BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	3680367 =	NA (NA)	7 (0.080)	6/162	NT	NA	noncoding (1/76 nt)	REP265 (repetitive extragenic palindromic) element; contains 2 REP sequences	REP265 (repetitive extragenic palindromic) element; contains 2 REP sequences
*	?	NC_000913	3680397 =	NA (NA)	7 (0.080)	6/162	NT	NA	noncoding (31/76 nt)	REP265 (repetitive extragenic palindromic) element; contains 2 REP sequences	REP265 (repetitive extragenic palindromic) element; contains 2 REP sequences

Only 100 of 155 total aligned reads displayed.

GCGAAACGTGGGCACCTGACCGCAAGTACCGTTATTCAGTATCGCGGCGCGATTATCCCGCGTGAGGCGATGCCAGCGTAAACGCAGCATATGCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCATCCATAAATACCTGATGGTTGTGCTAACTCATCACCATCAGGCATTACTGTGCAGGTGGAATATCCG  >  NC_000913/3680268‑3680466

cgccacggatgacgtacatcctgaagtgacggatattccacctgcacagtaatgcctgatggtgatgagttagcacaaccatcaggtatttatggatgag                                                                                                     >  2:1365990‑M1/100‑100 (MQ=255)

 gccacggatgacgtacatcctgaagtgacggatattccacctgcacagtaatgcctgatggtgatgagttagcacaaccatcaggtatttatggatgaGc                                                                                                    >  1:940723‑M1/99‑100 (MQ=255)

 gccacggatgacgtacatcctgaagtgacggatattccacctgcacagtaatgcctgatggtgatgagttagcacaaccatcaggtatttatggatgaGc                                                                                                    <  2:2611407‑M1/2‑1 (MQ=255)

  ccacggatgacgtacatcctgaagtgacggatattccacctgcacagtaatgcctgatggtgatgagttagcacaaccatcaggtatttatggatgagcn                                                                                                   >  2:1729101‑M1/98‑99 (MQ=255)

   atctttgctcgtacatcctgaagtgacggatattccacctgcacagtaatgcctgatggtgatgagttagcacaaccatcaggtatttatggatgaGCTg                                                                                                  >  1:2582878‑M1/97‑100 (MQ=255)

    aaCGTGGGCACCTGACCGCAAGTACCGTTATTCAGTATCGCGGCGCGATTATCCCGCGTGAGGCGATGCCATCGTAAACGCAGCATATTCAAAAGGCttg                                                                                                 >  2:1662395/1‑98 (MQ=255)

    aaCGTGGGCACCTGACCGCAAGTACCGTTATTCAGTATCGCGGCGCGATTATCCCGCGTGAGGCGATGCCAGCGTAAACGCAGCATATGCAAAAGGCTgg                                                                                                 <  1:1015147/100‑1 (MQ=255)

    aaCGTGGGCACCTGACCGCAAGTACCGTTATTCAGTATCGCGGCGCGATTATCCCGCGTGAGGCGATGCCAGCGTAAACGCAGCATATGCAAAAGGCTgg                                                                                                 <  1:35147/100‑1 (MQ=255)

     cggatgacgtacatcctgaagtgacggatattccacctgcacagtaatgcctgatggtgatgagttagcacaaccatcaggtatttatggatgaGCTGGa                                                                                                >  1:2611425‑M1/95‑100 (MQ=255)

     aCGTGGGCACCTGACCGCAAGTACCGTTATTCAGTATCGCGGCGCGATTATCCCGCGTGAGGCGATGCCAGCGTAAACGCAGCATATGCAAAAGGCTGGa                                                                                                <  2:738245/100‑1 (MQ=255)

      cGTGGGCACCTGACCGCAAGTACCGTTATTCAGTATCGCGGCGCGATTATCCCGCGTGAGGCGATGCCAGCGTAAACGCAGCATATGCAAAAGGCTGGAt                                                                                               >  2:35198/1‑100 (MQ=255)

        tGGGCACCTGACCGCAAGTACCGTTATTCAGTATCGCGGCGCGATTATCCCGCGTGAGGCGATGCCAGCGTAAACGCAGCATATGCAAAAGGCTGGATaa                                                                                             >  1:1034394/1‑100 (MQ=255)

        tGGGCACCTGACCGCAAGTACCGTTATTCAGTATCGCGGCGCGATTATCCCGCGTGAGGCGATGCCAGCGTAAACGCAGCATATGCAAAAGGCTGGATaa                                                                                             >  1:1543941/1‑100 (MQ=255)

         tgacgtacatcctgaagtgacggatattccacctgcacagtaatgcctgatggtgatgagttagcacaaccatcaggtatttatggatgaGCTGGATaaa                                                                                            <  2:1145299‑M1/10‑1 (MQ=255)

         gggCACCTGACCGCAAGTACCGTTATTCAGTATCGCGGCGCGATTATCCCGCGTGAGGCGATGCCAGCGTAAACGCAGCATATGCAAAAGGCTGGATaag                                                                                            >  2:1291081/1‑99 (MQ=255)

          ggCACCTGACCGCAAGTACCGTTATTCAGTATCGCGGCGCGATTATCCCGCGTGAGGCGATGCCAGCGTAAACGCAGCATATGCAAAAGGCTGGATAAAg                                                                                           >  2:1653150/1‑100 (MQ=255)

           gCACCTGACCGCAAGTAGTGTTATTCAGTATCGCGGCGCGATTATCTCGCGTGAGGCGATTCCAGCGTAAACGCAGCATATGCAAAAGGCTGGATAAAgt                                                                                          >  2:1000675/1‑100 (MQ=255)

           gCACCTGACCGCAAGTACCGTTATTCAGTATCGCGGCGCGATTATCCCGCGTGAGGCGATGCCAGCGTAAACGCAGCATATGCAAAAGGCTGGATAAAgt                                                                                          <  2:821712/100‑1 (MQ=255)

           gCACCTGACCGCAAGTACCGTTATTCAGTATCGCGGCGCGATTATCCCGCGTGAGGCGATGCCAGCGTAAACGCAGCATATGCAAAAGGCTGGATAAAgt                                                                                          >  1:2729622/1‑100 (MQ=255)

            cACCTGACCGCAAGTACCGTTATTCAGTATCGCGGCGCGATTATCCCGCGTGAGGCGATGCCAGCGTAAACGCAGCATATGCAAAAGGCTGGATAAAgtg                                                                                         >  1:2066459/1‑100 (MQ=255)

              ccTGACCGCAAGTACCGTTATTCAGTATCGCGGCGCGATTATCCCGCGTGAGGCGATGCCAGCGTAAACGCAGCATATGCAAAAGGCTGGATAAAGTGtt                                                                                       >  2:983991/1‑100 (MQ=255)

              ccTGACCGCAAGTACCGTTATTCAGTATCGCGGCGCGATTATCCCGCGTGAGGCGATGCCAGCGTAAACGCAGCATATGCAAAAGGCTGGATAAAGTGtt                                                                                       <  1:716096/100‑1 (MQ=255)

              ccTGACCGCAAGTACCGTTATTCAGTATCGCGGCGCGATTATCCCGCGTGAGGCGATGCCAGCGTAAACGCAGCATATGCAAAAGGCTGGATAAAGTGtt                                                                                       >  1:272922/1‑100 (MQ=255)

               cTGACCGCAAGTACCGTTATTCAGTATCGCGGCGCGATTATCCCGCGTGAGGCGATGCCAGCGTAAACGCAGCATATGCAAAAGGCTGGATAAAGTGTTa                                                                                      <  1:2096875/100‑1 (MQ=255)

                tGACCGCAAGTACCGTTATTCAGTATCGCGGCGCGATTATCCCGCGTGAGGCGATGCCAGCGTAAACGCAGCATATGCAAAAGGCTGGATAAAGTGTTAc                                                                                     <  2:2047754/100‑1 (MQ=255)

                  aCCGCAAGTACCGTTATTCAGTATCGCGGCGCGATTATCCCGCGTGAGGCGATGCCAGCGTAAACGCAGCATATGCAAAAGGCTGGATAAAGTGTTAccc                                                                                   >  1:2668338/1‑100 (MQ=255)

                   ccGCAAGTACCGTTATTCAGTATCGCGGCGCGATTATCCCGCGTGAGGCGATGCCAGCGTAAACGCAGCATATGCAAAAGGCTGGATAAAGTGTTAcccc                                                                                  >  1:875352/1‑100 (MQ=255)

                   ccGCAAGTACCGTTATTCAGTATCGCGGCGCGATTATCCCGCGCGAGGCGATGCCAGCGTAAACGGAGCATATGCAAAAGGCTGGATAAAGTGTTAc                                                                                     >  2:950560/1‑97 (MQ=255)

                     gCAAGTACCGTTATTCAGTATCGCGGCGCGATTATCCCGCGTGAGGCGATGCCAGCGTAAACGCAGCATATGCAAAAGGCTGGATAAAGTGTTACCCctc                                                                                >  1:885789/1‑100 (MQ=255)

                     gCAAGTACCGTTATTCAGTATCGCGGCGCGATTATCCCGCGTGAGGCGATGCCAGCGTAAACGCAGCATATGCAAAAGGCTGGATAAAGTGTTACCCctc                                                                                <  2:2450986/100‑1 (MQ=255)

                     gCAAGTACCGTTATTCAGTATCGCGGCGCGATTATCCCGCGTGAGGCGATGCCAGCGTAAACGCAGCATATGCAAAAGGCTGGATAAAGTGTTACCCctc                                                                                >  1:620059/1‑100 (MQ=255)

                     gCAAGTACCGTTATTCAGTATCGCGGCGCGATTATCCCGCGTGAGGCGATGCCAGCGTAAACGCAGCATATGCAAAAGGCTGGATAAAGTGTTACCCctc                                                                                <  2:885194/100‑1 (MQ=255)

                       gatctccGTTATTCAGTATCGCGGCGCGATTATCCCGCGTGAGGCGATGCCAGCGTAAACGCAGCATATGCAAAAGGCTGGATAAAGTGTTACCCCTCTa                                                                              <  1:2523765/95‑1 (MQ=255)

                        aGTACCGTTATTCAGTATCGCGGCGCGATTATCCCGCGTGAGGCGATGCCAGCGTAAACGCAGCATATGCAAAAGGCTGGATAAAGTGTTACCCCTCTAt                                                                             >  1:1737277/1‑100 (MQ=255)

                          tgacggatattccacctgcacagtaatgcctgatggtgatgagttagcacaaccatcaggtatttatggatgaGCTGGATAAAGTGTTACCCCTCTATcc                                                                           >  1:1145304‑M1/74‑100 (MQ=255)

                          tACCGTTATTCAGTATCGCGGCGCGATTATCCCGCGTGAGGCGATGCCAGCGTAAACGCAGCATATGCAAAAGGCTGGATAAAGTGTTACCCCTCTa                                                                              >  2:1799228/1‑97 (MQ=255)

                          tACCGTTATTCAGTATCGCGGCGCGAGTATCCCGCGTGAGGCGATGCCAGCGTAAACGCAGCATATGCAAAAGGCTGGATAAAGTGTTACCCCTCTATcc                                                                           <  2:2104883/100‑1 (MQ=255)

                           gacggatattccacctgcacagtaatgcctgatggtgatgagttagcacaaccatcaggtatttatggatgaGCTGGATAAAGTGTTACCCCTCTATCCa                                                                          >  1:1547146‑M1/73‑100 (MQ=255)

                            ccGTTATTCAGTATCGCGGCGCGATTATCCCGCGTGAGGCGATGCCAGCGTAAACGCAGCATATGCAAAAGGCTGGATAAAGTGTTACCCCTCTaagatc                                                                         >  2:2523747/1‑95 (MQ=255)

                            ccGTTATTCAGTATCGCGGCGCGATTATCCCGCGTGAGGCGATGCCAGCGTAAACGCAGCATATGCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAg                                                                         >  1:1172877/1‑100 (MQ=255)

                             cGTTATTCAGTATCGCGGCGCGATTATCCCGCGTGAGGCGATGCCAGCGTAAACGCAGCATATGCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGc                                                                        <  1:415815/100‑1 (MQ=255)

                              gTTATTCAGTATCGCGGCGCGATTATCCCGCGTGAGGCGATGCCAGCGTAAACGCAGCATATGCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCt                                                                       <  1:1577474/100‑1 (MQ=255)

                              gTTATTCAGTATCGCGGCGCGATTATCCCGCGTGAGGCGATGCCAGCGTAAACGCAGCATATGCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCt                                                                       >  1:495714/1‑100 (MQ=255)

                              gTTATTCAGTATCGCGGCGCGATTATCCCGCGTGAGGCGATGCCAGCGTAAACGCAGCATATGCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCt                                                                       <  2:2075914/100‑1 (MQ=255)

                               ttATTCAGTATCGCGGCGCGATTATCCCGCGTGAGGCGATGCCAGCGTAAACGCAGCATATGCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCTc                                                                      >  1:2070700/1‑100 (MQ=255)

                                atattccacctgcacagtaatgcctgatggtgatgagttagcacaaccatcaggtatttatggatgaGCTGGATAAAGTGTTACCCCTCTATCCAGCTCa                                                                     >  1:1666482‑M1/68‑100 (MQ=255)

                                 tattccacctgcacagtaatgcctgatggtgatgagttagcacaaccatcaggtatttatggatgaGCTGGATAAAGTGTTACCCCTCTATCCAGCTCAt                                                                    >  2:659377‑M1/67‑100 (MQ=255)

                                   tCAGTATCGCGGCGCGATTATCCCGCGTGAGGCGATGCCAGCGTAAACGCAGCATATGCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCATcc                                                                  >  1:40263/1‑100 (MQ=255)

                                    cAGTATCGCGGCGCGATTATCCCGCGTGAGGCGATGCCAGCGTAAACGCAGCATATGCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGcagatcgg                                                                 >  2:307643/1‑93 (MQ=255)

                                     ccacctgcacagtaatgcctgatggtgatgagttagcacaaccatcaggtatttatggatgaGCTGGATAAAGTGTTACCCCTCTATCCAGCTCATCCAt                                                                >  1:2185121‑M1/63‑100 (MQ=255)

                                      gTATCGCGGCGCGATTATCCCGCGTGAGGCGATGCCAGCGTAAACGCAGCATATGCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCATCCATa                                                               >  1:813830/1‑100 (MQ=255)

                                      gTATCGCGGCGCGATTATCCCGCGTGAGGCGATGCCAGCGTAAACGCAGCATATGCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCATCCATa                                                               <  1:1510759/100‑1 (MQ=255)

                                       tATCGCGGCGCGATTATCCCGCGTGAGGCGATGCTAGCGTAAACGCAGCATATGCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCATCTCATCCATaa                                                              <  2:1439536/100‑1 (MQ=255)

                                        aTCGCGGCGCGATTATCCCGCGTGAGGCGATGCCAGCGTAAACGCAGCATATGCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCATCCATaaa                                                             >  2:2717070/1‑100 (MQ=255)

                                          cgcgGCGCGATTATCCCGCGTGAGGCGATGCCAGCGTAAACGCAGCATATGCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCATCCATAAATa                                                           <  2:405323/100‑1 (MQ=255)

                                           gcggcgCGATTATCCCGCGTGAGGCGATGCCAGCGTAAACGCAGCATATGCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCATCCATAAATAc                                                          >  2:1730937/1‑100 (MQ=255)

                                              gcgcGATTATCCCGCGTGAGGCGATGCCAGCGTAAACGCAGCATATGCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCATCCATAAATACCTg                                                       >  1:1204831/1‑100 (MQ=255)

                                                gcgATTATCCCGCGTGAGGCGATGCCAGCGTAAACGCAGCATATGCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCATCCATAAATACCTGAt                                                     <  1:580210/100‑1 (MQ=255)

                                                  gATTATCCCGCGTGAGGCGATGCCAGCGTAAACGCAGCATATGCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCATCCATAAATACCTGATgg                                                   <  1:2276016/100‑1 (MQ=255)

                                                     tATCCCGCGTGAGGCGATGCCAGCGTAAACGCAGCATATGCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCATCCATACATACCTGATGGTtg                                                <  2:1451813/100‑1 (MQ=255)

                                                      aTCCCGCGTGAGGGGATGCCAGCGTAAACGCAGCATATTCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCATCCATAAATACCTGATGGTtgt                                               >  2:1695529/1‑100 (MQ=255)

                                                      aTCCCGCGTGAGGCGATGCCAGCGTAAACGCAGCATATGCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCATCCATAAATACCTGATGGTtgt                                               <  1:1483975/100‑1 (MQ=255)

                                                      aTCCCGCGTGAGGCGATGCCAGCGTAAACGCAGCATATGCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCATCCATAAATACCTGATGGTtgt                                               <  1:1069098/100‑1 (MQ=255)

                                                        cccGCGTGAGGCGATGCCAGCGTAAACGCAGCATATGCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCATCCATAAATACCTGATGGTtgtg                                              >  1:1431736/1‑99 (MQ=255)

                                                         ccGCGTGAGGCGATGCCAGCGTAAACGCAGCATATGCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCATCCATAAATACCTGATGGTTGTGCt                                            >  1:1344977/1‑100 (MQ=255)

                                                          cgcgTGAGGCGATGCCAGCGTAAACGCAGCATATGCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCATCCATAAATACCTGATGGTTGTGCTa                                           >  1:1003504/1‑100 (MQ=255)

                                                            cgTGAGGCGATGCCAGCGTAAACGCAGCATATGCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCATCCATAAATACCTGATGGTTGTGCTAAc                                         <  1:524000/100‑1 (MQ=255)

                                                            cgTGAGGCGATGCCAGCGTAAACGCAGCATATGCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCATCCATAAATACCTGATGGTTGTGCTAAc                                         <  2:2694905/100‑1 (MQ=255)

                                                            cgTGAGGCGATGCCAGCGTAAACGAAAAATAAAAAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCATCCATAAATACCTGATGGTTGTGCTAAc                                         <  2:2671607/100‑1 (MQ=255)

                                                               gAGGCGATGCCAGCGTAAACGCAGCATATGCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCATCCATAAATACCTGATGGTTGTGCTAACtca                                      <  1:1399158/100‑1 (MQ=255)

                                                                 ggCGATGCCAGCGTAAACGCAGCATATGCAAAAGGCTGGATAAAGTGTTACCCCTCTATCAAGCTCAGCCATAAATACCTGATGGTTGTGCTAACtcatc                                    >  2:1929283/1‑100 (MQ=255)

                                                                 ggCGATGCCAGCGTAAACGCAGCATATGCAAAAGCCTGGATAAAGTGTTACCCCTCTATCCAGCCAATCCATAAATACCTGATGATTGTGCTAACtaatc                                    >  2:1149382/1‑100 (MQ=255)

                                                                 cgCGATGCCAGCGTAATCGCAGCATATCCAAAAGGCTGGGTAGCGTGTTACGCCCGTATCCAGCTCATCCATACATACCTGATGGTTTTGCTATCtca                                      >  2:1940194/2‑98 (MQ=255)

                                                                   cGATGCCAGCGTAAACGCAGCATATGCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCATCCATAAATACCTGATGGTTGTGCTAACTCATCAc                                  <  2:1285463/100‑1 (MQ=255)

                                                                        ccAGCGTAAACGCAGCATATGCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCATCCATAAATACCTGATGGTTGTGCTAACTCATCACCATCa                             >  1:2030292/1‑100 (MQ=255)

                                                                          aGCGTAAACGCAGCATATGCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCATCCATAAATACCTGATGGTTGTGCTAACTCATCACCATCa                             >  1:192133/1‑98 (MQ=255)

                                                                           gCGTAAACGCAGCATAGGCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCATCCATAAATACCTGATGGTTGTGCTAACTCATCACCATCAGGc                          <  1:350882/100‑1 (MQ=255)

                                                                            cGTAAACGCAGCATATGCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCATCCATAAATACCTGAGGGTTGTGCTAACTCATCACCATCAGGCa                         <  2:1845318/100‑1 (MQ=255)

                                                                             gTAAACGCAGCATATGCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCATCCATAAATACCTGATGGTTGTGCTAACTCATCACCATCAGGCAt                        <  2:432190/100‑1 (MQ=255)

                                                                               aaaCGCAGCATATGCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCATCCATAAATACCTGATGGTTGTGCTAACTCATCACCATCAGGCAtt                       <  2:332271/99‑1 (MQ=255)

                                                                               aaaCGCAGCATATGCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCATCCATAAATACCTGATGGTTGTGCTAACTCATCACCATCAGGCATTa                      >  2:2533026/1‑100 (MQ=255)

                                                                                 aCGCAGCATATGCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCATCCATAAATACCTGATGGTTGTGCTAACTCATCACCATCAGGCATTACt                    >  1:395550/1‑100 (MQ=255)

                                                                                  cGCAGCATATGCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCATCCATAAATACCTGATGGTTGTGCTAACTCATCACCATCAGGCATTACtg                   <  2:2236966/100‑1 (MQ=255)

                                                                                  cGCAGCATATGCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCATCCATAAATACCTGATGGTTGTGCTAACTCATCACCATCAGGCATTACtg                   >  1:1331384/1‑100 (MQ=255)

                                                                                    cagcaTATGCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCATCCATAAATACCTGATGGTTGTGCTAACTCATCACCATCAGGCATTACtgtg                 <  2:602184/100‑1 (MQ=255)

                                                                                      gcaTATGCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCATCCATAAATACCTGATGGTTGTGCTAACTCATCACCATCAGGCATTACTGTGCa               <  2:1548603/100‑1 (MQ=255)

                                                                                      gcaTATGCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCATCCATAAATACCTGATGGTTGTGCTAACTCATCACCATCAGGCATTACTGTGCa               >  2:357602/1‑100 (MQ=255)

                                                                                      gcaTATGCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCATCCATAAATACCTGATGGTTGTGCTAACTCATCACCATCAGGCATTACTGTGCa               >  2:2402599/1‑100 (MQ=255)

                                                                                      gcaTATGCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCATCCATAAATACCTGATGGTTGTGCTAACTCATCACCATCAGGCATTACTGTGCa               >  2:1980539/1‑100 (MQ=255)

                                                                                          atGCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCATCCATAAATACCTGATGGTTGTGCTAACTCATCACCATCAGGCATTACTGTGCAGGTg           >  2:2007418/1‑100 (MQ=255)

                                                                                          atGCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCATCCATAAATACCTGATGGTTGTGCTAACTCATCACCATCAGGCATTACTGTGCAGGTg           <  1:1701892/100‑1 (MQ=255)

                                                                                           tGCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCATCCATAAATACCTGATGGTTGTGCTAACTCATCACCATCAGGCATTACTGTGCAGGTgg          >  2:577154/1‑100 (MQ=255)

                                                                                            gCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCATCCATAAATACCTGATGGTTGTGCTAACTCATCACCATCAGGCATTACTGTGCAGGTGGa         <  2:2717659/100‑1 (MQ=255)

                                                                                             cAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCATCCATAAATACCTGATGGTTGTGCTAACTCATCACCATCAGGCATTACTGTGCAGGTGGaa        >  1:898104/1‑100 (MQ=255)

                                                                                             cAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCATCCATAAATACCTGATGGTTGTGCTAACTCATCACCATCAGGCATTACTGTGCAGGTGGaa        >  1:477909/1‑100 (MQ=255)

                                                                                             cAAAAGGCTGGAGAAAGTGTTACCCCTCTATGCAGCTCATCCAGAAATACCTGATGGTAGTGCTAACTCATCACCATCAGGCATTACTGTGCAGGTg           >  2:405233/1‑97 (MQ=255)

                                                                                              aaaaGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCATCCATAAATACCTGATGGTTGTGCTAACTCATCACCATCAGGCATTACTGTGCAGGTGGAat       >  2:2258887/1‑100 (MQ=255)

                                                                                                aaGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCATCCATAAATACCTGATGGTTGTGCTAACTCATCACCATCAGGCATTACTGTGCAGGTGGAatat     >  2:855406/1‑100 (MQ=255)

                                                                                                 aGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCATCCATAAATACCTGATGGTTGTGCTAACTCATCACCATCAGGCATTACTGTGCAGGTGGAATATc    <  1:357602/100‑1 (MQ=255)

                                                                                                  ggCTGGATAAAGTGTTACCCCTCTATCCAGCTCATCCATAAATACCTGATGGTTGTGCTAACTCATCACCATCAGGCATTACTGTGCAGGTGGAATATcc   >  1:1087514/1‑100 (MQ=255)

GCGAAACGTGGGCACCTGACCGCAAGTACCGTTATTCAGTATCGCGGCGCGATTATCCCGCGTGAGGCGATGCCAGCGTAAACGCAGCATATGCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCATCCATAAATACCTGATGGTTGTGCTAACTCATCACCATCAGGCATTACTGTGCAGGTGGAATATCCG  >  NC_000913/3680268‑3680466

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.