New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 758452 =NA (NA)7 (0.080) 4/164 NT NA noncoding (44/118 nt) RIP67 (repetitive extragenic palindromic) element; contains 3 REP sequences and 1 IHF site RIP67 (repetitive extragenic palindromic) element; contains 3 REP sequences and 1 IHF site
?NC_000913 = 4554508 NA (NA)noncoding (4/34 nt) REP346 (repetitive extragenic palindromic) element; contains 1 REP sequences REP346 (repetitive extragenic palindromic) element; contains 1 REP sequences

Only 100 of 142 total aligned reads displayed.

CGCGCGCCATCGGCCATATCAAGTCGATGTTGTTGCAACGTAATGCGTAAACCGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAACCAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAGTCATTACCCGTAGGCCTGATAAGCGCAGCGCATCAGGCGTAACAAAGAAATGCAGGAAATCTT  >  NC_000913/758356‑758551
                                                                                                |                                                                                                   
cgcgcgCCATCGGCCATATCAAGTCGATGTTGTTGCAACGTAATGCGTAAACCGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAACCAGTGCCg                                                                                                  <  2:178738/100‑1 (MQ=255)
cgcgcgCCATCGGCCATATCAAGTCGATGTTGTTGCAACGTAATGCGTAAACCGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAACCAGTGCCg                                                                                                  >  2:337698/1‑100 (MQ=255)
cgcgcgCCATCGGCCATATCAAGTCGATGTTGTTGCAACGTAATGCGTAAACCGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAACCAGTGCCg                                                                                                  >  1:346726/1‑100 (MQ=255)
  cgcgcCATCGGCCATATCAAGTCGATGTTGTTGCAACGTAATGCGTAAACCGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAACCAGTGCCGGa                                                                                                <  1:2038770/100‑1 (MQ=255)
   gcgcCATCGGCCATATCAAGTCGATGTTGTTGCAACGTAATGCGTAAACCGTAGGCATGATCAGACGCGACAGCGTAGAATCAAGCAACAAGTGACGGAt                                                                                               >  1:2293928/1‑100 (MQ=255)
   gcgacctCGGCCATATCAAGTCGATGTTGTTGCAACGTAATGCGTAAACCGAAGGCCTGAAAAGACGCGCAAACACCGCATCAGGCAACCAGTGc                                                                                                    >  2:2619180/7‑95 (MQ=255)
      tcttccgatctatCAAGTCGATGTTGTTGCAACGTAATGCGTAAACCGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAACCAGTGCCGGATgcg                                                                                            <  2:31512/90‑1 (MQ=255)
      ccATCGGCCATATCAAGTCGATGTTGTTGCAACGTAATGCGTAAACCGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAACCAGTGCCGGATgcg                                                                                            >  1:405347/1‑100 (MQ=255)
      ccATCGGCCATATCAAGTCGATGTTGTTGCAACGTAATGCGTAAACCGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAACCAGTGCCGGATgcg                                                                                            >  1:670514/1‑100 (MQ=255)
         tCGGCCATATCAAGTCGATGTTGTTGCAACGTAATGCGTAAACCGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAACCAGTGCCGGATgcggcg                                                                                         <  1:1967353/100‑1 (MQ=255)
           ggCCATATCAAGTCGATGTTGTTGCAACGTAATGCGTAAACCGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAACCAGTGCCGGATGCGGCGTg                                                                                       >  1:2312068/1‑100 (MQ=255)
           ggCCATATCAAGTCGATGTTGTTGCAACGTAATGCGTAAACCGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAACCAGTGCCGGATGCGGCGTg                                                                                       <  1:1908905/100‑1 (MQ=255)
               atatCAAGTCGATGTTGTTGCAACGTAATGCGTAAACCGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAACCAGTGCCGGATGCGGCGTGAACg                                                                                   <  1:561046/100‑1 (MQ=255)
                tatCAAGTCGATGTTGTTGCAACGTAATGCGTAAACCGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAACCAGTGCCGGATGCGGCGTGAACGc                                                                                  >  1:1394411/1‑100 (MQ=255)
                 atCAAGTCGATGTTGTTGCAACGTAATGCGTAAACCGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAACCAGTGCCGGATGCGGCGTGAACGcc                                                                                 <  1:2093104/100‑1 (MQ=255)
                 atCAAGTCGATGTTGTTGCAACGTAATGCGTAAACCGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAACCAGTGCCGGATGCGGCGTGAACGcc                                                                                 <  1:205944/100‑1 (MQ=255)
                 atCAAGTCGATGTTGTTGCAACGTAATGCGTAAACCGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAACCAGTGCCGGATGCGGCGTGAACGcc                                                                                 >  1:82357/1‑100 (MQ=255)
                  tCAAGTCGATGTTGTTGCAACGTAATGCGTAAACCGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAACCAGTGCCGGATGCGGCGTGAACGCCt                                                                                <  1:753370/100‑1 (MQ=255)
                    aaGTCGATGTTGTTGCAACGTAATGCGTAAACCGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAACCAGTGCCGGATGCGGCGTGAACGCCTTa                                                                              <  1:1476744/100‑1 (MQ=255)
                    aaGTCGATGTTGTTGCAACGTAATGCGTAAACCGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAACCAGTGCCGGATGCGGCGTGAACGCCTTa                                                                              >  2:659841/1‑100 (MQ=255)
                    aaGTCGATGTTGTTGCAACGTAATGCGTAAACCGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAACCAGTGCCGGATGCGGCGTGAACGCCTTa                                                                              >  1:248930/1‑100 (MQ=255)
                     aGTCGATGTTGTTGCAACGTAATGCGTAAACCGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAACCAGTGCCGGATGCGGCGTGAACGCCTTAt                                                                             >  2:584001/1‑100 (MQ=255)
                       cctgtacgtgccaacttccagtgctaatggtatagtttgagattaacgggggccgtaaaattgcccgttgtagGCCGGATGCGGCGTGAACGCCTTATcc                                                                           >  1:2036706‑M1/74‑100 (MQ=255)
                       cctgtacgtgccaacttccagtgctaatggtatagtttaagattaacggtggccgtaaaattgcccgttgtagGCCGGATGCGGCGTGAACGCCTTATcc                                                                           >  1:2230442‑M1/74‑100 (MQ=255)
                        ctgtacgtgccaacttccagtgctaatggtatagtttgagattaacgggggccgtaaaattgcccgttgtagGCCGGATGCGGCGTGAACGCCTTATCCg                                                                          >  1:1452291‑M1/73‑100 (MQ=255)
                        cGATGTTGTTGCAACGTAATGCGTAAACCGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAACCAGTGCCGGATGCGGCGTGAACGCCTTATCCg                                                                          >  1:1619318/1‑100 (MQ=255)
                         gATGTTGTTGCAACGTAATGCGTAAACCGTAGGCCTGTTAAGACGCGCAAGCGTCGCATCAGGCAACCAGTGCCGGATGCGGCGTGAACGCCTTATCCgg                                                                         <  1:1729907/100‑1 (MQ=255)
                         gATGTTGTTGCAACGTAATGCGTAAACCGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAACCAGTGCCGGATGCGGCGTGAACGCCTTATCCgg                                                                         <  2:2588111/100‑1 (MQ=255)
                         gATGTTGTTGCAACGTAATGCGTAAACCGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAACCAGTGCCGGATGCGGCGTGAACGCCTTATCCgg                                                                         <  1:2464785/100‑1 (MQ=255)
                          aTGTTGTTGCAACGTAATGCGTAAACCGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAACCAGTGCCGGATGCGGCGTGAACGCCTTATCCGGc                                                                        <  1:1916241/100‑1 (MQ=255)
                           tgttgtTGCAACGTAATGCGTAAACCGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAACCAGTGCCGGATGCGGCGTGAACGCCTTATCCGGcc                                                                       >  1:717018/1‑100 (MQ=255)
                           tacgtgccaacttccagtgctaatggtatagtttgagattaacgggggccgtaaaattgcccgttgtagGCCGGATGCGGCGTGAACGCCTTATCCGGcc                                                                       >  1:2305939‑M1/70‑100 (MQ=255)
                            gttgttGCAACGTAATGCGTAAACCGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAACCAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCt                                                                      <  2:657378/100‑1 (MQ=255)
                            acgtgccaacttccagtgctaatggtatagtttgagattaacgggggccgtaaaattgcccgttgtagGCCGGATGCGGCGTGACCGCCTTATCCGGcc                                                                       >  2:2448695‑M1/69‑99 (MQ=255)
                             ttgttgCAACGTAATGCGTAAACCGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAACCAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTa                                                                     >  2:2634059/1‑100 (MQ=255)
                             ttgttgCAACGTAATGCGTAAACCGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAACCAGTGCCGGATAAGGCGTTCACGCCGCATCCGGcact                                                                     <  1:1111255/100‑4 (MQ=25)
                              tgttgCAACGTAATGCGTAAACCGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAACCAGGGCCGGATAAGGCGTTCACGCCGCATCCGGcactg                                                                    <  2:1053402/100‑5 (MQ=21)
                              gtgccaacttacagagctaatggtatagtttgagattaacgggggccggaaaattgcccgttgtagGCCGGATGCGGCGTGAACGCCTTATCCGGCCTa                                                                     >  2:803681‑M1/67‑99 (MQ=255)
                               gttgCAACGTAATGCGTAAACCGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAACCAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACa                                                                   >  2:1952903/1‑100 (MQ=255)
                                ttgCAACGTAATGCGTAAACCGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAACCAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACaa                                                                  >  1:2302273/1‑100 (MQ=255)
                                 tgCAACGTAATGCGTAAACCGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAACCAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAg                                                                 >  1:2659548/1‑100 (MQ=255)
                                 tgCAACGTAATGCGTAAACCGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAACCAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAg                                                                 >  2:2390035/1‑100 (MQ=255)
                                 tgCAACGTAATGCGTAAACCGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAACCAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAg                                                                 <  1:1496254/100‑1 (MQ=255)
                                 tgCAACGTAATGCGTAAACCGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAACCAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAg                                                                 >  2:557905/1‑100 (MQ=255)
                                   cAACGTAATGCGTAAACCGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAACCAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAGTc                                                               <  2:1969935/100‑1 (MQ=255)
                                     aCGTAATGCGTAAACCGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAACCAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAGTCAt                                                             <  1:429368/100‑1 (MQ=255)
                                     aCGTAATGCGTAAACCGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAACCAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAGTCAt                                                             <  1:429536/100‑1 (MQ=255)
                                      cGTAATGCGTAAACCGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAACCAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAGTCAtt                                                            <  2:1394405/100‑1 (MQ=255)
                                         aaTGCGTAAACCGTAGTCCTGAGAAGGCGCGCAAGCGCCGCATCATGCAACCAGTGCCGGATGCGGCGTCACCGCCTTATCCGGCCTACAAGTCATTAcc                                                         <  2:2380540/100‑1 (MQ=25)
                                             cGTAAACCGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAACCAGTGCCGGATGCGGCGGGAACGCCTTATCCGGCCTACAAGTCATTACCCGTa                                                     >  1:1877576/1‑100 (MQ=255)
                                              gTAAACCGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAACCAGTGCCGGCTGCGGCGTGAACGCCTTATCCGGCCTACAAGGCATTACCCGTa                                                     >  2:2000937/1‑99 (MQ=255)
                                              gTAAACCGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAACCAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAGTCATTACCCGTAg                                                    >  2:1900388/1‑100 (MQ=255)
                                               tAAACCGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAACCAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAGTCATTACCCGTAgg                                                   <  1:25071/100‑1 (MQ=255)
                                               tAAACCGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAACCAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAGTCATTACCCGTAgg                                                   <  1:1145807/100‑1 (MQ=255)
                                                 aaCCGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAACCAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAGTCATTACCCGTAGGcc                                                 <  2:2711831/100‑1 (MQ=255)
                                                 aaCCGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAACCAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAGTCATTACCCGTAGGcc                                                 >  1:1077017/1‑100 (MQ=255)
                                                  aCCGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAACCAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAGTCATTACCCGTAGGCCt                                                >  2:571335/1‑100 (MQ=255)
                                                  aCCGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAACCAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAGTCATTACCCGTAGGCCt                                                <  1:2437729/100‑1 (MQ=255)
                                                      tAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAACCAGTGTCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAGTCATTACCCGTAGGCCTGATa                                            <  1:2013852/100‑1 (MQ=255)
                                                      tAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAACCAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAGTCATTACCCGTAGGCCTGATa                                            <  1:1631428/100‑1 (MQ=255)
                                                        ggCCTGATAAGACGCGCAAGCGTCGCATCAGGCAACCAGTGCCGGATGCGGCGTGAACGCCTTATCCCGCCTACAGGTCATTACCCGTAGGCCTGATaa                                           >  2:345630/1‑99 (MQ=255)
                                                         gCCTGATAAGACGCGCAAGCGTCGCATCAGGCAACCAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAGTCATTACCCGTAGGCCTGATAagc                                         <  2:417689/100‑1 (MQ=255)
                                                         gCCTGATAAGACGCGCAAGCGTCGCATCAGGCAACCAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAGTCATTACCCGTAGGCCTGATAagc                                         >  2:2190237/1‑100 (MQ=255)
                                                             gATAAGACGCGCAAGCGTCGCATCAGGCAACCAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAGTCATTACCCGTAGGCCTGATAagcgcag                                     >  1:162722/1‑100 (MQ=255)
                                                              aTAAGACGCGCAAGCGTCGCATCAGGCAACCAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAGTCATTACCCGTAGGCCTGATAagcgcagc                                    >  1:46425/1‑100 (MQ=255)
                                                               tAAGACGCGCAAGCGTCGCATCAGGCAACCAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAGTCATTACCCGTAGGCCTGATAagcgcagcg                                   <  1:1064603/100‑1 (MQ=255)
                                                                  gACGCGCAAGCGTCGCATCAGGCAACCAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAGTCATTACCCGTAGGCCTGATAAGCGCAGCGCAt                                <  2:32318/100‑1 (MQ=255)
                                                                  gACGCGCAAGCGTCGCATCAGGCAACCAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAGTCATTACCCGTAGGCCTGATAAGCGCAGCGCAt                                >  1:2316326/1‑100 (MQ=255)
                                                                   aCGCGCAAGCGTCGCATCAGGCAACCAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAGTCATTACCCGTAGGCCTGATAAGCGCAGCGCATc                               <  2:2429930/100‑1 (MQ=255)
                                                                    cgcgCAAGCGTCGCATCAGGCAACCAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAGTCATTACCCGTAGGCCTGATAAGCGCAGCGCATCa                              >  1:2394750/1‑100 (MQ=255)
                                                                     gcgcAAGCGTCGCATCAGGCAACCAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAGTCATTACCCGTAGGCCTGATAAGCGCAGCGCATCAg                             <  2:499115/100‑1 (MQ=255)
                                                                     gcgcAAGCGTCGCATCAGGCAACCAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAGTCATTACCCGTAGGCCTGATAAGCGCAGCGCATCAg                             <  1:2547661/100‑1 (MQ=255)
                                                                     gcgcAAGCGTCGCATCAGGCAACCAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAGTCATTACCCGTAGGCCTGATAAGCGCAGCGCATCAg                             <  2:2261064/100‑1 (MQ=255)
                                                                      cgcAAGCGTCGCATCAGGCAACCAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAGTCATTACCCGTAGGCCTGATAAGCGCAGCGCATCAgg                            >  2:1048205/1‑100 (MQ=255)
                                                                      cgcAAGCGTCGCATCAGGCAACCAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAGTCATTACCCGTAGGCCTGATAAGCGCAGCGCATCAgg                            >  2:2248262/1‑100 (MQ=255)
                                                                       gcATGCGTCGCATTAGGCAACCAGGGCCGGATGCGGCGTGAACGGCTTATCCGGCCTACAAGGCATTACCGGTAGGCCTCAGAAGCGCAGAGCCTCAGGc                           <  2:1571511/100‑1 (MQ=21)
                                                                        cAAGCGTCGCATCAGGCAACCAGTGCCGGATGCGGCGTGAACGCCTTATCAGGCCTACAAGTCATTACCCGTAGGCCTGATAAGCGCAGCGCATCAGGCg                          <  1:1425690/100‑1 (MQ=255)
                                                                          aGCGTCGCATCAGGCAACCAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAGTCATTACCCGTAGGCCTGATAAGCGCAGCGCATCAGGCGTa                        <  1:470715/100‑1 (MQ=255)
                                                                           gCGTCGCATCAGGCAACCAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAGTCATTACCCGTAGGCCTGATAAGCGCAGCGCATCAGGCGTa                        <  2:1203965/99‑1 (MQ=255)
                                                                             gTCGCATCAGGCAACCAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAGTCATTACCCGTAGGCCTGATAAGCGCAGCGCATCAGGCGTAACa                     <  1:907829/100‑1 (MQ=255)
                                                                              tCGCATCAGGCAACCAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAGTCATTACCCGTAGGCCTGATAAGCGCAGCGCATCAGGCGTAACaa                    <  1:2162301/100‑1 (MQ=255)
                                                                               cGCATCAGGCAACCAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAGTCATTACCCGTAGGCCTGATAAGCGCAGCGCATCAGGCGTAACaaa                   >  1:1722228/1‑100 (MQ=255)
                                                                                gCATCAGGCAACCAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAGTCATTACCCGTAGGCCTGATAAGCGCAGCGCATCAGGCGTAACAAAg                  >  1:1830722/1‑100 (MQ=255)
                                                                                gCATCAGGCAACCAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAGTCATTACCCGTAGGCCTGATAAGCGCAGCGCATCAGGCGTAACAAAg                  >  1:2343760/1‑100 (MQ=255)
                                                                                gCATCAGGCAACCAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAGTCATTACCCGTAGGCCTGATAAGCGCAGCGCATCAGGCGTAACAAAg                  >  1:2276947/1‑100 (MQ=255)
                                                                                 cATCAGGCAACCAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAGTCATTACCCGTAGGCCTGATAAGCGCAGCGCATCAGGCGTAACAAAGa                 >  2:1821661/1‑100 (MQ=255)
                                                                                 cATCAGGCAACCAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAGTCATTACCCGTAGGCCTGATAAGCGCAGCGCATCAGGCGTAACAAAGa                 >  1:2077811/1‑100 (MQ=255)
                                                                                  aTCAGGCAACCAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAGTCATTACCCGTAGGCCTGATAAGCGCAGCGCATCAGGCGTAACAAAGaa                <  1:140776/100‑1 (MQ=255)
                                                                                   tCAGGCAACCAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAGTCATTACCCGTAGGCCTGATAAGCGCAGCTCATCAGGCGTAACAAAGaaa               <  1:2712461/100‑1 (MQ=255)
                                                                                    cAGGCAACCAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAGTCATTACCCGTAGGCCTGATAAGCGCAGCGCATCAGGCGTAACAAAGAAAt              <  1:104850/100‑1 (MQ=255)
                                                                                     aGGCAACCAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAGTCATTACCCGTAGGCCTGATAAGCGCAGCGCATCAGGCGTAACAAAGAAATg             <  1:1464400/100‑1 (MQ=255)
                                                                                     aGGCAACCAGTGCCGGATGCGGCGTGAACGCCGTATCCGTCCTACAAGTCATTACCCGTAGGCCTGATAAGCGCAGCGCATCAGGCGTAACAAAGAAATg             <  2:1927081/100‑1 (MQ=255)
                                                                                      gtcAACCAGTGCCGGATGCGGCGTGAACGCCGTATCCGGCCTGCAAGTCATTACCCGTAGGCCTGATAAGCGCAGCGCATCAGGCGTAACAAAGAAATGc            >  1:1859577/3‑100 (MQ=255)
                                                                                      ggCAACCAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAGTCATTACCCGTAGGCCTGATAAGCGCAGCGCATCAGGCGTAACAAAGAAATGc            <  2:1248763/100‑1 (MQ=255)
                                                                                      ggCAACCAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAGTCATTACCCGTAGGCCTGATAAGCGCAGCGCATCAGGCGTAACAAAGAAATGc            >  1:398955/1‑100 (MQ=255)
                                                                                      ggCAACCAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAGTCATTACCCGTAGGCCTGATAAGCGCAGCGCATCAGGCGTAACAAAGAAATGc            >  1:998436/1‑100 (MQ=255)
                                                                                        cAACCAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAGTCATTACCCGTAGGCCTGATAAGCGCAGCGCATCAGGCGTAACAAAGAAATGCAg          <  2:2659530/100‑1 (MQ=255)
                                                                                             aGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAGTCATTACCCGTAGGCCTGATAAGCGCAGCGCATCAGGCGTAACAAAGAAATGCAGGAAAt     <  2:387466/100‑1 (MQ=255)
                                                                                               gGCCGGATAAGGCGTTCACGCCGCATCCGGCCTACAAGTCATTACCCGTAGGCCTGATAAGCGCAGCGCCTCAGGCGTAACAAAGAAATGCAGGAAATCt   <  2:856711‑M1/99‑1 (MQ=255)
                                                                                                GCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAGTCATTACCCGTAGGCCTGATAAGCGCAGCGCATCAGGCGTAACAAAGAAATGCAGGAAATCtt  >  1:2591826‑M1/1‑100 (MQ=255)
                                                                                                |                                                                                                   
CGCGCGCCATCGGCCATATCAAGTCGATGTTGTTGCAACGTAATGCGTAAACCGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAACCAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAGTCATTACCCGTAGGCCTGATAAGCGCAGCGCATCAGGCGTAACAAAGAAATGCAGGAAATCTT  >  NC_000913/758356‑758551

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.