BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 668251	83 (0.890)	8 (0.090)	7/182	NT	9.1%	coding (465/468 nt)	rlmH	23S rRNA m(3)Psi1915 pseudouridine methyltransferase, SAM‑dependent
*	?	NC_000913	= 668256	84 (0.990)	8 (0.090)	7/182	NT	9.1%	coding (460/468 nt)	rlmH	23S rRNA m(3)Psi1915 pseudouridine methyltransferase, SAM‑dependent

Only 100 of 122 total aligned reads displayed.

AAGCACGCCGGTCAGCAGCAAAATCCCCAAAAAGGCGACCAGCGCCCGGCGCACAAACAGCGCGGACTCTGCCGTATAGTCGCGAAAAGAGTTCTGTAGTTTCATCCGCTGCGTTTTCTACTCAAAGCTCCCTTATCACTCACGGTGATAAGGATGGTTGGTGGTGATGCTCCACGCCCGGTACAGACTCTCTGCGACCAGCACGCGAACCAGCGGATGGGGGAGGGTAAGCGCCGACAGCGACCAGCTCTGCTCAGCCGCCGCTTTACAGGCAGGCGACAACCCTTC  >  NC_000913/668113‑668400

aaGCACGCCGGTCAGCAGCAAAATCCCCAAAAAGGCGACCAGCGCCCGGCGCACAAACAGCGCGGACTCTGCCGTATAGTCGCGAAAAGAGTTCTGTAGTTTCATCCGCTGCGTTTTCTACTCAAAGCTCCCTTATCACTCACGgtga                                                                                                                                              <  3:1013191‑M2/148‑5 (MQ=255)

   cACGCCGGTCAGCAGCAAAATCCCCAAAAAGGCGACCAGCGCCCGGCGCACAAACAGCGCGGACTCTGCCGTATAGTCGCGAAAAGAGTTCTGTAGTTTCATCCGCTGCGTTTTCTACTCAAAGCTCCCTTATCACTCACGg                                                                                                                                                 >  4:1032969‑M2/1‑141 (MQ=255)

   cACGCCGGTCAGCAGCAAAATCCCCAAAAAGGCGACCAGCGCCCGGCGCACAAACAGCGCGGACTCTGCCGTATAGTCGCGAAAAGAGTTCTGTAGTTTCATCCGCTGCGTTTTCTACTCAAAGCTCCCTTATCACTCACGg                                                                                                                                                 <  3:1032969‑M2/142‑2 (MQ=255)

      gCCGGTCAGCAGCAAAATCCCCAAAAAGGCGACCAGCGCCCGGCGCACAAACAGCGCGGACTCTGCCGTATAGTCGCGAAAAGAGTTCTGTAGTTTCATCCGCTGCGTTTTCTACTCAAAGCTCCCTTATCACTCACGGTGATAAGGa                                                                                                                                        <  1:431784/148‑1 (MQ=255)

                     aaTCCCCAAAAAGGCGACCAGCGCCCGGCGCACAAACAGCGCGGACTCTGCCGTATAGTCGCGAAAAGAGTTCTGTAGTTTCATCCGCTGCGTTTTCTACTCAAAGCTCCCTTATCACTCACGg                                                                                                                                                 >  2:509758‑M2/1‑123 (MQ=255)

                     aaTCCCCAAAAAGGCGACCAGCGCCCGGCGCACAAACAGCGCGGACTCTGCCGTATAGTCGCGAAAAGAGTTCTGTAGTTTCATCCGCTGCGTTTTCTACTCAAAGCTCCCTTATCACTCACGg                                                                                                                                                 <  1:509758‑M2/124‑2 (MQ=255)

                          ccAAAAAGGCGACCAGCGCCCGGCGCACAAACAGCGCGGACTCTGCCGTATAGTCGCGAAAAGAGTTCTGTAGTTTCATCCGCTGCGTTTTCTACTCAAAGCTCCCTTATCACTCACGgtgataagg                                                                                                                                         <  2:824267‑M2/127‑10 (MQ=255)

                             aaaaGGCGACCAGCGCCCGGCGCACAAACAGCGCGGACTCTGCCGTATAGTCGCGAAAAGAGTTCTGTAGTTTCATCCGCTGCGTTTTCTACTCAAAGCTCCCTTATCACTCACGgtgataagg                                                                                                                                         >  1:925772‑M2/1‑115 (MQ=255)

                             aaaaGGCGACCAGCGCCCGGCGCACAAACAGCGCGGACTCTGCCGTATAGTCGCGAAAAGAGTTCTGTAGTTTCATCCGCTGCGTTTTCTACTCAAAACTCCCTTATCACTCACGgtgataagg                                                                                                                                         <  2:925772‑M2/124‑10 (MQ=255)

                                   cGACCAGCGCCCGGCGCACAAACAGCGCGGACTCTGCCGTATAGTCGCGAAAAGAGTTCTGTAGTTTCATCCGCTGCGTTTTCTACTCAAAGCTCCCTTATCACTCACGGTGATAAGGATGGTTGGTGGTGATGCTCCACGCCCGGTa                                                                                                           <  4:1013191/148‑1 (MQ=255)

                                        aGCGCCCGGCGCACAAACAGCGCGGACTCTGCCGTATAGTCGCGAAAAGAGTTCTGTAGTTTCATCCGCTGCGTTTTCTACTCAAAGCTCCCTTATCACTCACGGTGATAAGGATGGTtggtg                                                                                                                               >  4:401871/1‑123 (MQ=255)

                                          cgcCCGGCGCACAAACAGCGCGGACTCTGCCGTATAGTCGCGAAAAGAGTTCTGTAGTTTCATCCGCTGCGTTTTCTACTCAAAGCTCCCTTATCACTCACGGTGATAAGGAtggttg                                                                                                                                  <  1:600217/118‑1 (MQ=255)

                                          cgcCCGGCGCACAAACAGCGCGGACTCTGCCGTATAGTCGCGAAAAGAGTTCTGTAGTTTCATCCGCTGCGTTTTCTACTCAAAGCTCCCTTATCACTCACGGTGATAAGGAtggttg                                                                                                                                  >  2:600217/1‑118 (MQ=255)

                                             ccGGCGCACAAACAGCGCGGACTCTGCCGTATAGTCGCGAAAAGAGTTCTGTAGTTTCATCCGCTGCGTTTTCTACTCAAAGCTCCCTTATCACTCACGGTGATAAGGATGGTTGGTGGTGATGCTCCACGCCCGGTACAg                                                                                                        <  1:985738/141‑1 (MQ=255)

                                              cGGCGCACAAACAGCGCGGACTCTGCCGTATAGTCGCGAAAAGAGTTCTGTAGTTTCATCCGCTGCGTTTTCTACTCAAAGCTCCCTTATCACTCACGgtgataagg                                                                                                                                         <  2:350724‑M2/107‑10 (MQ=255)

                                               ggCGCACAAACAGCGCGGACTCTGCCGTATAGTCGCGAAAAGAGTTCTGTAGTTTCATCCGCTGCGTTTTCTACTCAAAGCTCCCTTATCACTCACGGTGATAAGGATGGTTGGTGGTGATGCTCCACGCCCGGTACa                                                                                                         <  3:7058/138‑1 (MQ=255)

                                                     caAACAGCGCGGACTCTGCCGTATAGTCGCGAAAAGAGTTCTGTAGTTTCATCCGCTGCGTTTTCTACTCAAAGCTCCCTTATCACTCACGGTGATAAGGAtg                                                                                                                                      >  3:927701/1‑103 (MQ=255)

                                                       aaCAGCGCGGACTCTGCCGTATAGTCGCGAAAAGAGTTCTGTAGTTTCATCCGCTGCGTTTTCTACTCAAAGCTCCCTTATCACTCACGGTGATACGGATGGTTGGTGGTGATGCt                                                                                                                       >  2:350935/1‑116 (MQ=255)

                                                       aaCAGCGCGGACTCTGCCGTATAGTCGCGAAAAGAGTTCTGTAGTTTCATCCGCTGCGTTTTCTACTCAAAGCTCCCTTATCACTCACGGTGATAAGGATGGTTGGTGGTGATGcg                                                                                                                       <  1:350935/116‑2 (MQ=255)

                                                         cAGCGCGGTCTCTGCCGTATAGTCGCGAAAAGAGTTCTGTAGTTTCATCCGCTGCGTTTTCTACTCAAAGCTCCCTTATCACTCACGgtg                                                                                                                                               >  1:801207‑M2/1‑87 (MQ=255)

                                                         cAGCGCGGACTCTGCCGTATAGTCGCGAAAAGAGTTCTGTAGTTTCATCCGCTGCGTTTTCTACTCAAAGCTCCCTTATCACTCACGgtg                                                                                                                                               <  2:801207‑M2/90‑4 (MQ=255)

                                                            cgcgGACTCTGCCGTATAGTCGCGAAAAGAGTTCTGTAGTTTCATCCGCCGCGTTTTCTACTCAAAGCTCCCTTATCACTCACGGTGATAAGGATGGTTggtggt                                                                                                                             >  1:271822/1‑105 (MQ=255)

                                                            cgcgGACTCTGCCGTATAGTCGCGAAAAGAGTTCTGTAGTTTCATCCGCCGCGTTTTCTACTCAAAGCTCCCTTATCACTCACGGTGATAAGGATGGTTggtggt                                                                                                                             <  2:271822/105‑1 (MQ=255)

                                                              cgGACTCTGCCGTATAGTCGCGAAAAGAGTTCTGTAGTTTCATCCGCTGCGTTTTCTACTCAAAGCTCCCTTATCACTCACGGTGATAAGGATGGTTGGTGGTGATGCt                                                                                                                       >  4:881598/1‑109 (MQ=255)

                                                              cgGACTCTGCCGTATAGTCGCGAAAAGAGTTCTGTAGTTTCATCCGCTGCGTTTTCTACTCAAAGCTCCCTTATCACTCACGGTGATAAGGATGGTTGGTGGTGATGCt                                                                                                                       <  3:881598/109‑1 (MQ=255)

                                                                gACTCTGCCGTATAGTCGCGAAAAGAGTTCTGTAGTTTCATCCGCTGCGTTTTCTACTCAAAGCTCCCTTATCACTCACGGTGATAAGGATGGTTGGTGGTGATGCTCCACGCCCGGTACAGACTCTCTGCGACCAg                                                                                         >  4:471594/1‑137 (MQ=255)

                                                                gACTCTGCCGTATAGTCGCGAAAAGAGTTCTGTAGTTTCATCCGCTGCGTTTTCTACTCAAAGCTCCCTTATCACTCACGGTGATAAGGATGGTTGGTGGTGATGCTCCACGCCCGGTACAGACTCTCTGCGACCAg                                                                                         <  1:752277/137‑1 (MQ=255)

                                                                gACTCTGCCGTATAGTCGCGAAAAGAGTTCTGTAGTTTCATCCGCTGCGTTTTCTACTCAAAGCTCCCTTATCACTCACGGTGATAAGGATGGTTGGTGGTGATGCTCCACGCCCGGTACAGACTCTCTGCGACCAg                                                                                         >  2:752277/1‑137 (MQ=255)

                                                                gACTCTGCCGTATAGTCGCGAAAAGAGTTCTGTAGTTTCATCCGCTGCGTTTTCTACTCAAAGCTCCCTTATCACTCACGGTGATAAGGATGGTTGGTGGTGATGCTCCACGCCCGGTACAGACTCTCTGCGACCAg                                                                                         <  3:471594/137‑1 (MQ=255)

                                                                    ctGCCGTATAGTCGCGAAAAGAGTTCTGTAGTTTCATCCGCTGCGTTTTCTACTCAAAGCTCCCTTATCACTCACGGTGATAAGGATGGTTGGTGGTGAt                                                                                                                          >  4:1128119/1‑100 (MQ=255)

                                                                      gCCGTATAGTCGCGAAAAGAGTTCTGTAGTTTCATCCGCTGCGTTTTCTACTCAAAGCTCCCTTATCACTCACGGTGATAAGGATGGTTGGTGGTGATGCTCCACGCCCGGTACAGACTCTCTGCGACCAGCACGCGAACCAGCGGAt                                                                        >  2:511555/1‑148 (MQ=255)

                                                                          tataGTCGCGAAAAGAGTTCTGTAGTTTCATCCGCTGCGTTTTCTACTCAAAGCTCCCTTATCACTCACGGTGATAAGGATGGTTGGTGGTGATGCTCCACGCCCGGTACAGACTCTCTGCGACCAGCACGCGAACCAGCgg                                                                          >  3:1127196/1‑142 (MQ=255)

                                                                            taGTCGCGAAAAGAGTTCTGTAGTTTCATCCGCTGCGTTTTCTACTCAAAGCTCCCTTATCACTCACGGTGATAAGGATGGTTGGTGGTGATGCt                                                                                                                       <  4:790476/95‑1 (MQ=255)

                                                                            taGTCGCGAAAAGAGTTCTGTAGTTTCATCCGCTGCGTTTTCTACTCAAAGCTCCCTTATCACTCACGGTGATAAGGATGGTTGGTGGTGATGCt                                                                                                                       >  3:790476/1‑95 (MQ=255)

                                                                             aGTCGCGAAAAGAGTTCTGTAGTTTCATCCGCTGCGTTTTCTACTCAAAGCTCCCTTATCACTCACGGTGATAAGGATGGTTGGTGGTGATGCTCCACGCCCGGTACAGACTCTCTGCGACCAGCACGCGAACCAGCGGATGGGGGAg                                                                 <  1:511555/148‑1 (MQ=255)

                                                                                  cgAAAAGAGTTCTGTAGTTTCATCCGCTGCGTTTTCTACTCAAAGCTCCCTTATCACTCACGGTGATAAGGAtggttgg                                                                                                                                 <  3:986396/79‑1 (MQ=255)

                                                                                  cgAAAAGAGTTCTGTAGTTTCATCCGCTGCGTTTTCTACTCAAAGCTCCCTTATCACTCACGGTGATAAGGAtggttgg                                                                                                                                 >  4:986396/1‑79 (MQ=255)

                                                                                    aaaaGAGTTCTGTAGTTTCATCCGCTGCGTTTTCTACTCAAAGCTCCCTTATCACTCACGGTGATAAGGATGGTTGGTGGTGATGCTCCACGCCCGGTACAGACTCTCTGCGACCAGCACGCGAACCAGCGGATGGGGGAGGGTAAgc                                                          >  1:1109322/1‑148 (MQ=255)

                                                                                     aaaGAGTTCTGTAGTTTCATCCGCTGCGTTTTCTACTCAAAGCTCCCTTATCACTCACGGTGATAAGGATGGTTGGTGGTGATGCTCCACGCCCGGTACAGACTCTCTGCGACCAGCACGCGAACCAGCGGATGGGGGAg                                                                 >  1:388266/1‑140 (MQ=255)

                                                                                      aaGAGTTCTGTAGTTTCATCCGCTGCGTTTTCTACTCAAAGCTCCCTTATCACTCACGGTGATAAGGATGGTtggtgg                                                                                                                              >  4:135024/1‑78 (MQ=255)

                                                                                      aaGAGTTCTGTAGTTTCATCCGCTGCGTTTTCTACTCAAAGCTCCCTTATCACTCACGGTGATAAGGATGGTtggtgg                                                                                                                              <  3:135024/78‑1 (MQ=255)

                                                                                      aaGAGTTCTGTAGTTTCATCCGCTGCGTTTTCTACTCAAAGCTCCCTTATCACTCACGGTGATAAGGATGGTTGGTGGTGATGCTCCACGCCCGGTACAGActctc                                                                                                  >  3:891667/1‑106 (MQ=255)

                                                                                      aaGAGTTCTGTAGTTTCATCCGCTGCGTTTTCTACTCAAAGCTCCCTTATCACTCACGGTGATAAGGATGGTTGGTGGTGATGCTCCACGCCCGGTACAGActctc                                                                                                  <  4:891667/106‑1 (MQ=255)

                                                                                      aaGAGTTCTGTAGTTTCATCCGCTGCGTTTTCTACTCAAAGCTCCCTTATCACTCACGGTGATAAGGATGGTTGGTGGTGATGCTCCACGCCCGGTACAGACTCTCTGCGACCAGCACGCGAACCAg                                                                             <  2:459556/127‑1 (MQ=255)

                                                                                              tGTAGTTTCATCCGCTGCGTTTTCTACTCAAAGCTCCCTTATCACTCACGGTGATAAGGATGGTTGGTGGTGATGCTCCACGCCCGGt                                                                                                            >  4:528990/1‑88 (MQ=255)

                                                                                                tAGTTTCATCCGCTGCGTTTTCTACTCAAAGCTCCCTTATCACTCACGGTGATAAGGa                                                                                                                                        <  1:988559/58‑1 (MQ=255)

                                                                                                tAGTTTCATCCGCTGCGTTTTCTACTCAAAGCTCCCTTATCACTCACGGTGATAAGGa                                                                                                                                        >  2:988559/1‑58 (MQ=255)

                                                                                                tAGTTTCATCCGCTGCGTTTTCTACTCAAAGCTCCCTTATCACTCACGGTGATAAGGATGGTTGGTGGTGATGCTCCACGCCCGGTACAGACTCTCTGCGACCAGCACGCGAACCAGCGGATGGGGGAGGGTAAGCGCCGACAGCGAc                                              >  1:1018974/1‑148 (MQ=255)

                                                                                                tAGTTTCATCCGCTGCGTTTTCTACTCAAAGCTCCCTTATCACTCACGGTGATAAGGATGGTTGGTGGTGATGCTCCACGCCCGGTACAGACTCTCTGCGACCAGCACGCGAACCAGCGGATGGGGGAGGGTAAGCGCCGACAGCGAc                                              >  1:311064/1‑148 (MQ=255)

                                                                                                 aGTTTCATCCGCTGCGTTTTCTACTCAAAGCTCCCTTATCACTCACGGTGATAAGGATGGTTGGTGGTGATGCTCCACGCCCGGTACAGACTCTCTGCGACCAGCACGCGAACCAGCGGATGGGGGAGGGTAAGCGCCGACAg                                                  >  2:197659/1‑143 (MQ=255)

                                                                                                 aGTTTCATCCGCTGCGTTTTCTACTCAAAGCTCCCTTATCACTCACGGTGATAAGGATGGTTGGTGGTGATGCTCCACGCCCGGTACAGACTCTCTGCGACCAGCACGCGAACCAGCGGATGGGGGAGGGTAAGCGCCGACAg                                                  <  1:197659/143‑1 (MQ=255)

                                                                                                    ttCATCCGCTGCGTTTTCTACTCAAAGCTCCCTTATCACTCACGGTGATAAGGATGGTTGGTGGTGATGCTCCACGCCCGGTACAGACTCTCTGCGACCAGCACGCGAACCAg                                                                             <  2:663978/113‑1 (MQ=255)

                                                                                                    ttCATCCGCTGCGTTTTCTACTCAAAGCTCCCTTATCACTCACGGTGATAAGGATGGTTGGTGGTGATGCTCCACGCCCGGTACAGACTCTCTGCGACCAGCACGCGAACCAg                                                                             >  1:663978/1‑113 (MQ=255)

                                                                                                    ttCATCCGCTGCGTTTTCTACTCAAAGCTCCCTTATCACTCACGGTGATAAGGATGGTTGGTGGTGATGCTCCACGCCCGGTACAGACTCTCTGCGACCAGCACGCGAACCAGCGGATGGGGGAGGGTAAGCGCCGACAGCGa                                               <  4:134557/143‑1 (MQ=255)

                                                                                                    ttCATCCGCTGCGTTTTCTACTCAAAGCTCCCTTATCACTCACGGTGATAAGGATGGTTGGTGGTGATGCTCCACGCCCGGTACAGACTCTCTGCGACCAGCACGCGAACCAGCGGATGGGGGAGGGTAAGCGCCGACAGCGa                                               >  3:134557/1‑143 (MQ=255)

                                                                                                         ccGCTGCGTTTTCTACTCAAAGCTCCCTTATCACTCACGGTGATAAGGATGGTTggtggt                                                                                                                             >  4:689805/1‑60 (MQ=255)

                                                                                                         ccGCTGCGTTTTCTACTCAAAGCTCCCTTATCACTCACGGTGATAAGGATGGTTggtggt                                                                                                                             <  3:689805/60‑1 (MQ=255)

                                                                                                         ccGCTGCGTTTTCTACTCAAAGCTCCCTTATCACTCACGGTGATAAGGATGGTTGGTGGTGATGCTCCACGCCCGGTACAGACTCTCTGCGACCAGCACGCGAACCAg                                                                             <  1:1036687/108‑1 (MQ=255)

                                                                                                         ccGCTGCGTTTTCTACTCAAAGCTCCCTTATCACTCACGGTGATAAGGATGGTTGGTGGTGATGCTCCACGCCCGGTACAGACTCTCTGCGACCAGCACGCGAACCAGCGGATg                                                                       <  4:72168/114‑1 (MQ=255)

                                                                                                         ccGCTGCGTTTTCTACTCAAAGCTCCCTTATCACTCACGGTGATAAGGATGGTTGGTGGTGATGCTCCACGCCCGGTACAGACTCTCTGCGACCAGCACGCGAACCAGCGGATg                                                                       >  3:72168/1‑114 (MQ=255)

                                                                                                         ccGCTGCGTTTTCTACTCAAAGCTCCCTTATCACTCACGGTGATAAGGATGGTTGGTGGTGATGCTCCACGCCCGGTACAGACTCTCTGCGACCAGCACGCGAACCAGCGGATGGGGGAGGGt                                                              <  4:521095/123‑1 (MQ=255)

                                                                                                         ccGCTGCGTTTTCTACTCAAAGCTCCCTTATCACTCACGGTGATAAGGATGGTTGGTGGTGATGCTCCACGCCCGGTACAGACTCTCTGCGACCAGCACGCGAACCAGCGGATGGGGGAGGGt                                                              >  3:521095/1‑123 (MQ=255)

                                                                                                             tGCGTTTTCTACTCAAAGCTCCCTTATCACTCACGGTGATAAGGATGGTTGGTGGTGATGCTCCACGCCCGGTACAGACTCTCTGCGACCAGCACGCGAACCAGCGGATGGGGGAg                                                                 <  4:880864/116‑1 (MQ=255)

                                                                                                               cGTTTTCTACTCAAAGCTCCCTTATCACTCACGGTGATAAGGATGGTTGGTGGTGATGCTCCACGCCCGGTACAGACTCTCTGCGACCAGCACGCGAACCAGCGGATggg                                                                     >  1:562272/1‑110 (MQ=255)

                                                                                                                  tttCTACTCAAAGCTCCCTTATCACTCACGGTGATAAGGATGGTTGGTGGTGATGCTCCACGCCCGGTACAGACTCTCTGCGACCAGCACGCGAAcc                                                                               <  1:253157/97‑1 (MQ=255)

                                                                                                                       aCTCAAAGCTCCCTTATCACTCACGGTGATAAGGATGGTTGGTGGTGATGCTCCACGCCCGGTACAGACTCTCTGCGACCAGCACGCGAACCAGCGGATggggg                                                                   <  2:669783/104‑1 (MQ=255)

                                                                                                                         tCAAAGCTCCCTTATCACTCACGGTGATAAGGATGGTTGGTGGTGATGCTCCACGCCCGGTACAGa                                                                                                       <  3:215381/66‑1 (MQ=255)

                                                                                                                           aaaGCTCCCTTATCACTCACGGTGATAAGGATGGTtggtg                                                                                                                               <  1:692182/40‑1 (MQ=255)

                                                                                                                           aaaGCTCCCTTATCACTCACGGTGATAAGGATGGTtggtg                                                                                                                               >  2:692182/1‑40 (MQ=255)

                                                                                                                            aaGCTCCCTTATCACTCACGGTGATAAGGATGGTTGGTGGTGATGCTCCACGCCCGGTACAGACTCTCTGCGACCAGCACGCGAACCAGCGGATggggg                                                                   >  4:92827/1‑99 (MQ=255)

                                                                                                                            aaGCTCCCTTATCACTCACGGTGATAAGGATGGTTGGTGGTGATGCTCCACGCCCGGTACAGACTCTCTGCGACCAGCACGCGAACCAGCGGATggggg                                                                   <  3:92827/99‑1 (MQ=255)

                                                                                                                               cTCCCTTATCACTCACGGTGATAAGGATGGTTGGTGGTGATGCTCCACGCCCGGTACAGACTCTCTGCGACCAGCACGCGAACCAGCGGATGGGGGAGGGTAAGCGCCGACAGCGACCAGCTCTGCTCAGCCGCCGCTTTAcaggcag               <  2:1018974/148‑1 (MQ=255)

                                                                                                                                   cTTATCACTCACGgtgataagggagctttgagtagaaaacgcagcggatgaa                                                                                                           >  4:476946‑M2/1‑13 (MQ=255)

                                                                                                                                   cTTATCACTCACGgtgataagggagctttgagtagaaaacgcagcggatgaa                                                                                                           <  3:476946‑M2/52‑40 (MQ=255)

                                                                                                                                   cTTATCACTCACGGTGATAAGGGTGGTTGGTGGTGATGCTCCACGCCCGGTACAGACTCTCTGCGACCAGCACGCGACCCAGCGGATGGGGGAGGGTAAGCGCCGACAGCGACCAGCTCTGCTCAGCCGCCGCTTTAcaggca                <  4:988884/143‑1 (MQ=255)

                                                                                                                                   cTTATCACTCACGGTGATAAGGGTGGTTGGTGGTGATGCTCCACGCCCGGTACAGACTCTCTGCGACCAGCACGCGAACCAGCGGATGGGGGAGGGTAAGCGCCGACAGCGACCAGCTCTGCTCAGCCGCCGCTTTGcaggca                >  3:988884/1‑143 (MQ=255)

                                                                                                                                   cTTATCACTCACGGTGATAAGGATGGTTGGTGGTGATGCTCCACGCCCGGTACAGACTCTCTGCGACCAGCACGCGAACCAGCGGATg                                                                       <  1:289713/88‑1 (MQ=255)

                                                                                                                                   cTTATCACTCACGGTGATAAGGATGGTTGGTGGTGATGCTCCACGCCCGGTACAGACTCTCTGCGACCAGCACGCGAACCAGCGGATg                                                                       >  2:289713/1‑88 (MQ=255)

                                                                                                                                    ttATCACTCACGgtgataagggagctttgagtagaaaacgcagcggatgaaactacagaactcttttcgcgactatacggcagagtccgcgct                                                                 <  2:431855‑M2/93‑82 (MQ=255)

                                                                                                                                    ttATCACTCACGgtgataagggagctttgagtagaaaacgcagcggatgaaactacagaactcttttcgcgactatacggcagagtccgcgct                                                                 >  1:431855‑M2/1‑12 (MQ=255)

                                                                                                                                    ttATCACTCACGgtgataagggagctttgagtagaaaacgcagcgg                                                                                                                <  3:247280‑M2/46‑35 (MQ=255)

                                                                                                                                    ttATCACTCACGgtgataagggagctttgagtagaaaacgcagcgg                                                                                                                >  4:247280‑M2/1‑12 (MQ=255)

                                                                                                                                    ttATCACTCACGGTGATAAGGATGGTTGGTGGTGATGCTCCACGCCCGGTACAGACTCTCTGCGACCAGCACGCGAACCAGCGGATGGGGGAg                                                                 <  1:853941/93‑1 (MQ=255)

                                                                                                                                    ttATCACTCACGGTGATAAGGATGGTTGGTGGTGATGCTCCACGCCCGGTACAGACTCTCTGCGACCAGCACGCGAACCAGCGGATGGGGGAg                                                                 >  2:853941/1‑93 (MQ=255)

                                                                                                                                     tATCACTCACGgtgataagggagctttgagtagaaaacgcagcggatgaaactacagaactcttttcgcgactatacggcagagtccgcgctgtttgtgcgccgggcgctggtcgcctttttg                                  <  4:672901‑M2/123‑113 (MQ=255)

                                                                                                                                     tATCACTCACGgtgataagggagctttgagtagaaaacgcagcggatgaaactacagaactcttttcgcgactatacggcagagtccgcgctgtttgtgcgccgggcgctggtcgcctttttg                                  >  3:672901‑M2/1‑11 (MQ=255)

                                                                                                                                       tcactcacGGTGATAAGGATGGTTGGTGGTGATGCTCCACGCCCGGTACAGACTCTCTGCGACCAGCACGCGAACCAGCGGATggg                                                                     <  2:2097/86‑1 (MQ=255)

                                                                                                                                       tcactcacGGTGATAAGGATGGTTGGTGGTGATGCTCCACGCCCGGTACAGACTCTCTGCGACCAGCACGCGAACCAGCGGATGGGGGAGGGTAAg                                                           >  3:498489/1‑96 (MQ=255)

                                                                                                                                        cactcacGGTGATAAGGATGGTTGGTGGTGATGCTCCACGCCCGGTACAGACTCTCTGCGACCAGCACGCGAACCAGCGGATGGGGGAGGGTAAGCGCCGACAGCGACCAGCTCTGCTCAGCCGCCGCTTTACAGGCAGGCGACAAcc      >  2:183810/1‑148 (MQ=255)

                                                                                                                                          ctcacGGTGATAAGGATGGTTGGTGGTGATGCTCCACGCCCGGTACAGACTCTCTGCGACCAGCACGCGAACCAGCGGATGGGGGAGGGTAAGCGCCGACAGCGACCAGCTCTGCTCAGCCGCCGCTTTACAGGCAGGCGACAACCCt    <  2:311064/148‑1 (MQ=255)

                                                                                                                                           tcacGGTGATAAGGATGGTTGGTGGTGATGCTCCACGCCCGGTACAGACTCTCTGCGACCAGCACGCGAACCAGCGGATGGGGGAGGGTAAGCGCCGACAGCGACCAGCTCTGCTCAGCCGCCGCTTTACAGGCAGGCGACAACCCtt   <  1:183810/148‑1 (MQ=255)

                                                                                                                                            cacGGTGATAAGGATGGTTGGTGGTGATGCTCCACGCCCGGTACAGACTCTCTGCg                                                                                              >  1:761075/1‑56 (MQ=255)

                                                                                                                                            cacGGTGATAAGGATGGTTGGTGGTGATGCTCCACGCCCGGTACAGACTCTCTGCGACCAGCACGCGAACCAGCGGATGGGGGAGGGTAAGCGCCGACAGCg                                                <  2:243993/102‑1 (MQ=255)

                                                                                                                                            cacGGTGATAAGGATGGTTGGTGGTGATGCTCCACGCCCGGTACAGACTCTCTGCGACCAGCACGCGAACCAGCGGATGGGGGAGGGTAAGCGCCGACAGCg                                                >  1:243993/1‑102 (MQ=255)

                                                                                                                                            cacGGTGATAAGGATGGTTGGTGGTGATGCTCCACGCCCGGTACAGACTCTCTGCGACCAGCACGCGAACCAGCGGATGGGGGAGGGTAAGCGCCGACAGCGACCAGCTCTGCTCAGCCGCCGCt                         >  4:305811/1‑125 (MQ=255)

                                                                                                                                            cacGGTGATAAGGATGGTTGGTGGTGATGCTCCACGCCCGGTACAGACTCTCTGCGACCAGCACGCGAACCAGCGGATGGGGGAGGGTAAGCGCCGACAGCGACCAGCTCTGCTCAGCCGCCGCt                         <  3:305811/125‑1 (MQ=255)

                                                                                                                                            cacGGTGATAAGGATGGTTGGTGGTGATGCTCCACGCCCGGTACAGACTCTCTGCGACCAGCACGCGAACCAGCGGATGGGGGAGGGTAAGCGCCGACAGCGACCAGCTCTGCTCAGCCGCCGCTTTa                      <  4:964475/128‑1 (MQ=255)

                                                                                                                                            cacGGTGATAAGGATGGTTGGTGGTGATGCTCCACGCCCGGTACAGACTCTCTGCGACCAGCACGCGAACCAGCGGATGGGGGAGGGTAAGCGCCGACAGCGACCAGCTCTGCTCAGCCGCCGCTTTACAGGCAGGCGACAACCCTTc  <  3:999761/148‑1 (MQ=255)

                                                                                                                                              cGGTGATAAGGATGGTTGGTGGTGATGCTCCACGCCCGGTACAGACTCTCTGCGACCAGCACGCGAACCAGCGGATGGGGGAGGGTAAGCGCCGACAGCGACCAGCTCTGCTCAGCCGCCGCTTTACAGGCAGGCGACAAccc     <  4:1127887/143‑1 (MQ=255)

                                                                                                                                              cGGTGATAAGGATGGTTGGTGGTGATGCTCCACGCCCGGTACAGACTCTCTGCGACCAGCACGCGAACCAGCGGATGGGGGAGGGTAAGCGCCGACAGCGACCAGCTCTGCTCAGCCGCCGCTTTACAGGCAGGCGACAAccc     >  3:1127887/1‑143 (MQ=255)

AAGCACGCCGGTCAGCAGCAAAATCCCCAAAAAGGCGACCAGCGCCCGGCGCACAAACAGCGCGGACTCTGCCGTATAGTCGCGAAAAGAGTTCTGTAGTTTCATCCGCTGCGTTTTCTACTCAAAGCTCCCTTATCACTCACGGTGATAAGGATGGTTGGTGGTGATGCTCCACGCCCGGTACAGACTCTCTGCGACCAGCACGCGAACCAGCGGATGGGGGAGGGTAAGCGCCGACAGCGACCAGCTCTGCTCAGCCGCCGCTTTACAGGCAGGCGACAACCCTTC  >  NC_000913/668113‑668400

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 16 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 38 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.