New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 3670807 =69 (0.670)3 (0.030) 3/252 NT 3.8% coding (1216/1650 nt) treF cytoplasmic trehalase
?NC_000913 3670847 = 86 (0.870)coding (1256/1650 nt) treF cytoplasmic trehalase
Rejected: Frequency below/above cutoff threshold.

Only 100 of 102 total aligned reads displayed.

GAGAAAGAGACAGAAGCACTGTTCCGCCAGAAAGCCAGTGCCCGTCGCGATGCGGTAAACCGTTACCTCTGGGATGATGAAAACGGCATCTACCGCGATTACGACTGGCGACGCGAACAACTGGCGCTGTTTTCCGCTGCCGCCATTGTGCCACTCTATGTCGGTATGGCGAACCATGAACAGGCCGATCGTCTGGCAAACGCCGTGCGCAGTCGGTTACTGACACCTGGCGGGATTCTGGCAAGCGAGTACGAAACCGGTGAACAGTGGGATAAACCCAACGGCTGGGCA  >  NC_000913/3670702‑3670992
                                                                                                                                                 |                                                                                                                                                 
gagaAAGAGACAGAAGCACTGTTCCGCCAGAAAGCCAGTGCCCGTCGCGATGCGGTAAACCGTTACCTCTGGGATGATGAAAACGGCATCTACCGCGATTACGACTGGCGACGCGAACAACTGGCGCTGTTTTCCGCTGCCGCCATtgt                                                                                                                                                >  2:781837/1‑149 (MQ=255)
actcgcttgccagaatcccgccaggtgtcagtaaccgactgcgcacggcgtttgccagacgatcggcctgttcatggttcgccataccgacatagagtggcaccaTGGCGACGCGAACAACTGGCGCTGTTTTCCTCGGCCGCCATtgt                                                                                                                                                >  4:665261‑M1/106‑149 (MQ=255)
 agaAAGAGACAGAAGCACTGTTCCGCCAGAAAGCCAGTGCCCGTCGCGATGCGGTAAACCGTTACCTCTGGGATGATGAAAACGGCATCTACCGCGATTACGACTGGCGACGCGAACAACTGGCGCTGTTTTCCGCTGCCGCCATtgtg                                                                                                                                               <  4:445951/149‑1 (MQ=255)
  gaAAGAGACAGAAGCACTGTTCCGCCAGAAAGCCAGTGCCCGTCGCGATGCGGTAAACCGTTACCTCTGGGATGATGAAAACGGCATCTACCGCGATTACGACTGGCGACGCGAACAACTGGCGCTGTTTTCCGCTGCCGCCATTGTGc                                                                                                                                              <  2:415549/149‑1 (MQ=255)
  gaAAGAGACAGAAGCACTGTTCCGCCAGAAAGCCAGTGCCCGTCGCGATGCGGTAAACCGTTACCTCTGGGATGATGAAAACGGCATCTACCGCGATTACGACTGGCGACGCGAACAACTGGCGCTGTTTTCCGCTGCCGCCATTGTGc                                                                                                                                              >  1:641296/1‑149 (MQ=255)
     agagACAGAAGCACTGTTCCGCCAGAAAGCCAGTGCCCGTCGCGATGCGGTAAACCGTTACCTCTGGGATGATGAAAACGGCATCTACCGCGATTACGACTGGCGACGCGAACAACTGGCGCTGTTTTCCGCTGCCGCCATTGTGCCAc                                                                                                                                           <  3:917144/149‑1 (MQ=255)
        gaCAGAAGCACTGTTCCGCCAGAAAGCCAGTGCCCGTCGCGATGCGGTAAACCGTTACCTCTGGGATGATGAAAACGGCATCTACCGCGATTACGACTGGCGACGCGAACAACTGGCGCTGTTTTCCGCTGCCGCCATTGTGCCActct                                                                                                                                        <  1:601231/149‑1 (MQ=255)
         aCAGAAGCACTGTTCCGCCAGAAAGCCAGTGCCCGTCGCGATGCGGTAAACCGTTACCTCTGGGATGATGAAAACGGCATCTACCGCGATTACGACTGGCGACGCGAACAACTGGCGCTGTTTTCCGCTGCCGCCATTGTGCCACTCTa                                                                                                                                       >  2:510009/1‑149 (MQ=255)
            gAAGCACTGTTCCGCCAGAAAGCCAGTGCCCGTCGCGATGCGGTAAACCGTTACCTCTGGGATGATGAAAACGGCATCTACCGCGATTACGACTGGCGACGCGAACAACTGGCGCTGTTTTCCGCTGCCGCCATTGTGCCACTCTATGt                                                                                                                                    >  2:891888/1‑149 (MQ=255)
            gAAGCACTGTTCCGCCAGAAAGCCAGTGCCCGTCGCGATGCGGTAAACCGTTACCTCTGGGATGATGAAAACGGCATCTACCGCGATTACGACTGGCGACGCGAACAACTGGCGCTGTTTTCCGCTGCCGCCATTGTGCCACTCTATGt                                                                                                                                    >  2:780337/1‑149 (MQ=255)
              aGCACTGTTCCGCCAGAAAGCCAGTGCCCGTCGCGATGCGGTAAACCGTTACCTCTGGGATGATGAAAACGGCATCTACCGCGATTACGACTGGCGACGCGAACAACTGGCGCTGTTTTCCGCTGCCGCCATTGTGCCACTCTATGTCg                                                                                                                                  <  1:781837/149‑1 (MQ=255)
                cACTGTTCCGCCAGAAAGCCAGTGCCCGTCGCGATGCGGTAAACCGTTACCTCTGGGATGATGAAAACGGCATCTACCGCGATTACGACTGGCGACGCGAACAACTGGCGCTGTTTTCCGCTGCCGCCATTGTGCCACTCTATGTCGGt                                                                                                                                <  1:638667/149‑1 (MQ=255)
                 aCTGTTCCGCCAGAAAGCCAGTGCCCGTCGCGATGCGGTAAACCGTTACCTCTGGGATGATGAAAACGGCATCTACCGCGATTACGACTGGCGACGCGAACAACTGGCGCTGTTTTCCGCTGCCGCCATTGTGCCACTCTATGTCGGTa                                                                                                                               <  1:891888/149‑1 (MQ=255)
                  cTGTTCCGCCAGAAAGCCAGTGCCCGTCGCGATGCGGTAAACCGTTACCTCTGGGATGATGAAAACGGCATCTACCGCGATTACGACTGGCGACGTGAACAACTGGCGCTGTTTTCCGCTGCCGCCATTGTGCCACTCTATGTCGGTAt                                                                                                                              >  4:688933/1‑149 (MQ=255)
                    gTTGCGCCAGAAAGCCAGTGCCCGTCGCGATGCGGTAAACCGTTACCTCTGGGATGATGAAAACGGCATCTACCGCGATTACGACTGGCGACGCGAACAACTGGCGCTGTTTTCCGCTGCCGCCATTGTGCCACTCTATGTCGGTATgg                                                                                                                            <  4:315166/149‑1 (MQ=255)
                         gCCAGAAAGCCAGTGCCCGTCGCGATGCGGTAAACCGTTACCTCTGGGATGATGAAAACGGCATCTACCGCGATTACGACTGGCGACGCGAACAACTGGCGCTGTTTTCCGCTGCCGCCATTGTGCCACTCTATGTCGGTATGGCGAAc                                                                                                                       >  2:907367/1‑149 (MQ=255)
                          ccAGAAAGCCAGTGCCCGTCGCGATGCGGTAAACCGTTACCTCTGGGATGATGAAAACGGCATCTACCGCGATTACGACTGGCGACGCGAACAACTGGCGCTGTTTTCCGCTGCCGCCATTGTGCCACTCTATGTCGGTATGGCGAAcc                                                                                                                      >  2:182159/1‑149 (MQ=255)
                            aGAAAGCCAGTGCCCGTCGCGATGCGGTAAACCGTTACCTCTGGGATGATGAAAACGGCATCTACCGCGATTACGACTGGCGACGCGAACAACTGGCGCTGTTTTCCGCTGCCGCCATTGTGCCACTCTATGTCGGTATGGCGAACCAt                                                                                                                    >  1:12487/1‑149 (MQ=255)
                            aGAAAGCCAGTGCCCGTCGCGATGCGGTAAACCGTTACCTCTGGGATGATGAAAACGGCATCTACCGCGATTACGACTGGCGACGCGAACAACTGGCGCTGTTTTCCGCTGCCGCCATTGTGCCACTCTATGTCGGTATGGCGAACCAt                                                                                                                    >  4:358748/1‑149 (MQ=255)
                              aaaGCCAGTGCCCGTCGCGATGCGGTAAACCGTTACCTCTGGGATGATGAAAACGGCATCTACCGCGATTACGACTGGCGACGCGAACAACTGGCGCTGTTTTCCGCTGCCGCCATTGTGCCActct                                                                                                                                        <  1:308198/127‑1 (MQ=255)
                              aaaGCCAGTGCCCGTCGCGATGCGGTAAACCGTTACCTCTGGGATGATGAAAACGGCATCTACCGCGATTACGACTGGCGACGCGAACAACTGGCGCTGTTTTCCGCTGCCGCCATTGTGCCActct                                                                                                                                        >  2:308198/1‑127 (MQ=255)
                               aaGCCAGTGCCCGTCGCGATGCGGTAAACCGTTACCTCTGGGATGATGAAAACGGCATCTACCGCGATTACGACTGGCGACGCGAACAACTGGCGCTGTTTTCCGCTGCCGCCATTGTGCCACTCTATGTCGGTATGGCGAACCATGaa                                                                                                                 <  1:510009/149‑1 (MQ=255)
                                aGCCAGTGCCCGTCGCGATGCGGTAAACCGTTACCTCTGGGATGATGAAAACGGCATCTACCGCGATTACGACTGGCGACGCGAACAACTGGCGCTGTTTTCCGCTGCCGCCATTGTGCCACTCTATGTCGGTATGGCGAACCATGAAc                                                                                                                >  2:512661/1‑149 (MQ=255)
                                 gCCAGTGCCCGTCGCGATGCGGTAAACCGTTACCTCTGGGATGATGAAAACGGCATCTACCGCGATTACGACTGGCGACGCGAACAACTGGCGCTGTTTTCCGCTGCCGCCATTGTGCCACTCTATGTCGGTATGGCGAACCATGAACa                                                                                                               >  2:445858/1‑149 (MQ=255)
                                 gCCAGTGCCCGTCGCGATGCGGTAAACCGTTACCTCTGGGATGATGAAAACGGCATCTACCGCGATTACGACTGGCGACGCGAACAACTGGCGCTGTTTTCCGCTGCCGCCATTGTGCCACTCTATGTCGGTATGGCGAACCATGAACa                                                                                                               >  1:330902/1‑149 (MQ=255)
                                  ccAGTGCCCGTCGCGATGCGGTAAACCGTTACCTCTGGGATGATGAAAACGGCATCTACCGCGATTACGACTGGCGACGCGAACAACTGGCGCTGTTTTCCGCTGCCGCCATTGTGCCACTCTATGTCGGTATGGCGAACCATGAACAg                                                                                                              >  4:454291/1‑149 (MQ=255)
                                   cAGTGCCCGTCGCGATGCGGTAAACCGTTACCTCTGGGATGATGAAAACGGCATCTACCGCGATTACGACTGGCGACGCGAACAACTGGCGCTGTTTTCCGCTGCCGCCATTGTGCCACTCTATGTCGGTATGGCGAACCATGAACAgg                                                                                                             >  1:206271/1‑149 (MQ=255)
                                    aGTGCCCGTCGCGATGCGGTAAACCGTTACCTCTGGGATGATGAAAACGGCATCTACCGCGATTACGACTGGCGACGCGAACAACTGGCGCTGTTTTCCGCTGCCGCCATTGTGCCACTCTATGTCGGTATGGCGAACCATGAACAGGc                                                                                                            <  4:32494/149‑1 (MQ=255)
                                    aGTGCCCGTCGCGATGCGGTAAACCGTTACCTCTGGGATGATGAAAACGGCATCTACCGCGATTACGACTGGCGACGCGAACAACTGGCGCTGTTTTCCGCTGCCGCCATTGTGCCACTCTATGTCGGTATGGCGAACCATGAACAGGc                                                                                                            <  4:274538/149‑1 (MQ=255)
                                    aGTGCCCGTCGCGATGCGGTAAACCGTTACCTCTGGGATGATGAAAACGGCATCTACCGCGATTACGACTGGCGACGCGAACAACTGGCGCTGTTTTCCGCTGCCGCCATTGTGCCACTCTATGTCGGTATGGCGAACCATGAACAGGc                                                                                                            >  2:252057/1‑149 (MQ=255)
                                      tGCCCGTCGCGATGCGGTAAACCGTTACCTCTGGGATGATGAAAACGGCATCTACCGCGATTACGACTGGCGACGCGAACAACTGGCGCTGTTTTCCGCTGCCGCCATTGTGCCACTCTATGTCGGTATGGCGAACCATGAACAGGCCg                                                                                                          >  3:555561/1‑149 (MQ=255)
                                         ccGTCGCGATGCGGTAAACCGTTACCTCTGGGATGATGAAAACGGCATCTACCGCGATTACGACTGGCGACGCGAACAACTGGCGCTGTTTTCCGCTGCCGCCATTGTGCCACTCTATGTCGGTATGGCGAACCATGAACAGGCCGATc                                                                                                       <  3:733421/149‑1 (MQ=255)
                                         ccGTCGCGATGCGGTAAACCGTTACCTCTGGGATGATGAAAACGGCATCTACCGCGATTACGACTGGCGACGCGAACAACTGGCGCTGTTTTCCGCTGCCGCCATTGTGCCACTCTATGTCGGTATGGCGAACCATGAACAGGCCGATc                                                                                                       <  1:892216/149‑1 (MQ=255)
                                            tCGCGATGCGGTAAACCGTTACCTCTGGGATGATGAAAACTGCATCTACCGCGATTACGACTGGCGACGCGAACAACTGGCGCTGTTTTCCGCTGCCGCCATTGTGCCACTCTATGTCGGTATGGCGAACCATGAACAGGCCGATCGTc                                                                                                    <  4:496702/149‑1 (MQ=255)
                                             cgcgATGCGGTAAACCGTTACCTCTGGGATGATGAAAACGGCATCTACCGCGATTACGACTGGCGACGCGAACAACTGGCGCTGTTTTCCGCTGCCGCCATTGTGCCACTCTATGTCGGTATGGCGAACCATGAACAGGCCGATCGTCt                                                                                                   <  3:454291/149‑1 (MQ=255)
                                              gcgATGCGGTAAACCGTTACCTCTGGGATGATGAAAACGGCATCTACCGCGATTACGGCTGGCGACGCGAACAACTGGCGCTGTTTTCCGCTGCCGCCATTGTGCCACTCTATGTCGGTATGGCGAACCATGAACAGGCCGATCGTCTg                                                                                                  <  1:153185/149‑1 (MQ=255)
                                              gcgATGCGGTAAACCGTTACCTCTGGGATGATGAAAACGGCATCTACCGCGATTACGACTGGCGACGCGAACAACTGGCGCTGTTTTCCGCTGCCGCCATTGTGCCACTCTATGTCGGTATGGCGAACCATGAACAGGCCGATCGTCTg                                                                                                  <  3:91350/149‑1 (MQ=255)
                                                gATGCGGTAAACCGTTACCTCTGGGATGATGAAAACGGCATCTACCGCGATTACGACTGGCGACGCGAACAACTGGCGCTGTTTTCCGCTGCCGCCATTGTGCCACTCTATGTCGGTATGGCGAACCATGAACAGGCCGATCGTCTGGc                                                                                                >  4:445219/1‑149 (MQ=255)
                                                    cGGTAAACCGTTACCTCTGGGATGATGAAAACGGCATCTACCGCGATTACGACTGGCGACGCGAACAACTGGCGCTGTTTTCCGCTGCCGCCATTGTGCCACTCTATGTCGGTATGGCGAACCATGAACAGGCCGATCGTCTGGCAAAc                                                                                            >  4:384902/1‑149 (MQ=255)
                                                     ggTAAACCGTTACCTCTGGGATGATGAAAACGGCATCTACCGCGATTACGACTGGCGACGCGAACAACTGGCGCTGTTTTCCGCTGCCGCCATTGTGCCACTCTATGTCGGTATGGCGAACCATGAACAGGCCGATCGTCTGGCAAACg                                                                                           >  2:787919/1‑149 (MQ=255)
                                                      gTAAACCGTTACCTCTGGGATGATGAAAACGGCATCTACCGCGATTACGACTGGCGACGCGAACAACTGGCGCTGTTTTCCGCTGCCGCCATTGTGCCACTCTATGTCGGTATGGCGAACCATGAACAGGCCGATCGTCTGGCAAACGc                                                                                          >  1:488107/1‑149 (MQ=255)
                                                         aaCCGTTACCTCTGGGATGATGAAAACGGCATCTACCGCGATTACGACTGGCGACGCGAACAACTGGCGCTGTTTTCCGCTGCCGCCATTGTGCCACTCTATGTCGGTATGGCGAACCATGAACAGGCCGATCGTCTgg                                                                                                 >  3:606612/1‑139 (MQ=255)
                                                         aaCCGTTACCTCTGGGATGATGAAAACGGCATCTACCGCGATTACGACTGGCGACGCGAACAACTGGCGCTGTTTTCCGCTGCCGCCATTGTGCCACTCTATGTCGGTATGGCGAACCATGAACAGGCCGATCGTCTgg                                                                                                 <  4:606612/139‑1 (MQ=255)
                                                          aCCGTTACCTCTGGGATGATGAAAACGGCATCTACCGCGATTACGACTGGCGACGCGAACAACTGGCGCTGTTTTCCGCTGCCGCCATTGTGCCACTCTATGTCGGTATGGCGAACCATGAACAGGCCGATCGTCTGGCAAACGCCGTg                                                                                      <  3:578471/149‑1 (MQ=255)
                                                            cGTTACCTCTGGGATGATGAAAACGGCATCTACCGCGATTACGACTGGCGACGCGAACAACTGGCGCTGTTTTCCGCTGCCGCCATTGTGCCACTCTATGTCGGTATGGCGAACCATGAACAGGCCGATCGTCTGGCAAACGCCGTgcg                                                                                    >  3:353539/1‑149 (MQ=255)
                                                                 ccTCTGGGATGATGAAAACGGCATCTACCGCGATTACGACTGGCGACGCGAACAACTTGCGCTGTTTTCCGCTGCCGCCATTGTGCCACTCTATGTCGGTATGGCGAACCATGAACAGGCCGATCGTCTGGCAAACGCCGTGCGCAGTc                                                                               <  2:597437/149‑1 (MQ=255)
                                                                  ctctGGGATGATGAAAACGGCATCTACCGCGATTACGACTGGCGACGCGAACAACTGGCGCTGTTTTCCGCTGCCGCCATTGTGCCACTCTATGTCGGTATGGCGAACCATGAACAGGCCGATCGTCTGGCAAACGCCGTGCGCAGTCg                                                                              <  1:68811/149‑1 (MQ=255)
                                                                   tctGGGATGATGAAAACGGCATCTACCGCGATTACGACTGGCGACGCGAACAACTGGCGCTGTTTTCCGCTGCCGCCATTGTGCCACTCTATGTCGGTATGGCGAACCATGAACAGGCCGATCGTCTGGCAAACGCCGTGCGCAGTCgg                                                                             >  1:207430/1‑149 (MQ=255)
                                                                     tGGGATGATGAAAACGGCATCTACCGCGATTACGACTGGCGACGCGAACAACTGGCGCTGTTTTCCGCTGCCGCCATTGTGCCACTCTATGTCGGTATGGCGAACCATGAACAGGCCGATCGTCTGGCAAACGCCGTGCGCAGTCGGtt                                                                           >  2:158289/1‑149 (MQ=255)
                                                                      ttcatggttcgccataccgacatagagtggcacaaTGGCGACGCGAACAACTGGCGCTGTTTTCCGCTGCCGCCAt                                                                                                                                                   >  2:213707‑M1/36‑76 (MQ=255)
                                                                      ttcatggttcgccataccgacatagagtggcacaaTGGCGACGCGAACAACTGGCGCTGTTTTCCGCTGCCGCCAt                                                                                                                                                   <  1:213707‑M1/41‑1 (MQ=255)
                                                                          tgatgaAAACGGCATCTACCGCGATTACGACTGGCGACGCGAACAACTGGCGCTGTTTTCCGCTGCCGCCATTGTGCCACTCTATGTCGGTATGGCGAACCATGAACAGGCCGATCGTCTGGCAAACGCCGTGCGCAGTCGGTTACTGa                                                                      <  3:793336/149‑1 (MQ=255)
                                                                             tgaAAACGGCATCTACCGCGATTACGACTGGCGACGCGAACAACTTGCGCTGTTTTCCGCTGCCGCCATTGTGCCACTCTATGTCGGTATGGCGAACCATGAACAGGCCGATCGTCTGGCAAACGCCGTGCGCAGTCGGTTACTGacac                                                                   >  3:528047/1‑149 (MQ=255)
                                                                             tgaAAACGGCATCTACCGCGATTACGACTGGCGACGCGAACAACTGGCGCTGTTTTCCGCTGCCGCCATTGTGCCACTCTATGTCGGTATGGCGAACCATGAACAGGCCGATCGTCTGGCAAACGCCGTGCGCAGTCGGTTACTGacac                                                                   <  1:842407/149‑1 (MQ=255)
                                                                              gaAAACGGCATCTACCGCGATTACGACTGGCGACGCGAACAACTGGCGCTGTTTTCCGCTGCCGCCATTGTGCCACTCTATGTCGGTATGGCGAACCATGAACAGGCCGATCGTCTGGCAAACGCCGTGCGCAGTCGGTTACTGACAcc                                                                  >  4:715616/1‑149 (MQ=255)
                                                                                    ggCATCTACCGCGATTACGACTGGCGACGCGAACAACTGGCGCTGTTTTCCGCTGCCGCCATTGTGCCACTCTATGTCGGTATGGCGAACCATGAACAGGCCGATCGTCTGGCAAACGCCGTGCGCAGTCGGTTACTGACACCTGGCgg                                                            <  3:817311/149‑1 (MQ=255)
                                                                                      cATCTACCGCGATTACGACTGGCGACGCGAACAACTGGCGCTGTTTTCCGCTGCCGCCATTGTGCCACTCTATGTCGGTATGGCGAACCATGAACAGGCCGATCGTCTGGCAAACGCCGTGCGCAGTCGGTTACTGACACCTGGCGGGa                                                          <  2:702565/149‑1 (MQ=255)
                                                                                          tACCGCGATTACGACTGGCGACGCGAACAACTGGCGCTGTTTTCCGCTGCCGCCATTGTGCCACTCTATGTCGGTATGGCGAACCATGAACAGGCCGATCGTCTGGCAAACGCCGTGCGCAGTCGGTTACTGACACCTGGCGGGATTCt                                                      <  4:555561/149‑1 (MQ=255)
                                                                                           aCCGCGATTACGACTGGCGACGCGAACAACTGGCGCTGTTTTCCGCTGCCGCCATTGTGCCACTCTATGTCGGTATGGCGAACCATGAACAGGCCGATCGTCTGGCAAACGCCGTGCGCAGTCGGTTACTGACACCTGGCGGGATTCTg                                                     <  4:574332/149‑1 (MQ=255)
                                                                                            ccGCGATTACGACTGGCGACGCGAACAACTGGCGCTGTTTTCCGCTGCCGCCATTGTGCCACTCTATGTCGGTATGGCGAACCATGAACAGGCCGATCGTCTGGCAAACGCCGTGCGCAGTCGGTTACTGACACCTGGCGGGATTCTgg                                                    >  1:457383/1‑149 (MQ=255)
                                                                                             cgcgATTACGACTGGCGACGCGAACAACTGGCGCTGTTTTCCGCTGCCGCCATTGTGCCACTCTATGTCGGTATGGCGAACCATGAACAGGCCGATCGTCTGGCAAACGCCGTGCGCAGTCGGTTACTGACACCTGGCGGGATTCTGGc                                                   <  3:732353/149‑1 (MQ=255)
                                                                                                   tACGACTGGCGACGCGAACAACTGGCGCTGTTTTCCGCTGCCGCCATTGTGCCACTCTATGTCGGTATGGCGAACCATGAACAGGCCGATCGTCTGGCAAACGCCGTGCGCAGTCGGTTACTGACACCTGGCGGGATTCTGGCAAGCGa                                             <  1:24428/149‑1 (MQ=255)
                                                                                                   tACGACTGGCGACGCGAACAACTGGCGCTGTTTTCCGCTGCCGCCATTGTGCCACTCTATGTCGGTATGGCGAACCATGAACAGGCCGATCGTCTGGCAAACGCCGTGCGCAGTCGGTTACTGACACCTGGCGGGATTCTGGCAAGCGa                                             <  2:335422/149‑1 (MQ=255)
                                                                                                    aCGACTGGCGACGCGAACAACTGGCGCTGTTTTCCGCTGCCGCCATTGTGCCACTCTATGTCGGTATGGCGAACCAt                                                                                                                    >  3:712633/1‑77 (MQ=255)
                                                                                                    aCGACTGGCGACGCGAACAACTGGCGCTGTTTTCCGCTGCCGCCATTGTGCCACTCTATGTCGGTATGGCGAACCAt                                                                                                                    <  4:712633/77‑1 (MQ=255)
                                                                                                     acaatggcggccgaggaaaacagcgccagttgttcgcgtcgccaTGGTGCCACTCTATGTCGGTATGGCGAACCATGAACAGGCCGATCGTCTGGCAAACGCCGTGCGCAGTCGGTTACTGACACCTGGCGGGATTCTGGCAAGCGAGt                                           >  4:665261‑M2/45‑149 (MQ=255)
                                                                                                       aCTGGCGACGCGAACAACTGGCGCTGTTTTCCGCTGCCGCCATTGTGCCACTCTATGTCGGTATGGCGAACCATGAACAGGCCGATCGTCTGGCAAACGCCGTGCGCAGTCGGTTACTGACACCTGGCGGGATTCTGGCAAGCGAGTAc                                         <  1:445858/149‑1 (MQ=255)
                                                                                                        cTGGCGACGCGAACAACTGGCGCTGTTTTCCGCTGCCGCCATTGTGCCACTCTATGTCGGTATGGCGAACCATGAACAGGCCGATCGTCTGGCAAACGCCGTGCGCAGTCGGTTACTGACACCTGGCGGGATTCTGGCAAGCGAGTACg                                        >  2:557574/1‑149 (MQ=255)
                                                                                                        cTGGCGACGCGAACAACTGGCGCTGTTTTCCGCTGCCGCCATTGTGCCACTCTATGTCGGTATGGCGAACCATGAACAGGCCGATCGTCTGGCAAACGCCGTGCGCAGTCGGTTACTGACACCTGGCGGGATTCTGGCAAGCGAGTACg                                        >  3:822521/1‑149 (MQ=255)
                                                                                                        atggcggcagcggaaaacagcgccagttgttcgcgtcgccaTTGTGCCACTCTATGTCGGTATGGCGAACCATGaa                                                                                                                 >  2:213707‑M2/42‑76 (MQ=255)
                                                                                                        atggcggcagcggaaaacagcgccagttgttcgcgtcgccaTTGTGCCACTCTATGTCGGTATGGCGAACCATGaa                                                                                                                 <  1:213707‑M2/35‑1 (MQ=255)
                                                                                                               cgcgAACAACTGGCGCTGTTTTCCGCTGCCGCCATTGTGCCACTCTATGTCGGTATGGCGAACCATGAACAGGCCGATCGTCTGGCAAACGCCGTGCGCAGTCGGTTACTGACACCTGGCGGGATTCTGGCAAGCGAGTACGAAACCgg                                 <  2:330902/149‑1 (MQ=255)
                                                                                                               cgcgAACAACTGGCGCTGTTTTCCGCTGCCGCCATTGTGCCACTCTATGTCGGTATGGCGAACCATGAACAGGCCGATCGTCTGGCAAACGCCGTGCGCAGTCGGTTACTGACACCTGGCGGGATTCTGGCAAGCGAGTACGAAACCgg                                 <  3:622566/149‑1 (MQ=255)
                                                                                                                gcgAACAACTGGCGCTGTTTTCCGCTGCCGCCATTGTGCCACTCTATGTCGGTATGGCGAACCATGAACAGGCCGATCGTCTGGCAAACGCCGTGCGCAGTCGGTTACTGACACCTGGTGGGATTCTGGCAAGCGAGTACGAAACCGGt                                <  1:907367/149‑1 (MQ=255)
                                                                                                                    acaacTGGCGCTGTTTTCCGCTGCCGCCATTGTGCCACTCTATGTCGGTATGGCGAACCATGAACAGGCCGATCGTCTGGCAAACGCCGTGCGCAGTCGGTTACTGACACCTGGCGGGATTCTGGCAAGCGAGTACGAAACCGGTGAAc                            <  2:207430/149‑1 (MQ=255)
                                                                                                                    acaacTGGCGCTGTTTTCCGCTGCCGCCATTGTGCCACTCTATGTCGGTATGGCGAACCATGAACAGGCCGATCGTCTGGCAAACGCCGTGCGCAGTCGGTTACTGACACCTGGCGGGATTCTGGCAAGCGAGTACGAAACCGGAGAAc                            >  3:417714/1‑149 (MQ=255)
                                                                                                                      aacTGGCGCTGTTTTCCGCTGCCGCCATTGTGCCACTCTATGTCGGTATGGCGAACCATGAACAGGCCGATCGTCTGGCAAACGCCGTGCGCAGTCGGTTACTGACACCTGGCGGGATTCTGGCAAGCGAGTACGAAACCGGTGAACAg                          >  1:440774/1‑149 (MQ=255)
                                                                                                                        cTGGCGCTGTTTTCCGCTGCCGCCATTGTGCCACTCTATGTCGGTATGGCGAACCATGAACAGGCCGATCGTCTGGCAAACGCCGTGCGCAGTCGGTTACTGACACCTGGCGGGATTCTGGCAAGCGAGTACGAAACCGGTGAACAGTg                        <  1:533396/149‑1 (MQ=255)
                                                                                                                        cTGGCGCTGTTTTCCGCTGCCGCCATTGTGCCACTCTATGTCGGTATGGCGAACCATGAACAGGCCGATCGTCTGGCAAACGCCGTGCGCAGTCGGTTACTGACACCTGGCGGGATTCTGGCAAGCGAGTACGAAACCGGTGAACAGTg                        <  2:518970/149‑1 (MQ=255)
                                                                                                                         tGGCGCTGTTTTCCGCTGCCGCCATTGTGCCACTCTATGTCGGTATGGCGAACCATGAACAGGCCGATCGTCTGGCAAACGCCGTGCGCAGTCGGTTACTGACACCTGGCGGGATTCTGGCAAGCGAGTACGAAACCGGTGAACAGTgg                       >  1:463145/1‑149 (MQ=255)
                                                                                                                         tGGCGCTGTTTTCCGCTGCCGCCATTGTGCCACTCTATGTCGGTATGGCGAACCATGAACAGGCCGATCGTCTGGCAAACGCCGTGCGCAGTCGGTTACTGACACCTGGCGGGATTCTGGCAAGCGAGTACGAAACCGGTGAACAGTgg                       >  1:386231/1‑149 (MQ=255)
                                                                                                                          ggCGCTGTTTTCCGCTGCCGCCATTGTGCCACTCTATGTCGGTATGGCGAACCATGAACAGGCCGATCGTCTGGCAAACGCCGTGCGCAGTCGGTTACTGACACCTGGCGGGATTCTGGCAAGCGAGTACGAAACCGGTGAACAGTggg                      <  2:295708/149‑1 (MQ=255)
                                                                                                                             gcTGTTTTCCGCTGCCGCCATTGTGCCACTCTATGTCGGTATGGCGAACCATGAACAGGCCGATCGTCTGGCAAACGCCGTGCGCAGTCGGTTACTGACACCTGGCGGGATTCTGGCAAGCGAGTACGAAACCGGTGAACAGTGGGATa                   >  3:753627/1‑149 (MQ=255)
                                                                                                                             gcTGTTTTCCGCTGCCGCCATTGTGCCACTCTATGTCGGTATGGCGAACCATGAACAGGCCGATCGTCTGGCAAACGCCGTGCGCAGTCGGTTACTGACACCTGGCGGGATTCTGGCAAGCGAGTACGAAACCGGTGAACAGTGGGATa                   >  2:335666/1‑149 (MQ=255)
                                                                                                                              cTGTTTTCCGCTGCCGCCATTGTGCCACTCTATGTCGGTATGGCGAACCATGAACAGGCCGATCGTCTGGCAAACGCCGTGCGCAGTCGGTTACTGACACCTGGCGGGATTCTGGCAAGCGAGTACGAAACCGGTGAACAGTGGGATaa                  >  4:360636/1‑149 (MQ=255)
                                                                                                                              cTGTTTTCCGCTGCCGCCATTGTGCCACTCTATGTCGGTATGGCGAACCATGAACAGGCCGATCGTCTGGCAAACGCCGTGCGCAGTCGGTTACTGACACCTGGCGGGATTCTGGCAAGCGAGTACGAAACCGGTGAACAGTGGGATaa                  >  2:417109/1‑149 (MQ=255)
                                                                                                                               tGTTTTCCGCTGCCGCCATTGTGCCACTCTATGTCGGTATGGCGAACCATGAACAGGCCGATCGTCTGGCAAACGCCGTGCGCAGTCGGTTACTGACACCTGGCGGGATTCTGGCAAGCGAGTACGAAACCGGTGAACAGTGGGATaaa                 >  1:775200/1‑149 (MQ=255)
                                                                                                                                gTTTTCCGCTGCCGCCATTGTGCCACTCTATGTCGGTATGGCGAACCATGAACAGGCCGATCGTCTGGCAAACGCCGTGCGCAGTCGGTTACTGACACCTGGCGGGATTCTGGCAAGCGAGTACGAAACCGGTGAACAGTGGGATAAAc                <  1:780337/149‑1 (MQ=255)
                                                                                                                                  tttCCGCTGCCGCCATTGTGCCACTCTATGTCGGTATGGCGAACCATGAACAGGCCGATCGTCTGGCAAACGCCGTGCGCAGTCGGTTACTGACACCTGGCGGGATTCTGGCAAGCGAGTACGAAACCGGTGAACAGTGGGATAAAccc              <  3:445219/149‑1 (MQ=255)
                                                                                                                                    tCCGCTGCCGCCATTGTGCCACTCTATGTCGGTATGGCGAACCATGAACAGGCCGATCGTCTGGCAAACGCCGTGCGCAGTCGGTTACTGACACCTGGCGGGATTCTGGCAAGCGAGTACGAAACCGGTGAACAGTGGGATAAACCCaa            >  4:793443/1‑149 (MQ=255)
                                                                                                                                    tCCGCTGCCGCCATTGTGCCACTCTATGTCGGTATGGCGAACCATGAACAGGCCGATCGTCTGGCAAACGCCGTGCGCAGTCGGTTACTGACACCTGGCGGGATTCTGGCAAGCGAGTACGAAACCGGTGAACAGTGGGATAAACCCaa            >  4:551475/1‑149 (MQ=255)
                                                                                                                                    tCCGCTGCCGCCATTGTGCCACTCTATGTCGGTATGGCGAACCATGAACAGGCCGATCGTCTGGCAAACGCCGTGCGCAGTCGGTTACTGACACCTGGCGGGATTCTGGCAAGCGAGTACGAAACCGGTGAACAGTGGGATAAACCCaa            <  3:715616/149‑1 (MQ=255)
                                                                                                                                     ccGCTGCCGCCATTGTGCCACTCTATGTCGGTATGGCGAACCATGAACAGGCCGATCGTCTGGCAAACGCCGTGCGCAGTCGGTTACTGACACCTGGCGGGATTCTGGCAAGCGAGTACGAAACCGGTGAACAGTGGGATAAACCCAAc           <  1:358262/149‑1 (MQ=255)
                                                                                                                                        cTGCCGCCATTGTGCCACTCTATGTCGGTATGGCGAACCATGAACAGGCCGATCGTCTGGCAAACGCCGTGCGCAGTCGGTTACTGACACCTGGCGGGATTCTGGCAAGCGAGTACGAAACCGGTGAACAGTGGGATAAACCCAACGGc        >  2:873529/1‑149 (MQ=255)
                                                                                                                                          gccgccATTGTGCCACTCTATGTCGGTATGGCGAACCATGAACAGGCCGATCGTCTGGCAAACGCCGTGCGCAGTCGGTTACTGACACCTGGCGGGATTCTGGCAACCGAGTACGAAACCGGTGAACAGTGGGATAAACCCAACGGCTg      >  1:763940/1‑149 (MQ=255)
                                                                                                                                           ccgccATTGTGCCACTCTATGTCGGTATGGCGAACCATGAACAGGCCGATCGTCTGGCAAACGCCGTGCGCAGTCGGTTACTGGCACCTGGCGGGATTCTGGCAAGCGAGTACGAAACCGGTGAACAGTGGGATAAACCCAACGGCTgg     >  4:523286/1‑149 (MQ=255)
                                                                                                                                             gccaTTGTGCCACTCTATGTCGGTATGGCGAACCATGAACAGGCCGATCGTCTGGCAAACGCCGTGCGCAGTCGGTTACTGACACCTGGCGGGATTCTGGCAAGCGAGTACGAGACCGGTGAACAGTGGGATAAACCCAACGGCTGGGc   >  3:836851‑M2/5‑149 (MQ=255)
                                                                                                                                             gccaTTGTGCCACTCTATGTCGGTATGGCGAACCATGAACAGGCCGATCGTCTGGCAAACGCCGTGCGCAGTCGGTTACTGACACCTGGCGGGATTCTGGCAAGCGAGTACGAAACCGGTGAACAGTGGGATAAACCCAACGGCTGGGc   >  2:195696‑M2/5‑149 (MQ=255)
                                                                                                                                                aTTGTGCCACTCTATGTCGGTATGGCGAACCATGAACAGGCCGATCGTCTGGCAAACGCCGTGCGCAGTCGGTTACTGACACCTGGCGGGATTCTg                                                     <  4:364212‑M2/95‑1 (MQ=255)
                                                                                                                                                aTTGTGCCACTCTATGTCGGTATGGCGAACCATGAACAGGCCGATCGTCTGGCAAACGCCGTGCGCAGTCGGTTACTGACACCTGGCGGGATTCTg                                                     >  3:364212‑M2/2‑96 (MQ=255)
                                                                                                                                                 |                                                                                                                                                 
GAGAAAGAGACAGAAGCACTGTTCCGCCAGAAAGCCAGTGCCCGTCGCGATGCGGTAAACCGTTACCTCTGGGATGATGAAAACGGCATCTACCGCGATTACGACTGGCGACGCGAACAACTGGCGCTGTTTTCCGCTGCCGCCATTGTGCCACTCTATGTCGGTATGGCGAACCATGAACAGGCCGATCGTCTGGCAAACGCCGTGCGCAGTCGGTTACTGACACCTGGCGGGATTCTGGCAAGCGAGTACGAAACCGGTGAACAGTGGGATAAACCCAACGGCTGGGCA  >  NC_000913/3670702‑3670992

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.