4:778307/1‑107 (MQ=255)

                                                                                            aaaaaCAAAATGGATACCCACGCCAAAGCCATTGACGGCTATACGCCGCGCGATTACTTAACCCACTGGTTAAGTCAg                                                                                                                              >  2:742388/1‑78 (MQ=255)

                                                                                            aaaaaCAAAATGGATACCCACGCCAAAGCCATTGACGGCTATACGCCGCGCGATTACTTAACCCACTGGTTAAGTCAg                                                                                                                              >  3:151862/1‑78 (MQ=255)

                                                                                            aaaaaCAAAATGGATACCCACGCCAAAGCCATTGACGGCTATACGCCGCGCGATTACTTAACCCACTGGTTAAGTCAGTGGGTCCGCGACTATGGGATTGATGGttt                                                                                                 <  3:778307/107‑1 (MQ=255)

                                                                                            aaaaaCAAAATGGATACCCACGCCAAAGCCATTGACGGCTATACGCCGCGCGATTACTTAACCCACTGGTTAAGTCAGTGGGTCCGCGACTATGGGATTGATGGTTTTCGGGTCGATACCGCCAAACATGTTGAGTTGCCCGcc                                                            >  1:358425/1‑144 (MQ=255)

                                                                                            aaaaaCAAAATGGATACCCACGCCAAAGCCATTGACGGCTATACGCCGCGCGATTACTTAACCCACTGGTTAAGTCAGTGGGTCCGCGACTATGGGATTGATGGTTTTCGGGTCGATACCGCCAAACATGTTGAGTTGCCCGCCTGgc                                                        >  4:1066987/1‑148 (MQ=255)

                                                                                             atgtttggcggtatcgacccgaaaaccatcaatcccatagtcgcggacccactgAc                                                                                                                                                   <  4:509437‑M1/2‑1 (MQ=255)

                                                                                             atgtttggcggtatcgacccgaaaaccatcaatcccatagtcgcggacccactgAc                                                                                                                                                   >  3:509437‑M1/55‑56 (MQ=255)

                                                                                               aaCAAAATGGATACCCACGCCAAAGCCATTGACGGCTATACGCCGCGCGATTACTTAACCCACTGGTTAAGTCAGTGGGTCCGCGACTATGGGATTGAt                                                                                                      <  4:681141/99‑1 (MQ=255)

                                                                                               aaCAAAATGGATACCCACGCCAAAGCCAGTGACGGCTATACGCCGCGCGATTACTTAACCCACTGGTTAAGTCAGTGGGTCCGCGACTATGGGATTGAt                                                                                                      >  3:681141/1‑99 (MQ=255)

                                                                                                aCAAAATGGATACCCACGCCAAAGCCATTGACGGCTATACGCCGCGCGATTa                                                                                                                                                    >  1:562538/1‑52 (MQ=255)

                                                                                                   aaaTGGATACCCACGCCAAAGCCATTGACGGCTATACGCCGCGCGATTACTTAACCCACTGGTTAAGTCAGTGGGTCCGCGACTATGGGATTGATGGTTTTCggg                                                                                            >  2:1036899/1‑105 (MQ=255)

                                                                                                   aaaTGGATACCCACGCCAAAGCCATTGACGGCTATACGCCGCGCGATTACTTAACCAGTGGGTTAAGta                                                                                                                                >  2:6462/1‑68 (MQ=38)

                                                                                                     aTGGATACCCACGCCAAAGCCATTGACGGCTATACGCCGCGCGATTACTTAACCCACTGGTTAAGTCAGTGGGTCCGCGACTATGGGATTGAt                                                                                                      >  2:354795/1‑93 (MQ=255)

                                                                                                         aTACCCACGCCAAAGCCATTGACGGCTATACGCCGCGCGATTACTTAACCCACTGGTTAAGTCAGTGGGTCCGCGACTATGGGATTGATGGTTTTCGGGTCGATACCGCCAAACATGTTGa                                                                      <  1:1097980/121‑1 (MQ=255)

                                                                                                          tACCCACGCCAAAGCCATTGACGGCTATACGCCGCGCGATTACTTAACCCACTGGTTAAGTCAGTGGGTCCGCGACTATGGGATTGATGGTTTTCGGGTCGATACCGCCaaa                                                                              >  3:931604/1‑112 (MQ=255)

                                                                                                            cccACGCCAAAGCCATTGACGGCTATACGCCGCGCGATTACTTAACCCACTgg                                                                                                                                       <  3:818098/53‑1 (MQ=255)

                                                                                                            cccACGCCAAAGCCATTGACGGCTATACGCCGCGCGATTACTTAACCCACTgg                                                                                                                                       >  4:818098/1‑53 (MQ=255)

                                                                                                              cACGCCAAAGCCATTGACGGCTATACGCCGCGCGATTACTTAACCCACTGGt                                                                                                                                      >  4:208194/1‑52 (MQ=255)

                                                                                                              cACGCCAAAGCCATTGACGGCTATACGCCGCGCGATTACTTAACCCACTGGTTAAGTCAGTGGGTCCGCGACTATGGGATTGATGGTTTTCGGGTCg                                                                                         <  1:873813/97‑1 (MQ=255)

                                                                                                              cACGCCAAAGCCATTGACGGCTATACGCCGCGCGATTACTTAACCCACTGGTTAAGTCAGTGGGTCCGCGACTATGGGATTGATGGTTTTCGGGTCGATACCGCCAAACATGt                                                                         <  3:459468/113‑1 (MQ=255)

                                                                                                              cACGCCAAAGCCATTGACGGCTATACGCCGCGCGATTACTTAACCCACTGGTTAAGTCAGTGGGTCCGCGACTATGGGATTGATGGTTTTCGGGTCGATACCGCCAAACATGt                                                                         >  4:459468/1‑113 (MQ=255)

                                                                                                                  ccAAAGCCATTGACGGCTATACGCCGCGCGATTACTTAACCCACTGGTTa                                                                                                                                    >  3:39190/1‑50 (MQ=255)

                                                                                                                  ccAAAGCCATTGACGGCTATACGCCGCGCGATTACTTAACCCACTGGTTa                                                                                                                                    <  4:39190/50‑1 (MQ=255)

                                                                                                                     aaGCCATTGACGGCTATACGCCGCGCGATTACTTAGCCCACTGGTTAAGTCAGTGGGTCCGCGACTATGGGATTGATGGTTTTCGGGTCGATACCGCCAAACATg                                                                          >  4:1079897/1‑105 (MQ=255)

                                                                                                                     aaGCCATTGACGGCTATACGCCGCGCGATTACTTAACCCACTGGTTAAGTCAGTGGGTCCGCGACTATg                                                                                                              <  2:816021/69‑1 (MQ=255)

                                                                                                                      aGCCATTGACGGCTATACGCCGCGCGATTACTTAACCCACTGGTTAAGTCAGTGGGTCCGCGACTATGGGATTGATGGTTTTCGGGTCGATACCGCCAAACATGTTGAGTTGCCCGCCTGGCAGCAACTGAAAACCGAAGCCAGcgcc                              >  2:1095074/1‑148 (MQ=255)

                                                                                                                       gCCATTGACGGCTATACGCCGCGCGATTACTTAACCCACTGGTTAAGTCAGTGGGTCCGCGACTATGGGATTGATGGTTTTCGGGTCGATACCGCCAAACATGTTGAGTTGCCCGCCTGGCAGCaa                                                   >  1:423476/1‑126 (MQ=255)

                                                                                                                         cATTGACGGCTATACGCCGCGCGATTACTTAACCCACTGGTTAAGTCAGTGGGTCCGCGACTATGGGATTGATGGtttt                                                                                                <  2:858371/79‑1 (MQ=255)

                                                                                                                          aTTGACGGCTATACGCCGCGCGATTACTTAACCCACTGGTTAAGTCAGTGGGTCCGCGACTATGGGATTGATGGTTTTCGGGTCGATACCGCCAAACATGTTGAGTTGCCCGCCTg                                                          >  1:1039424/1‑116 (MQ=255)

                                                                                                                            tGACGGCTATACGCCGCGCGATTACTTAACCCACTGGTTGAGTCAGTGGGTCCGCGACTATGGGATTGATGGTTTTCGGGt                                                                                           >  1:221143/1‑81 (MQ=255)

                                                                                                                            tGACGGCTATACGCCGCGCGATTACTTAACCCACTGGTTAAGTCAGTGGGTCCGCGACTATGGGAt                                                                                                          <  2:1072502/66‑1 (MQ=255)

                                                                                                                               cGGCTATACGCCGCGCGATTACTTAACCCACTGGTTAAGTCAGTGGGTCCGCGACTATGGGATTGATGGTTTTCggg                                                                                            >  4:323345/1‑77 (MQ=255)

                                                                                                                               cGGCTATACGCCGCGCGATTACTTAACCCACTGGTTAAGTCAGTGGGTCCGCGACTATGGGATTGATGGTTTTCGGGTCGATACCGCCAAACATGTTGAGTTGCCCGCCTGGCAGCAACTGAAAACCGAAGCCAGCGCCGCGCTTcgc                     >  3:402176/1‑148 (MQ=255)

                                                                                                                                 gCTATACGCCGCGCGATTACTTAACCCACTGGTTAAGTCAGTGGGTCCGCGACTATGGGATTGATGGTTTTCGGGTCGATACCGCCAAACAt                                                                           >  1:1003267/1‑92 (MQ=255)

                                                                                                                                 gCTATACGCCGCGCGATTACTTAACCCACTGGTTAAGTCAGTGGGTCCGCGACTATGGGATTGATGGTTTTCGGGTCGATACCGCCAAACATGTTGAGTTGCCCGCCTGGCAGCAACTGAAAACCGAAGCCAGCGCCGCGCTTCGCGa                   <  4:402176/148‑1 (MQ=255)

                                                                                                                                 gCTATACGCCGCGCGACTACTTAACCCACTGGTTAAGTCAGTGGGTCCGCGACTATGGGATTGATGGTTTTCGGGTCGATACCGCCAAACATGt                                                                         >  1:1074237/1‑94 (MQ=255)

                                                                                                                                  cTATACGCCGCGCGATTACTTAACCCACTGGTTAAGTCAGTGGGTCCGCGACTATGGGATTGATGGTTTTCGGGTCGATACCGCCAAACATGTTGAGTTGCCCGCCTGGCAGCAACTGAAAACCGAAGCCAGCGCCGCGCTTCGCGaa                  >  3:55948/1‑148 (MQ=255)

                                                                                                                                  cTATACGCCGCGCGATTACTTAACCCACTGGTTAAGTCAGTGGGTCCGCGACTATGGGATTGATGGTTTTCGGGTCGATACCGCCAAACATGTTGAGTTGCCCGCCTGGCAGCAACTGAAAACCGAAGCCAGCGCCGCGCTTCGCGaa                  <  3:1066987/148‑1 (MQ=255)

                                                                                                                                   tataCGCCGCGCGATTACTTAACCCACTGGTTAAGTCAGTGGGTCCGCGACTATGGGATTGATGGTTTTCGGGTCGATACCGCCAAACATGt                                                                         <  2:209681/92‑1 (MQ=255)

                                                                                                                                    ataCGCCGCGCGATTACTTAACCCACTGGTTAAGTCAGTGGGTCCGCGACTATGGGATTGATGGTTTTCGGGTCGATACCGCCAAACATg                                                                          <  2:48755/90‑1 (MQ=255)

                                                                                                                                    ataCGCCGCGCGATTACTTAACCCACTGGTTAAGTCAGTGGGTCCGCGACTATGGGATTGATGGTTTTCGGGTCGATACCGCCAAACATGTTGAGTTGCCCGCCTGGCAGCAACTGAAAACCGAAGCCAGCGCCGCGCTTCGCGa                   >  1:727866/1‑145 (MQ=255)

                                                                                                                                      aCGCCGCGCGATTACTTAACCCACTGGTTAAGTCAGTGGGTCCGCGACTATGGGATTGATGGTTTTCGGGt                                                                                           <  2:407853/71‑1 (MQ=255)

                                                                                                                                           gcgcgATTACTTAACCCACTGGTTAAGTCAGTGGGTCCGCGACTATGGGATTGATGGTTTTCGGGTCGATACCGCCAAACATGTTGa                                                                      <  1:305490/87‑1 (MQ=255)

                                                                                                                                                aTTACTTAACCCACTGGTTAAGTCAGTGGGTCCGCGACTATGGGATTGATGGTTTTCGGGTCGATACCGCCAAACATGTTGAGTTGCCCGCCTgg                                                         <  2:378838/95‑1 (MQ=255)

                                                                                                                                                aTTACTTAACCCACTGGTTAAGTCAGTGGGTCCGCGACTATGGGATTGATGGTTTTCGGGTCGATACCGCCAAACATGTTGAGTTGCCCGCCTgg                                                         <  4:753148/95‑1 (MQ=255)

                                                                                                                                                aTTACTTAACCCACTGGTTAAGTCAGTGGGTCCGCGACTATGGGATTGATGGTTTTCGGGTCGATACCGCCAAACATGTTGAGTTGCCCGCCTgg                                                         >  3:753148/1‑95 (MQ=255)

                                                                                                                                                aTTACTTAACCCACTGGTTAAGTCAGTGGGTCCGCGACTATGGGATTGATGGTTTTCGGGTCGATACCGCCAAACATGTTGAGTTGCCCGCCTGGCAGCAACTGaaa                                             <  1:990051/107‑1 (MQ=255)

                                                                                                                                                aTTACTTAACCCACTGGTTAAGTCAGTGGGTCCGCGACTATGGGATTGATGGTTTTCGGGTCGATACCGCCAAACATGTTGAGTTGCCCGCCTGGCAGCAACTGAAAACCGa                                        <  1:272367/112‑1 (MQ=255)

                                                                                                                                                aTTACTTAACCCACTGGTTAAGTCAGTGGGTCCGCGACTATGGGATTGATGGTTTTCGGGTCGATACCGCCAAACATGTTGAGTTGCCCGCCTGGCAGCAACTGAAAACCGAAGCCAGCGCCGCGCTTCGCGAATg                <  2:413973/136‑1 (MQ=255)

                                                                                                                                                  tACTTAACCCACTGGTTAAGTCAGTGGGTCCGCGACTATGGGATTGATGGTTTTCGGGTCGATACCGCCAAACATGTTGAGTTGCCCGCCTGGCAGCAACTGAAAACCGa                                        >  4:639369/1‑110 (MQ=255)

                                                                                                                                                  tACTTAACCCACTGGTTAAGTCAGTGGGTCCGCGACTATGGGATTGATGGTTTTCGGGTCGATACCGCCAAACATGTTGAGTTGCCCGCCTGGCAGCAACTGAAAACCGa                                        <  3:639369/110‑1 (MQ=255)

                                                                                                                                                  tACTTAACCCACTGGTTAAGTCAGTGGGTCCGCGACTATGGGATTGATGGTTTTCGGGTCGATACCGCCAAACATGTTGAGTTGCCCGCCTGGCAGCAACTGAAAACCGAAGCCAGCGCCGCGCTTCGCGAATGGAAAAAAGCTAAcc  >  3:172347/1‑148 (MQ=255)

ATCCTGGATTCGACGATCTCACTATGTCGCTAGCCTTTTTGCCGGATATCAAAACCGAATCAACTACCGCTTCTGGTCTGCCGGTGTTCTATAAAAACAAAATGGATACCCACGCCAAAGCCATTGACGGCTATACGCCGCGCGATTACTTAACCCACTGGTTAAGTCAGTGGGTCCGCGACTATGGGATTGATGGTTTTCGGGTCGATACCGCCAAACATGTTGAGTTGCCCGCCTGGCAGCAACTGAAAACCGAAGCCAGCGCCGCGCTTCGCGAATGGAAAAAAGCTAACC  >  NC_000913/3738668‑3738961

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 39 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.