BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 668251	83 (0.890)	8 (0.090)	7/182	NT	9.1%	coding (465/468 nt)	rlmH	23S rRNA m(3)Psi1915 pseudouridine methyltransferase, SAM‑dependent
*	?	NC_000913	= 668256	84 (0.990)	8 (0.090)	7/182	NT	9.1%	coding (460/468 nt)	rlmH	23S rRNA m(3)Psi1915 pseudouridine methyltransferase, SAM‑dependent

Only 100 of 132 total aligned reads displayed.

TGGCGATAAGCACGCCGGTCAGCAGCAAAATCCCCAAAAAGGCGACCAGCGCCCGGCGCACAAACAGCGCGGACTCTGCCGTATAGTCGCGAAAAGAGTTCTGTAGTTTCATCCGCTGCGTTTTCTACTCAAAGCTCCCTTATCACTCACGGTGATAAGGATGGTTGGTGGTGATGCTCCACGCCCGGTACAGACTCTCTGCGACCAGCACGCGAACCAGCGGATGGGGGAGGGTAAGCGCCGACAGCGACCAGCTCTGCTCAGCCGCCGCTTTACAGGCAGGCGACAACCCT  >  NC_000913/668106‑668398

tGGCGATAAGCACGCCGGTCAGCAGCAAAATCCCCAAAAAGGCGACCAGCGCCCGGCGCACAAACAGCGCGGACTCTGCCGTATAGTCGCGAAAAGAGTTCTGTAGTTTCATTCGCTGCGTTTTCTACTCAAAGCTCCCTTAtcactc                                                                                                                                                   >  2:431784/1‑148 (MQ=255)

       aaGCACGCCGGTCAGCAGCAAAATCCCCAAAAAGGCGACCAGCGCCCGGCGCACAAACAGCGCGGACTCTGCCGTATAGTCGCGAAAAGAGTTCTGTAGTTTCATCCGCTGCGTTTTCTACTCAAAGCTCCCTTATCACTCACGgtga                                                                                                                                            <  3:1013191‑M2/148‑5 (MQ=255)

          cACGCCGGTCAGCAGCAAAATCCCCAAAAAGGCGACCAGCGCCCGGCGCACAAACAGCGCGGACTCTGCCGTATAGTCGCGAAAAGAGTTCTGTAGTTTCATCCGCTGCGTTTTCTACTCAAAGCTCCCTTATCACTCACGg                                                                                                                                               <  3:1032969‑M2/142‑2 (MQ=255)

             gCCGGTCAGCAGCAAAATCCCCAAAAAGGCGACCAGCGCCCGGCGCACAAACAGCGCGGACTCTGCCGTATAGTCGCGAAAAGAGTTCTGTAGTTTCATCCGCTGCGTTTTCTACTCAAAGCTCCCTTATCACTCACGGTGATAAGGa                                                                                                                                      <  1:431784/148‑1 (MQ=255)

                            aaTCCCCAAAAAGGCGACCAGCGCCCGGCGCACAAACAGCGCGGACTCTGCCGTATAGTCGCGAAAAGAGTTCTGTAGTTTCATCCGCTGCGTTTTCTACTCAAAGCTCCCTTATCACTCACGg                                                                                                                                               <  1:509758‑M2/124‑2 (MQ=255)

                                 ccAAAAAGGCGACCAGCGCCCGGCGCACAAACAGCGCGGACTCTGCCGTATAGTCGCGAAAAGAGTTCTGTAGTTTCATCCGCTGCGTTTTCTACTCAAAGCTCCCTTATCACTCACGgtgataagg                                                                                                                                       <  2:824267‑M2/127‑10 (MQ=255)

                                 ccAAAAAGGCGACCAGCGCCCGGCGCACAAACAGCGCGGACTCTGCCGTATAGTCGCGAAAAGAGTTCTGTAGTTTCATCCGCTGCGTTTTCTACTCAAAGCTCCCTTATCACTCACGgtgataagg                                                                                                                                       >  1:824267‑M2/1‑118 (MQ=255)

                                  cAAAAAGGCGACCAGCGCCCGGCGCACAAACAGCGCGGACTCTGCCGTATAGTCGCGAAAAGAGTTCTGTAGTTTCATCCGCTGCGTTTTCTACTCAAAGCTCCCTTATCACcgtgagtgata                                                                                                                                          <  4:672901‑M1/123‑12 (MQ=255)

                                  cAAAAAGGCGACCAGCGCCCGGCGCACAAACAGCGCGGACTCTGCCGTATAGTCGCGAAAAGAGTTCTGTAGTTTCATCCGCTGCGTTTTCTACTCAAAGCTCCCTTATCACcgtgagtgata                                                                                                                                          >  3:672901‑M1/1‑112 (MQ=255)

                                    aaaaGGCGACCAGCGCCCGGCGCACAAACAGCGCGGACTCTGCCGTATAGTCGCGAAAAGAGTTCTGTAGTTTCATCCGCTGCGTTTTCTACTCAAAACTCCCTTATCACTCACGgtgataagg                                                                                                                                       <  2:925772‑M2/124‑10 (MQ=255)

                                          cGACCAGCGCCCGGCGCACAAACAGCGCGGACTCTGCCGTATAGTCGCGAAAAGAGTTCTGTAGTTTCATCCGCTGCGTTTTCTACTCAAAGCTCCCTTATCACTCACGGTGATAAGGATGGTTGGTGGTGATGCTCCACGCCCGGTa                                                                                                         <  4:1013191/148‑1 (MQ=255)

                                               aGCGCCCGGCGCACAAACAGCGCGGACTCTGCCGTATAGTCGCGAAAAGAGTTCTGTAGTTTCATCCGCTGCGTTTTCTACTCAAAGCTCCCTTATCACTCACGGTGATAAGGATGGTtggtg                                                                                                                             <  3:401871/123‑1 (MQ=255)

                                                 cgcCCGGCGCACAAACAGCGCGGACTCTGCCGTATAGTCGCGAAAAGAGTTCTGTAGTTTCATCCGCTGCGTTTTCTACTCAAAGCTCCCTTATCACTCACGGTGATAAGGAtggttg                                                                                                                                >  2:600217/1‑118 (MQ=255)

                                                 cgcCCGGCGCACAAACAGCGCGGACTCTGCCGTATAGTCGCGAAAAGAGTTCTGTAGTTTCATCCGCTGCGTTTTCTACTCAAAGCTCCCTTATCACTCACGGTGATAAGGAtggttg                                                                                                                                <  1:600217/118‑1 (MQ=255)

                                                    ccGGCGCACAAACAGCGCGGACTCTGCCGTATAGTCGCGAAAAGAGTTCTGTAGTTTCATCCGCTGCGTTTTCTACTCAAAGCTCCCTTATCACTCACGGTGATAAGGATGGTTGGTGGTGATGCTCCACGCCCGGTACAg                                                                                                      >  2:985738/1‑141 (MQ=255)

                                                    ccGGCGCACAAACAGCGCGGACTCTGCCGTATAGTCGCGAAAAGAGTTCTGTAGTTTCATCCGCTGCGTTTTCTACTCAAAGCTCCCTTATCACTCACGGTGATAAGGATGGTTGGTGGTGATGCTCCACGCCCGGTACAg                                                                                                      <  1:985738/141‑1 (MQ=255)

                                                     cGGCGCACAAACAGCGCGGACTCTGCCGTATAGTCGCGAAAAGAGTTCTGTAGTTTCATCCGCTGCGTTTTCTACTCAAAGCTCCCTTATCACTCACGgtgataagg                                                                                                                                       >  1:350724‑M2/1‑98 (MQ=255)

                                                      ggCGCACAAACAGCGCGGACTCTGCCGTATAGTCGCGAAAAGAGTTCTGTAGTTTCATCCGCTGCGTTTTCTACTCAAAGCTCCCTTATCACTCACGGTGATAAGGATGGTTGGTGGTGATGCTCCACGCCCGGTACa                                                                                                       <  3:7058/138‑1 (MQ=255)

                                                      ggCGCACAAACAGCGCGGACTCTGCCGTATAGTCGCGAAAAGAGTTCTGTAGTTTCATCCGCTGCGTTTTCTACTCAAAGCTCCCTTATCACTCACGGTGATAAGGATGGTTGGTGGTGATGCTCCACGCCCGGTACa                                                                                                       >  4:7058/1‑138 (MQ=255)

                                                            caAACAGCGCGGACTCTGCCGTATAGTCGCGAAAAGAGTTCTGTAGTTTCATCCGCTGCGTTTTCTACTCAAAGCTCCCTTATCACTCACGGTGATAAGGAtg                                                                                                                                    >  3:927701/1‑103 (MQ=255)

                                                              aaCAGCGCGGACTCTGCCGTATAGTCGCGAAAAGAGTTCTGTAGTTTCATCCGCTGCGTTTTCTACTCAAAGCTCCCTTATCACTCACGGTGATACGGATGGTTGGTGGTGATGCt                                                                                                                     >  2:350935/1‑116 (MQ=255)

                                                              aaCAGCGCGGACTCTGCCGTATAGTCGCGAAAAGAGTTCTGTAGTTTCATCCGCTGCGTTTTCTACTCAAAGCTCCCTTATCACTCACGGTGATAAGGATGGTTGGTGGTGATGcg                                                                                                                     <  1:350935/116‑2 (MQ=255)

                                                                cAGCGCGGTCTCTGCCGTATAGTCGCGAAAAGAGTTCTGTAGTTTCATCCGCTGCGTTTTCTACTCAAAGCTCCCTTATCACTCACGgtg                                                                                                                                             >  1:801207‑M2/1‑87 (MQ=255)

                                                                cAGCGCGGACTCTGCCGTATAGTCGCGAAAAGAGTTCTGTAGTTTCATCCGCTGCGTTTTCTACTCAAAGCTCCCTTATCACTCACGgtg                                                                                                                                             <  2:801207‑M2/90‑4 (MQ=255)

                                                                 aGCGCGGACTCTGCCGTATAGTCGCGAAAAGAGTTCTGTAGTTTCATCCGCTGCGTTTTCTACTCAAAGCTCCCTTATCACcgtgagtgataa                                                                                                                                         >  1:431855‑M1/1‑81 (MQ=255)

                                                                   cgcgGACTCTGCCGTATAGTCGCGAAAAGAGTTCTGTAGTTTCATCCGCCGCGTTTTCTACTCAAAGCTCCCTTATCACTCACGGTGATAAGGATGGTTggtggt                                                                                                                           >  1:271822/1‑105 (MQ=255)

                                                                     cgGACTCTGCCGTATAGTCGCGAAAAGAGTTCTGTAGTTTCATCCGCTGCGTTTTCTACTCAAAGCTCCCTTATCACTCACGGTGATAAGGATGGTTGGTGGTGATGCt                                                                                                                     <  3:881598/109‑1 (MQ=255)

                                                                     cgGACTCTGCCGTATAGTCGCGAAAAGAGTTCTGTAGTTTCATCCGCTGCGTTTTCTACTCAAAGCTCCCTTATCACTCACGGTGATAAGGATGGTTGGTGGTGATGCt                                                                                                                     >  4:881598/1‑109 (MQ=255)

                                                                       gACTCTGCCGTATAGTCGCGAAAAGAGTTCTGTAGTTTCATCCGCTGCGTTTTCTACTCAAAGCTCCCTTATCACTCACGGTGATAAGGATGGTTGGTGGTGATGCTCCACGCCCGGTACAGACTCTCTGCGACCAg                                                                                       >  2:752277/1‑137 (MQ=255)

                                                                       gACTCTGCCGTATAGTCGCGAAAAGAGTTCTGTAGTTTCATCCGCTGCGTTTTCTACTCAAAGCTCCCTTATCACTCACGGTGATAAGGATGGTTGGTGGTGATGCTCCACGCCCGGTACAGACTCTCTGCGACCAg                                                                                       <  1:752277/137‑1 (MQ=255)

                                                                       gACTCTGCCGTATAGTCGCGAAAAGAGTTCTGTAGTTTCATCCGCTGCGTTTTCTACTCAAAGCTCCCTTATCACTCACGGTGATAAGGATGGTTGGTGGTGATGCTCCACGCCCGGTACAGACTCTCTGCGACCAg                                                                                       >  4:471594/1‑137 (MQ=255)

                                                                           ctGCCGTATAGTCGCGAAAAGAGTTCTGTAGTTTCATCCGCTGCGTTTTCTACTCAAAGCTCCCTTATCACTCACGGTGATAAGGATGGTTGGTGGTGAt                                                                                                                        <  3:1128119/100‑1 (MQ=255)

                                                                           ctGCCGTATAGTCGCGAAAAGAGTTCTGTAGTTTCATCCGCTGCGTTTTCTACTCAAAGCTCCCTTATCACTCACGGTGATAAGGATGGTTGGTGGTGAt                                                                                                                        >  4:1128119/1‑100 (MQ=255)

                                                                             gCCGTATAGTCGCGAAAAGAGTTCTGTAGTTTCATCCGCTGCGTTTTCTACTCAAAGCTCCCTTATCACTCACGGTGATAAGGATGGTTGGTGGTGATGCTCCACGCCCGGTACAGACTCTCTGCGACCAGCACGCGAACCAGCGGAt                                                                      >  2:511555/1‑148 (MQ=255)

                                                                                 tataGTCGCGAAAAGAGTTCTGTAGTTTCATCCGCTGCGTTTTCTACTCAAAGCTCCCTTATCACTCACGGTGATAAGGATGGTTGGTGGTGATGCTCCACGCCCGGTACAGACTCTCTGCGACCAGCACGCGAACCAGCgg                                                                        <  4:1127196/142‑1 (MQ=255)

                                                                                   taGTCGCGAAAAGAGTTCTGTAGTTTCATCCGCTGCGTTTTCTACTCAAAGCTCCCTTATCACTCACGGTGATAAGGATGGTTGGTGGTGATGCt                                                                                                                     >  3:790476/1‑95 (MQ=255)

                                                                                    aGTCGCGAAAAGAGTTCTGTAGTTTCATCCGCTGCGTTTTCTACTCAAAGCTCCCTTATCACTCACGGTGATAAGGATGGTTGGTGGTGATGCTCCACGCCCGGTACAGACTCTCTGCGACCAGCACGCGAACCAGCGGATGGGGGAg                                                               <  1:511555/148‑1 (MQ=255)

                                                                                         cgAAAAGAGTTCTGTAGTTTCATCCGCTGCGTTTTCTACTCAAAGCTCCCTTATCACTCACGGTGATAAGGAtggttgg                                                                                                                               <  3:986396/79‑1 (MQ=255)

                                                                                         cgAAAAGAGTTCTGTAGTTTCATCCGCTGCGTTTTCTACTCAAAGCTCCCTTATCACTCACGGTGATAAGGAtggttgg                                                                                                                               >  4:986396/1‑79 (MQ=255)

                                                                                           aaaaGAGTTCTGTAGTTTCATCCGCTGCGTTTTCTACTCAAAGCTCCCTTATCACTCACGGTGATAAGGATGGTTGGTGGTGATGCTCCACGCCCGGTACAGACTCTCTGCGACCAGCACGCGAACCAGCGGATGGGGGAGGGTAAgc                                                        >  1:1109322/1‑148 (MQ=255)

                                                                                            aaaGAGTTCTGTAGTTTCATCCGCTGCGTTTTCTACTCAAAGCTCCCTTATCACTCACGGTGATAAGGATGGTTGGTGGTGATGCTCCACGCCCGGTACAGACTCTCTGCGACCAGCACGCGAACCAGCGGATGGGGGAg                                                               <  2:388266/140‑1 (MQ=255)

                                                                                             aaGAGTTCTGTAGTTTCATCCGCTGCGTTTTCTACTCAAAGCTCCCTTATCACTCACGGTGATAAGGATGGTtggtgg                                                                                                                            <  3:135024/78‑1 (MQ=255)

                                                                                             aaGAGTTCTGTAGTTTCATCCGCTGCGTTTTCTACTCAAAGCTCCCTTATCACTCACGGTGATAAGGATGGTTGGTGGTGATGCTCCACGCCCGGTACAGActctc                                                                                                <  4:891667/106‑1 (MQ=255)

                                                                                             aaGAGTTCTGTAGTTTCATCCGCTGCGTTTTCTACTCAAAGCTCCCTTATCACTCACGGTGATAAGGATGGTTGGTGGTGATGCTCCACGCCCGGTACAGActctc                                                                                                >  3:891667/1‑106 (MQ=255)

                                                                                             aaGAGTTCTGTAGTTTCATCCGCTGCGTTTTCTACTCAAAGCTCCCTTATCACTCACGGTGATAAGGATGGTTGGTGGTGATGCTCCACGCCCGGTACAGACTCTCTGCGACCAGCACGCGAACCAg                                                                           <  2:459556/127‑1 (MQ=255)

                                                                                                     tGTAGTTTCATCCGCTGCGTTTTCTACTCAAAGCTCCCTTATCACTCACGGTGATAAGGATGGTTGGTGGTGATGCTCCACGCCCGGt                                                                                                          >  4:528990/1‑88 (MQ=255)

                                                                                                     tGTAGTTTCATCCGCTGCGTTTTCTACTCAAAGCTCCCTTATCACTCACGGTGATAAGGATGGTTGGTGGTGATGCTCCACGCCCGGt                                                                                                          <  3:528990/88‑1 (MQ=255)

                                                                                                       tAGTTTCATCCGCTGCGTTTTCTACTCAAAGCTCCCTTATCACTCACGGTGATAAGGa                                                                                                                                      <  1:988559/58‑1 (MQ=255)

                                                                                                       tAGTTTCATCCGCTGCGTTTTCTACTCAAAGCTCCCTTATCACTCACGGTGATAAGGa                                                                                                                                      >  2:988559/1‑58 (MQ=255)

                                                                                                       tAGTTTCATCCGCTGCGTTTTCTACTCAAAGCTCCCTTATCACTCACGGTGATAAGGATGGTTGGTGGTGATGCTCCACGCCCGGTACAGACTCTCTGCGACCAGCACGCGAACCAGCGGATGGGGGAGGGTAAGCGCCGACAGCGAc                                            >  1:1018974/1‑148 (MQ=255)

                                                                                                        aGTTTCATCCGCTGCGTTTTCTACTCAAAGCTCCCTTATCACTCACGGTGATAAGGATGGTTGGTGGTGATGCTCCACGCCCGGTACAGACTCTCTGCGACCAGCACGCGAACCAGCGGATGGGGGAGGGTAAGCGCCGACAg                                                >  2:197659/1‑143 (MQ=255)

                                                                                                        aGTTTCATCCGCTGCGTTTTCTACTCAAAGCTCCCTTATCACTCACGGTGATAAGGATGGTTGGTGGTGATGCTCCACGCCCGGTACAGACTCTCTGCGACCAGCACGCGAACCAGCGGATGGGGGAGGGTAAGCGCCGACAg                                                <  1:197659/143‑1 (MQ=255)

                                                                                                           ttCATCCGCTGCGTTTTCTACTCAAAGCTCCCTTATCACcgtgagtgataag                                                                                                                                        <  3:476946‑M1/52‑14 (MQ=255)

                                                                                                           ttCATCCGCTGCGTTTTCTACTCAAAGCTCCCTTATCACcgtgagtgataag                                                                                                                                        >  4:476946‑M1/1‑39 (MQ=255)

                                                                                                           ttCATCCGCTGCGTTTTCTACTCAAAGCTCCCTTATCACTCACGGTGATAAGGATGGTTGGTGGTGATGCTCCACGCCCGGTACAGACTCTCTGCGACCAGCACGCGAACCAg                                                                           >  1:663978/1‑113 (MQ=255)

                                                                                                           ttCATCCGCTGCGTTTTCTACTCAAAGCTCCCTTATCACTCACGGTGATAAGGATGGTTGGTGGTGATGCTCCACGCCCGGTACAGACTCTCTGCGACCAGCACGCGAACCAGCGGATGGGGGAGGGTAAGCGCCGACAGCGa                                             >  3:134557/1‑143 (MQ=255)

                                                                                                           ttCATCCGCTGCGTTTTCTACTCAAAGCTCCCTTATCACTCACGGTGATAAGGATGGTTGGTGGTGATGCTCCACGCCCGGTACAGACTCTCTGCGACCAGCACGCGAACCAGCGGATGGGGGAGGGTAAGCGCCGACAGCGa                                             <  4:134557/143‑1 (MQ=255)

                                                                                                                ccGCTGCGTTTTCTACTCAAAGCTCCCTTATCACcgtgagtgataa                                                                                                                                         >  4:247280‑M1/1‑34 (MQ=255)

                                                                                                                ccGCTGCGTTTTCTACTCAAAGCTCCCTTATCACcgtgagtgataa                                                                                                                                         <  3:247280‑M1/46‑13 (MQ=255)

                                                                                                                ccGCTGCGTTTTCTACTCAAAGCTCCCTTATCACTCACGGTGATAAGGATGGTTggtggt                                                                                                                           >  4:689805/1‑60 (MQ=255)

                                                                                                                ccGCTGCGTTTTCTACTCAAAGCTCCCTTATCACTCACGGTGATAAGGATGGTTGGTGGTGATGCTCCACGCCCGGTACAGACTCTCTGCGACCAGCACGCGAACCAg                                                                           <  1:1036687/108‑1 (MQ=255)

                                                                                                                ccGCTGCGTTTTCTACTCAAAGCTCCCTTATCACTCACGGTGATAAGGATGGTTGGTGGTGATGCTCCACGCCCGGTACAGACTCTCTGCGACCAGCACGCGAACCAg                                                                           >  2:1036687/1‑108 (MQ=255)

                                                                                                                ccGCTGCGTTTTCTACTCAAAGCTCCCTTATCACTCACGGTGATAAGGATGGTTGGTGGTGATGCTCCACGCCCGGTACAGACTCTCTGCGACCAGCACGCGAACCAGCGGATg                                                                     <  4:72168/114‑1 (MQ=255)

                                                                                                                ccGCTGCGTTTTCTACTCAAAGCTCCCTTATCACTCACGGTGATAAGGATGGTTGGTGGTGATGCTCCACGCCCGGTACAGACTCTCTGCGACCAGCACGCGAACCAGCGGATg                                                                     >  3:72168/1‑114 (MQ=255)

                                                                                                                ccGCTGCGTTTTCTACTCAAAGCTCCCTTATCACTCACGGTGATAAGGATGGTTGGTGGTGATGCTCCACGCCCGGTACAGACTCTCTGCGACCAGCACGCGAACCAGCGGATGGGGGAGGGt                                                            <  4:521095/123‑1 (MQ=255)

                                                                                                                    tGCGTTTTCTACTCAAAGCTCCCTTATCACTCACGGTGATAAGGATGGTTGGTGGTGATGCTCCACGCCCGGTACAGACTCTCTGCGACCAGCACGCGAACCAGCGGATGGGGGAg                                                               <  4:880864/116‑1 (MQ=255)

                                                                                                                      cGTTTTCTACTCAAAGCTCCCTTATCACTCACGGTGATAAGGATGGTTGGTGGTGATGCTCCACGCCCGGTACAGACTCTCTGCGACCAGCACGCGAACCAGCGGATggg                                                                   <  2:562272/110‑1 (MQ=255)

                                                                                                                         tttCTACTCAAAGCTCCCTTATCACTCACGGTGATAAGGATGGTTGGTGGTGATGCTCCACGCCCGGTACAGACTCTCTGCGACCAGCACGCGAAcc                                                                             >  2:253157/1‑97 (MQ=255)

                                                                                                                         tttCTACTCAAAGCTCCCTTATCACTCACGGTGATAAGGATGGTTGGTGGTGATGCTCCACGCCCGGTACAGACTCTCTGCGACCAGCACGCGAAcc                                                                             <  1:253157/97‑1 (MQ=255)

                                                                                                                              aCTCAAAGCTCCCTTATCACTCACGGTGATAAGGATGGTTGGTGGTGATGCTCCACGCCCGGTACAGACTCTCTGCGACCAGCACGCGAACCAGCGGATggggg                                                                 <  2:669783/104‑1 (MQ=255)

                                                                                                                              aCTCAAAGCTCCCTTATCACTCACGGTGATAAGGATGGTTGGTGGTGATGCTCCACGCCCGGTACAGACTCTCTGCGACCAGCACGCGAACCAGCGGATggggg                                                                 >  1:669783/1‑104 (MQ=255)

                                                                                                                                tCAAAGCTCCCTTATCACTCACGGTGATAAGGATGGTTGGTGGTGATGCTCCACGCCCGGTACAGa                                                                                                     >  4:215381/1‑66 (MQ=255)

                                                                                                                                  aaaGCTCCCTTATCACTCACGGTGATAAGGATGGTtggtg                                                                                                                             >  2:692182/1‑40 (MQ=255)

                                                                                                                                   aaGCTCCCTTATCACTCACGGTGATAAGGATGGTTGGTGGTGATGCTCCACGCCCGGTACAGACTCTCTGCGACCAGCACGCGAACCAGCGGATggggg                                                                 >  4:92827/1‑99 (MQ=255)

                                                                                                                                      cTCCCTTATCACTCACGGTGATAAGGATGGTTGGTGGTGATGCTCCACGCCCGGTACAGACTCTCTGCGACCAGCACGCGAACCAGCGGATGGGGGAGGGTAAGCGCCGACAGCGACCAGCTCTGCTCAGCCGCCGCTTTAcaggcag             <  2:1018974/148‑1 (MQ=255)

                                                                                                                                         ccTTATCACcgtgagtgataagggagttttgagtagaaaacgcagcggatgaaactacagaactcttttcgcgactatacggcagagtccgcgctgtttgtgcgccgggcgctggtcgcctttt                                  <  2:925772‑M1/124‑116 (MQ=255)

                                                                                                                                         ccTTATCACcgtgagtgataagggagctttgagtagaaaacgcagcggatgaaactacagaactcttttcgcgactatacggcagagtccgcgctgtttgtgcgccgggcgctggtcgcctttttgg                               <  2:824267‑M1/127‑119 (MQ=255)

                                                                                                                                         ccTTATCACcgtgagtgataagggagctttgagtagaaaacgcagcggatgaaactacagaactcttttcgcgactatacggcagagtccgcgctgtttgtgcgccgggcgctggtcgcctttt                                  >  1:925772‑M1/1‑9 (MQ=255)

                                                                                                                                         ccTTATCACcgtgagtgataagggagctttgagtagaaaacgcagcggatgaaactacagaactcttttcgcgactatacggcagagtccgcgctgtttgtgcgccg                                                   >  1:350724‑M1/1‑9 (MQ=255)

                                                                                                                                         ccTTATCACcgtgagtgataagggagctttgagtagaaaacgcagcggatgaaactacagaactcttttcgcgactatacggcagagtccgcgctgtttgtgcgccg                                                   <  2:350724‑M1/107‑99 (MQ=255)

                                                                                                                                          cTTATCACTCACGgtgataagggagctttgagtagaaaacgcagcggatgaa                                                                                                         <  3:476946‑M2/52‑40 (MQ=255)

                                                                                                                                          cTTATCACTCACGgtgataagggagctttgagtagaaaacgcagcggatgaa                                                                                                         >  4:476946‑M2/1‑13 (MQ=255)

                                                                                                                                          cTTATCACTCACGGTGATAAGGGTGGTTGGTGGTGATGCTCCACGCCCGGTACAGACTCTCTGCGACCAGCACGCGACCCAGCGGATGGGGGAGGGTAAGCGCCGACAGCGACCAGCTCTGCTCAGCCGCCGCTTTAcaggca              <  4:988884/143‑1 (MQ=255)

                                                                                                                                          cTTATCACTCACGGTGATAAGGGTGGTTGGTGGTGATGCTCCACGCCCGGTACAGACTCTCTGCGACCAGCACGCGAACCAGCGGATGGGGGAGGGTAAGCGCCGACAGCGACCAGCTCTGCTCAGCCGCCGCTTTGcaggca              >  3:988884/1‑143 (MQ=255)

                                                                                                                                          cTTATCACTCACGGTGATAAGGATGGTTGGTGGTGATGCTCCACGCCCGGTACAGACTCTCTGCGACCAGCACGCGAACCAGCGGATg                                                                     <  1:289713/88‑1 (MQ=255)

                                                                                                                                          cTTATCACTCACGGTGATAAGGATGGTTGGTGGTGATGCTCCACGCCCGGTACAGACTCTCTGCGACCAGCACGCGAACCAGCGGATg                                                                     >  2:289713/1‑88 (MQ=255)

                                                                                                                                           ttATCACTCACGgtgataagggagctttgagtagaaaacgcagcggatgaaactacagaactcttttcgcgactatacggcagagtccgcgct                                                               <  2:431855‑M2/93‑82 (MQ=255)

                                                                                                                                           ttATCACTCACGgtgataagggagctttgagtagaaaacgcagcggatgaaactacagaactcttttcgcgactatacggcagagtccgcgct                                                               >  1:431855‑M2/1‑12 (MQ=255)

                                                                                                                                           ttATCACTCACGgtgataagggagctttgagtagaaaacgcagcgg                                                                                                              >  4:247280‑M2/1‑12 (MQ=255)

                                                                                                                                           ttATCACTCACGgtgataagggagctttgagtagaaaacgcagcgg                                                                                                              <  3:247280‑M2/46‑35 (MQ=255)

                                                                                                                                           ttATCACTCACGGTGATAAGGATGGTTGGTGGTGATGCTCCACGCCCGGTACAGACTCTCTGCGACCAGCACGCGAACCAGCGGATGGGGGAg                                                               <  1:853941/93‑1 (MQ=255)

                                                                                                                                            tATCACTCACGgtgataagggagctttgagtagaaaacgcagcggatgaaactacagaactcttttcgcgactatacggcagagtccgcgctgtttgtgcgccgggcgctggtcgcctttttg                                >  3:672901‑M2/1‑11 (MQ=255)

                                                                                                                                              tcactcacGGTGATAAGGATGGTTGGTGGTGATGCTCCACGCCCGGTACAGACTCTCTGCGACCAGCACGCGAACCAGCGGATggg                                                                   <  2:2097/86‑1 (MQ=255)

                                                                                                                                              tcactcacGGTGATAAGGATGGTTGGTGGTGATGCTCCACGCCCGGTACAGACTCTCTGCGACCAGCACGCGAACCAGCGGATGGGGGAGGGTAAg                                                         >  3:498489/1‑96 (MQ=255)

                                                                                                                                               cACcgtgagtgataagggagctttgagtagaaaacgcagcggatgaaactacagaactcttttcgcgactatacggcagagaccgcgctg                                                              >  1:801207‑M1/1‑3 (MQ=255)

                                                                                                                                                 ctcacGGTGATAAGGATGGTTGGTGGTGATGCTCCACGCCCGGTACAGACTCTCTGCGACCAGCACGCGAACCAGCGGATGGGGGAGGGTAAGCGCCGACAGCGACCAGCTCTGCTCAGCCGCCGCTTTACAGGCAGGCGACAACCCt  <  2:311064/148‑1 (MQ=255)

                                                                                                                                                 ccgtgagtgataagggagctttgagtagaaaacgcagcggatgaaactacagaactcttttcgcgactatacggcagagtccgcgctgtttgtgcgccgggcgctggtcgcctttttggggattttgctgctgaccggcgtg        >  4:1032969‑M1/1‑1 (MQ=255)

                                                                                                                                                 ccgtgagtgataagggagctttgagtagaaaacgcagcggatgaaactacagaactcttttcgcgactatacggcagagtccgcgctgtttgtgcgccgggcgctggtcgcctttttggggattttgctgctgaccggcgtg        <  3:1032969‑M1/142‑142 (MQ=255)

                                                                                                                                                 ccgtgagtgataagggagctttgagtagaaaacgcagcggatgaaactacagaactcttttcgcgactatacggcagagtccgcgctgtttgtgcgccgggcgctggtcgcctttttggggatt                          <  1:509758‑M1/124‑124 (MQ=255)

                                                                                                                                                 ccgtgagtgataagggagctttgagtagaaaacgcagcggatgaaactacagaactcttttcgcgactatacggcagagtccgcgctgtttgtgcgccgggcgctggtcgcctttttggggatt                          >  2:509758‑M1/1‑1 (MQ=255)

TGGCGATAAGCACGCCGGTCAGCAGCAAAATCCCCAAAAAGGCGACCAGCGCCCGGCGCACAAACAGCGCGGACTCTGCCGTATAGTCGCGAAAAGAGTTCTGTAGTTTCATCCGCTGCGTTTTCTACTCAAAGCTCCCTTATCACTCACGGTGATAAGGATGGTTGGTGGTGATGCTCCACGCCCGGTACAGACTCTCTGCGACCAGCACGCGAACCAGCGGATGGGGGAGGGTAAGCGCCGACAGCGACCAGCTCTGCTCAGCCGCCGCTTTACAGGCAGGCGACAACCCT  >  NC_000913/668106‑668398

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 16 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 38 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.