New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 3680367 =NA (NA)7 (0.080) 6/162 NT NA noncoding (1/76 nt) REP265 (repetitive extragenic palindromic) element; contains 2 REP sequences REP265 (repetitive extragenic palindromic) element; contains 2 REP sequences
?NC_000913 3680397 = NA (NA)noncoding (31/76 nt) REP265 (repetitive extragenic palindromic) element; contains 2 REP sequences REP265 (repetitive extragenic palindromic) element; contains 2 REP sequences

Only 100 of 139 total aligned reads displayed.

GTTATTCAGTATCGCGGCGCGATTATCCCGCGTGAGGCGATGCCAGCGTAAACGCAGCATATGCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCATCCATAAATACCTGATGGTTGTGCTAACTCATCACCATCAGGCATTACTGTGCAGGTGGAATATCCGTCACTTCAGGATGTACGTCATCCGTGGCGA  >  NC_000913/3680298‑3680496
                                                                                                   |                                                                                                   
gTTATTCAGTATCGCGGCGCGATTATCCCGCGTGTGGCTATGCCAGCGTAAACGCAGCATATGCAAAAGGCTGGATAAAGTGTTCCCCATCTTTCCAGCt                                                                                                     <  2:1445725/100‑1 (MQ=255)
gTTATTCAGTATCGCGGCGCGATTATCCCGCGTGAGGCGATGCCAGCGTAAACGCAGCATATGCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCt                                                                                                     <  2:2075914/100‑1 (MQ=255)
gTTATTCAGTATCGCGGCGCGATTATCCCGCGTGAGGCGATGCCAGCGTAAACGCAGCATATGCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCt                                                                                                     >  1:2614085/1‑100 (MQ=255)
gTTATTCAGTATCGCGGCGCGATTATCCCGCGTGAGGCGATGCCAGCGTAAACGCAGCATATGCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCt                                                                                                     <  1:1577474/100‑1 (MQ=255)
gTTATTCAGTATCGCGGCGCGATTATCCCGCGTGAGGCGATGCCAGCGTAAACGCAGCATATGCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCt                                                                                                     >  1:495714/1‑100 (MQ=255)
 ttATTCAGTATCGCGGCGCGATTATCCCGCGTGAGGCGATGCCAGCGTAAACGCAGCATATGCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCTc                                                                                                    >  1:2070700/1‑100 (MQ=255)
  tATTCAGTATCGCGGCGCGATTATCCCGCGTGAGGCGATGCCAGCGTAAACGCAGCATATGCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCa                                                                                                   <  1:485942/100‑1 (MQ=255)
  atattccacctgcacagtaatgcctgatggtgatgagttagcacaaccatcaggtatttatggatgaGCTGGATAAAGTGTTACCCCTCTATCCAGCTCa                                                                                                   >  1:395774‑M1/68‑100 (MQ=255)
  atattccacctgcacagtaatgcctgatggtgatgagttagcacaaccatcaggtatttatggatgaGCTGGATAAAGTGTTACCCCTCTATCCAGCTCa                                                                                                   >  1:1666482‑M1/68‑100 (MQ=255)
   tattccacctgcacagtaatgcctgatggtgatgagttagcacaaccatcaggtatttatggatgaGCTGGATAAAGTGTTACCCCTCTATCCAGCTCAt                                                                                                  >  2:659377‑M1/67‑100 (MQ=255)
     tCAGTATCGCGGCGCGATTATCCCGCGTGAGGCGATGCCAGCGTAAACGCAGCATATGCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCATcc                                                                                                <  1:1729946/100‑1 (MQ=255)
      cAGTATCGCGGCGCGATTATCCCGCGTGAGGCGATGCCAGCGTAAACGCAGCATATGCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCATCCa                                                                                               >  1:53732/1‑100 (MQ=255)
       ccacctgcacagtaatgcctgatggtgatgagttagcacaaccatcaggtatttatggatgaGCTGGATAAAGTGTTACCCCTCTATCCAGCTCATCCAt                                                                                              >  1:2185121‑M1/63‑100 (MQ=255)
        gTATCGCGGCGCGATTATCCCGCGTGAGGCGATGCCAGCGTAAACGCAGCATATGCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCATCCATa                                                                                             >  1:813830/1‑100 (MQ=255)
        gTATCGCGGCGCGATTATCCCGCGTGAGGCGATGCCAGCGTAAACGCAGCATATGCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCATCCATa                                                                                             <  1:35198/100‑1 (MQ=255)
          aTCGCGGCGCGATTATCCCGCGTGAGGCGATGCCAGCGTAAACGCAGCATATGCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCATCCATaaa                                                                                           >  1:1502852/1‑100 (MQ=255)
          aTCGCGGCGCGATTATCCCGCGTGAGGCGATGCCAGCGTAAACGCAGCATATGCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCATCCATaaa                                                                                           >  1:1428110/1‑100 (MQ=255)
          aTCGCGGCGCGATTATCCCGCGTGAGGCGATGCCAGCGTAAACGCAGCATATGCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCATCCATaaa                                                                                           >  2:2717070/1‑100 (MQ=255)
            cgcgGCGCGATTATCCCGCGTGAGGCGATGCCAGCGTAAACGCAGCATATGCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCATCCATAAATa                                                                                         <  2:405323/100‑1 (MQ=255)
             gcggcgCGATTATCCCGCGTGAGGCGATGCCAGCGTAAACGCAGCATATGCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCATCCATAAATAc                                                                                        >  2:1730937/1‑100 (MQ=255)
             gcggcgCGATTATCCCGCGTGAGGCGATGCCAGCGTAAACGCAGCATATGCAAAAGGCTGGATAAAGTGTTACACCTCTATCCAGCTCATCCATAAATAc                                                                                        >  1:1364020/1‑100 (MQ=255)
                gcgcGATTATCCCGCGTGAGGCGATGCCAGCGTAAACGCAGCATATGCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCATCCATAAATACCTg                                                                                     >  1:1204831/1‑100 (MQ=255)
                   cgATTATCCCGCGTGAGGCGATGCCAGCGTAAACGCAGCATATGCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCATCCATAAATACCTGATg                                                                                  <  1:469468/100‑1 (MQ=255)
                       tATCCCGCGTGAGGCGATGCCAGCGTAAACGCAGCATATGCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCATCCATACATACCTGATGGTtg                                                                              <  2:1451813/100‑1 (MQ=255)
                       tATCCCGCGTGAGGCGATGCCAGCGTAAACGCAGCATATGCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCATCCATAAATACCTGATGGTtg                                                                              <  2:972127/100‑1 (MQ=255)
                        aTCCCGCGTGAGGCGATGCCAGCGTAAACGCAGCATATGCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCATCCATAAATACCTGATGGTtgt                                                                             <  1:1069098/100‑1 (MQ=255)
                        aTCCCGCGTGAGGCGATGCCAGCGTAAACGCAGCATATGCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCATCCATAAATACCTGATGGTtgt                                                                             <  1:1483975/100‑1 (MQ=255)
                          cccGCGTGAGGCGATGCCAGCGTAAACGCAGCATATGCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCATCCATAAATACCTGATGGTtgtg                                                                            >  1:1431736/1‑99 (MQ=255)
                          cccGCGTGAGGCGATGCCAGCGTAAACGCAGCATATGCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCATCCATAAATACCTGATGGTTGTGc                                                                           >  2:1639748/1‑100 (MQ=255)
                           ccGCGTGAGGCGATGCCAGCGTAAACGCAGCATATGCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCATCCATAAATACCTGATGGTTGTGCt                                                                          >  1:1344977/1‑100 (MQ=255)
                           ccGCGTGAGGCGATGCCAGCGTAAACGCAGCATATGCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCATCCATAAATACCTGATGGTTGTGCt                                                                          >  2:1073594/1‑100 (MQ=255)
                            cgcgTGAGGCGATGCCAGCGTAAACGCAGCATATGCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCATCCATAAATACCTGATGGTTGTGCTa                                                                         >  1:1003504/1‑100 (MQ=255)
                              cgTGAGGCGATGCCAGCGTAAACGCAGCATATGCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCATCCATAAATACCTGATGGTTGTGCTAAc                                                                       >  2:523999/1‑100 (MQ=255)
                              cgTGAGGCGATGCCAGCGTAAACGCAGCATATGCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCATCCATAAATACCTGATGGTTGTGCTAAc                                                                       <  2:2694905/100‑1 (MQ=255)
                              cgTGAGGCGATGCCAGCGTAAACGCAGCATATGCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCATCCATAAATACCTGATGGTTGTGCTAAc                                                                       <  1:524000/100‑1 (MQ=255)
                              cgTGAGGCGATGCCAGCGTAAACGAAAAATAAAAAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCATCCATAAATACCTGATGGTTGTGCTAAc                                                                       <  2:2671607/100‑1 (MQ=255)
                                   ggCGATGCCAGCGTAAACGCAGCATATGCAAAAGGCTGGATAAAGTGTTACCCCTCTATCAAGCTCAGCCATAAATACCTGATGGTTGTGCTAACtcatc                                                                  >  2:1929283/1‑100 (MQ=255)
                                   ggCGATGCCAGCGTAAACGCAGCATATGCAAAAGCCTGGATAAAGTGTTACCCCTCTATCCAGCCAATCCATAAATACCTGATGATTGTGCTAACtaatc                                                                  >  2:1149382/1‑100 (MQ=255)
                                     cGATGCCAGCGTAAACGCAGCATATGCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCATCCATAAATACCTGATGGTTGTGCTAACTCATCAc                                                                <  2:1285463/100‑1 (MQ=255)
                                       aTGCCAGCGTAAACGCAGCATATGCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCATCCATAAATACCTGATGGTTGTGCTAACTCATCACCa                                                              <  2:605674/100‑1 (MQ=255)
                                          ccAGCGTAAACGCAGCATATGCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCATCCATAAATACCTGATGGTTGTGCTAACTCATCACCATCa                                                           >  1:2030292/1‑100 (MQ=255)
                                            aGCGTAAACGCAGCATATGCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCATCCATAAATACCTGATGGTTGTGCTAACTCATCACCATCAgg                                                         <  1:1546992/100‑1 (MQ=255)
                                             gCGTAAACGCAGCATAGGCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCATCCATAAATACCTGATGGTTGTGCTAACTCATCACCATCAGGc                                                        <  1:350882/100‑1 (MQ=255)
                                              cGTAAACGCAGCATATGCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCATCCATAAATACCTGAGGGTTGTGCTAACTCATCACCATCAGGCa                                                       <  2:1845318/100‑1 (MQ=255)
                                                 aaaCGCAGCATATGCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCATCCATAAATACCTGATGGTTGTGCTAACTCATCACCATCAGGCAtt                                                     <  2:332271/99‑1 (MQ=255)
                                                  aaCGCAGCATATGCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCATCCATAAATACCTGATGGTTGTGCTAACTCATCACCATCAGGCATTAc                                                   <  2:1954847/100‑1 (MQ=255)
                                                    cGCAGCATATGCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCATCCATAAATACCTGATGGTTGTGCTAACTCATCACCATCAGGCATTACtg                                                 <  2:246455/100‑1 (MQ=255)
                                                        gtatatGCAAAAGGCTGGATAAAGTGTGACCCCTCTATCCAGCTCATCCATAAATACCTGATGGTTGTGCTAACTCATCACCATCAGGCATTACTGTGCa                                             <  2:2588918/98‑1 (MQ=255)
                                                        gcaTATGCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCATCCATAAATACCTGATGGTTGTGCTAACTCATCACCATCAGGCATTACTGTGCa                                             >  2:357602/1‑100 (MQ=255)
                                                        gcaTATGCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCATCCATAAATACCTGATGGTTGTGCTAACTCATCACCATCAGGCATTACTGTGCa                                             >  2:1980539/1‑100 (MQ=255)
                                                        gcaTATGCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCATCCATAAATACCTGATGGTTGTGCTAACTCATCACCATCAGGCATTACTGTGCa                                             >  2:2402599/1‑100 (MQ=255)
                                                         caTATGCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCATCCATAAATACCTGATGGTTGTGCTAACTCATCACCATCAGGCATTACTGTGCAg                                            <  1:1825516/100‑1 (MQ=255)
                                                         caTATGCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCATCCATAAATACCTGATGGTTGTGCTAACTCATCACCATCAGGCATTACTGTGCAg                                            <  2:2106070/100‑1 (MQ=255)
                                                          atatGCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCATCCATAAATACCTGATGGTTGTGCTAACTCATCACCATCAGGCATTACTGTGCAgg                                           <  1:1151505/100‑1 (MQ=255)
                                                            atGCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCATCCATAAATACCTGATGGTTGTGCTAACTCATCACCATCAGGCATTACTGTGCAGGTg                                         >  2:2007418/1‑100 (MQ=255)
                                                             tGCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCATCCATAAATACCTGATGGTTGTGCTAACTCATCACCATCAGGCATTACTGTGCAGGTgg                                        >  2:577154/1‑100 (MQ=255)
                                                             atggatgagctggatagaggggtaacactttatccagcTCATCCATAAATACCTGATGGTTGTGCTAACTCATCACCATCAGGCATTACTGTGCAGGTgg                                        >  1:2185121‑M2/39‑100 (MQ=255)
                                                              gCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCATCCATAAATACCTGATGGTTGTGCTAACTCATCACCATCAGGCATTACTGTGCAGGTGGa                                       <  2:2717659/100‑1 (MQ=255)
                                                               cAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCATCCATAAATACCTGATGGTTGTGCTAACTCATCACCATCAGGCATTACTGTGCAGGTGGaa                                      <  2:1659789/100‑1 (MQ=255)
                                                               cAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCATCCATAAATACCTGATGGTTGTGCTAACTCATCACCATCAGGCATTACTGTGCAGGTGGaa                                      >  1:898104/1‑100 (MQ=255)
                                                               cAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCATCCATAAATACCTGATGGTTGTGCTAACTCATCACCATCAGGCATTACTGTGCAGGTGGaa                                      >  1:477909/1‑100 (MQ=255)
                                                               cAAAAGGCTGGAGAAAGTGTTACCCCTCTATGCAGCTCATCCAGAAATACCTGATGGTAGTGCTAACTCATCACCATCAGGCATTACTGTGCAGGTg                                         >  2:405233/1‑97 (MQ=255)
                                                                aaaaGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCATCCATAAATACCTGATGGTTGTGCTAACTCATCACCATCAGGCATTACTGTGCAGGTGGAat                                     >  2:2258887/1‑100 (MQ=255)
                                                                 atgagctggatagaggggtaacactttatccagcTCATCCATAAATACCTGATGGTTGTGCTAACTCATCACCATCAGGCATTACTGTGCAGGTGGAata                                    >  2:659377‑M2/35‑100 (MQ=255)
                                                                  tgagctggatagaggggtaacactttatccagcTCATCCATAAATACCTGATGGTTGTGCTAACTCATCACCATCAGGCATTACTGTGCAGGTGGAatat                                   >  1:395774‑M2/34‑100 (MQ=255)
                                                                  tgagctggatagaggggtaacactttatccagcTCATCCATAAATACCTGATGGTTGTGCTAACTCATCACCATCAGGCATTACTGTGCAGGTGGAatat                                   >  1:1666482‑M2/34‑100 (MQ=255)
                                                                   aGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCATCCATAAATACCTGATGGTTGTGCTAACTCATCACCATCAGGCATTACTGTGCAGGTGGAATATc                                  <  1:357602/100‑1 (MQ=255)
                                                                    ggCTGGATAAAGTGTTACCCCTCTATCCAGCTCATCCATAAATACCTGATGGTTGTGCTAACTCATCACCATCAGGCATTACTGTGCAGGTGGAATATcc                                 >  1:1087514/1‑100 (MQ=255)
                                                                     gctggatagaggggtaacactttatccagcTCATCCATAAATACCTGATGGTTGTGCTAACTCATCACCATCAGGCATTACTGTGCAGGTGGAATATCCg                                >  1:2051061‑M2/31‑100 (MQ=255)
                                                                       tggatagaggggtaacactttatccagcTCATCCATAAATACCTGATGGTTGTGCTAACTCATCACCATCAGGCATTACTGTGCAGGTGGAATATCCGTc                              >  1:1547146‑M2/29‑100 (MQ=255)
                                                                       TGGATAAAGTGTTACCCCTCTATCCAGCTCATCCATAAATACCTGATGGTTGTGCTAACTCATCACCATCAGGCATTACTGTGCAGGTGGAATATCCGTc                              >  1:584341‑M1/1‑100 (MQ=255)
                                                                          ATAAAGTGTTACCCCTCTATCCAGCTCATCCATAAATACCTGATGGTTGTGCTAACTCATCACCATCAGGCATTACTGTGCAGGTGGAATATCCGTCACt                           <  2:989602‑M1/100‑1 (MQ=255)
                                                                          ATAAAGTGTTACCCCTCTATCCAGCTCATCCATAAATACCTGATGGTTGTGCTAACTCATCACCATCAGGCATTACTGTGCAGGTGGAATATCCGTCACt                           <  1:1438654‑M1/100‑1 (MQ=255)
                                                                           TAAAGTGTTACCCCTCTATCCAGCTCATCCATAAATACCTGATGGTTGTGCTAACTCATCACCATCAGGCATTACTGTGCAGGTGGAATATCCGTCACtt                          <  2:1507118‑M1/100‑1 (MQ=255)
                                                                            AAAGTGTTACCCCTCTATCCAGCTCATCCATAAATACCTGATGGTTGTGCTAACTCATCACCATCAGGCATTACTGTGCAGGTGGAATATCCGTCACTTc                         >  1:1901112‑M1/1‑100 (MQ=255)
                                                                            AAAGTGTTACCCCTCTATCCAGCTCATCCATAAATACCTGATGGTTGTGCTAACTCATCACCATCAGGCATTACTGTGCAGGTGGAATATCCGTCACTTc                         <  1:250525‑M1/100‑1 (MQ=255)
                                                                             aaGTGTTACCCCTCTATCCAGCTCATCCATAAATACCTGATGGTTGTGCTAACTCATCACCATCAGGCATTACTGTGCAGGTGGAATATCCGTCACTTCa                        <  2:1034390/100‑1 (MQ=255)
                                                                                tgtTACCCCTCTATCCAGCTCATCCATAAATACCTGATGGTTGTGCTAACTCATCACCATCAGGCATTACTGTGCAGGTGGAATATCCGTCACTTCAGGa                     <  2:2304778/100‑1 (MQ=255)
                                                                                tgtTACCCCTCTATCCAGCTCATCCATAAATACCTGATGGTTGTGCTAACTCATCACCATCAGGCATTACTGTGCAGGTGGAATATCCGTCACTTCAGGa                     <  2:620057/100‑1 (MQ=255)
                                                                                tgtTACCCCTCTATCCAGCTCATCCATAAATACCTGATGGTTGTGCTAACTCATCACCATCAGGCATTACTGTGCAGGTGGAATATCCGTCACTTCAGGa                     <  1:989606/100‑1 (MQ=255)
                                                                                 gtTACCCCTCTATCCAGCTCATCCATAAATACCTGATGGTTGTGCTAACTCATCACCATCAGGCATTACTGTGCAGGTGGAATATCCGTCACTTCAGGa                     >  2:2284863/1‑99 (MQ=255)
                                                                                    aCCCCTCTATCCAGCTCATCCATAAATACCTGATGGTTGTGCTAACTCATCACCATCAGGCATTACTGTGCAGGTGGAATATCCGTCACTTCAGGATGTa                 <  2:1630661/100‑1 (MQ=255)
                                                                                    aCCCCTCTATCCAGCTCATCCATAAATACCTGATGGTTGTGCTAACTCATCACCATCAGGCATTACTGTGCAGGTGGAATATCCGTCACTTCAGGATGTa                 >  2:712431/1‑100 (MQ=255)
                                                                                     ccccTCTATCCAGCTCATCCATAAATACCTGATGGTTGTGCTAACTCATCACCATCAGGCATTACTGTGCAGGTGGAATATCCGTCACTTCAGGATGTAc                >  1:2348478/1‑100 (MQ=255)
                                                                                     ccccTCTATCCAGCTCATCCATAAATACCTGACGGTTGTGCTAACTCATCACCATCAGACCTTACTGTGCAGGTGGAATATCCGTCACTTCAGGATGTAc                >  2:348972/1‑100 (MQ=255)
                                                                                      cccTCTATCCAGCTCATCCATAAATACCTGATTGTTGTGCTAACTCATCACCATCAGGCATTACTGTGCAGGTGGAATATCCGTCACTTCAGGATGTACg               <  2:446447/100‑1 (MQ=255)
                                                                                      cccTCTATCCAGCTCATCCATAAATACCTGATGGTTGTGCTAACTCATCACCATTAGGCATTACTGTGCATGTGGCATATCCGTCACTTCAGGATGTACg               <  2:1456919/100‑1 (MQ=255)
                                                                                      cccTCTATCCAGCTCATCCATAAATACCTGATGGTTGTGCTAACTCATCACCATCAGGCATTACTGTGCAGGTGGAATATCCGTCACTTCAGGATGTACg               <  2:1502845/100‑1 (MQ=255)
                                                                                      cccTCTATCCAGCTCATCCATAAATACCTGATGGTTGTGCTAACTCATCACCATCAGGCATTACTGTGCAGGTGGAATATCCGTCACTTCAGGATGTACg               <  2:2668320/100‑1 (MQ=255)
                                                                                      cccTCTATCCAGCTCATCCATAAATACCTGATGGTTGTGCTAACTCATCACCATCAGGCATTACTGTGCAGGTGGAATATCCGTCACTTCAGGATGTACg               <  2:2558434/100‑1 (MQ=255)
                                                                                       ccTCTATCCAGCTCATCCATAAATACCTGATGGTTGTGCTAACTCATCACCATCAGGCATTACTGTGCAGGTGGAATATCCGTCACTTCAGGATGTACGt              <  2:1924157/100‑1 (MQ=255)
                                                                                       ccTCTATCCAGCTCATCCATAAATACCTGATGGTTGTGCTAACTCATCACCATCAGGCATTACTGTGCAGGTGGAATATCCGTCACTTCAGGATGTACGt              >  1:2322443/1‑100 (MQ=255)
                                                                                         tttatccagcTCATCCATAAATACCTGATGGTTGTGCTAACTCATCACCATCAGGCATTACTGTGCAGGTGGAATATCCGTCACTTCAGGATGTACGTCa            <  2:1145299‑M2/90‑1 (MQ=255)
                                                                                             tccagcTCATCCATAAATACCTGATGGTTGTGCTAACTCATCACCATCAGGCATTACTGTGCAGGTGGAATATCCGTCACTTCAGGATGTACGTCATCCg        >  1:2611425‑M2/7‑100 (MQ=255)
                                                                                              ccagcTCATCCATAAATACCTGATGGTTGTGCTAACTCATCACCATCAGGCATTACTGTGCAGGTGGAATATCCGTCACTTCAGGATGTACGTCATCCGt       >  1:1220772‑M2/6‑100 (MQ=255)
                                                                                                ngcTCATCCATAAATACCTGATGGTTGTGCTAACTCATCACCATCAGGCATTACTGTGCAGGTGGAATATCCGTCACTTCAGGATGTACGTCATCCGTgg     >  2:1729101‑M2/4‑100 (MQ=255)
                                                                                                 gcTCATCCATAAATACCTGATGGTTGTGCTAACTCATCACCATCAGGCATTACTGTGCAGGTGGAATATCCGTCACTTCAGGATGTACGTCATCCGTGGc    >  1:940723‑M2/3‑100 (MQ=255)
                                                                                                 gcTCATCCATAAATACCTGATGGTTGTGCTAACTCATCACCATCAGGCATTACTGTGCAGGTGGAATATCCGTCACTTCAGGATGTACGTCATCCGTGGc    <  2:2611407‑M2/98‑1 (MQ=255)
                                                                                                  cTCATCCATAAATACCTGATGGTTGTGCTAACTCATCACCATCAGGCATTACTGTGCAGGTGGAATATCCGTCACTTCAGGATGTACGTCATCCGTGGCg   >  2:1365990‑M2/2‑100 (MQ=255)
                                                                                                   tCATCCATAAATACCTGATGGTTGTGCTAACTCATCACCATCAGGCATTACTGTGCAGGTGGAATATCCGTCACTTCAGGATGTACGTCATCCGTGGCGa  >  1:918715/1‑100 (MQ=255)
                                                                                                   |                                                                                                   
GTTATTCAGTATCGCGGCGCGATTATCCCGCGTGAGGCGATGCCAGCGTAAACGCAGCATATGCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCATCCATAAATACCTGATGGTTGTGCTAACTCATCACCATCAGGCATTACTGTGCAGGTGGAATATCCGTCACTTCAGGATGTACGTCATCCGTGGCGA  >  NC_000913/3680298‑3680496

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.