New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 1735983 =NA (NA)8 (0.090) 7/166 NT NA noncoding (1/74 nt) REP128 (repetitive extragenic palindromic) element; contains 2 REP sequences REP128 (repetitive extragenic palindromic) element; contains 2 REP sequences
?NC_000913 1736008 = NA (NA)noncoding (26/74 nt) REP128 (repetitive extragenic palindromic) element; contains 2 REP sequences REP128 (repetitive extragenic palindromic) element; contains 2 REP sequences

Only 100 of 126 total aligned reads displayed.

TGCACGTCCTGGCTATCTGGAGCACTTCTGGGCGCTGGTGAACTGGGAATTCGTAGCGAAAAATCTCGCTGCATAATAACTGATGGCAAATGCAGCATTGCCTGAAGCGCTACGCTTATCAGGCCTACGCGGATCATCGATGTAGGTCGGATAAGGCACTCGCCGCATCCGGCAAGATAAATCGCACGTTGTCAGCAAC  >  NC_000913/1735884‑1736082
                                                                                                   |                                                                                                   
tGCACGTCCTGGCTATCTGGAGCACTTCTGGGCGCTGGTGAACTGGGAATTCGTAGCGAAAAATCTCGCTGCATAATAACTGATGGCAAATGCAGCATTg                                                                                                     >  1:797978/1‑100 (MQ=255)
agaaggataaccttctgcgttacagttgctgacaacgtgcgatttatcttgccggatgcggcgagtgccttatccgacctacatcgatgatccgcgtagg                                                                                                     >  1:675191‑M1/100‑100 (MQ=255)
 gaaggttatccttctgcgttacagttgctgacaacgtgcgatttatcttgccggatgcggcgagtgccttatccgacctacatcgatgatccgcgtagGc                                                                                                    <  2:2598914‑M1/2‑1 (MQ=255)
 gCACGTCCTGGCTATCTGGAGCACTTCTGGGCGCTGGTGAACTGGGAATTCGTAGCGAAAAATCTCGCTGCATAATAACTGATGGCAAATGCAGCATTGc                                                                                                    >  2:1510848/1‑100 (MQ=255)
  cgagTCCTGGCTATCTGGAGAACTTCTGGGCGCTGGTGAAGTGGGAATTCGTAGCGAAAAATCTCGCTGCATAATAACTGATGGCAATTGCAGCATTGcc                                                                                                   <  2:818367/97‑1 (MQ=255)
  cACGTCCTGGCTATCTGGAGCACTTCTGGGCGCTGGTGAACTGGGAATTCGTAGCGAAAAATCTCGCTGCATAATAACTGATGGCAAATGCAGCATTGcc                                                                                                   <  1:1394710/100‑1 (MQ=255)
   aggataaccttctgcgttacagttgctgacaacgtgcgatttatcttgccggatgcggcgagtgccttatccgacctacatcgatgatccgcgtagGCCt                                                                                                  <  2:1636490‑M1/4‑1 (MQ=255)
    ggataaccttctgcgttacagttgctgacaacgggcgatttatcttgacggatgcggcgagtaccttatccgacatacatcgatgatccgcgtagg                                                                                                     <  2:1728319‑M1/1‑1 (MQ=255)
     gTCCTGGCTATCTGGAGCACTTCTGGGCGCTGGTGAACTGGGAATTCGTAGCGAAAAATCTCGCTGCATAATAACTGATGGCAAATGCAGCATTGCCTGa                                                                                                >  2:2637780/1‑100 (MQ=255)
       ccTGGCTATCTGGAGCACTTCTGGGCGCTGGTGAACTGGGAATTCGTAGCGAAAAATCTCGCTGCATAATAACTGATGGCAAATGCAGCATTGCCTGAAg                                                                                              <  2:2060736/100‑1 (MQ=255)
        cTGGCTATCTGGAGCACTTCTGGGCGCTGTTGAACTGGGAATTCGTAGCGAAAAATCTCGCTGCATAATAACTGATGGCAAATGCAGCATTGCCTGAAgc                                                                                             <  2:344432/100‑1 (MQ=255)
         tGGCTACCTGGACCACATCTGGGCGCTGCTGAACGGGGAATTCGTAGCGCAAAATCTCGCTGCATAATAACTGATGGCAAATGCACCATTGCCt                                                                                                  >  2:166502/1‑94 (MQ=255)
                cTGGAGCACTTCTGGGCGCTGGTGAACTGGGAATTCGTAGCGAAAAATCTCGCTGCATAATAACTGATGGCAAATGCAGCATTGCCTGAAGCGCTACGCt                                                                                     <  2:2225841/100‑1 (MQ=255)
                cTGGAGCACTTCTGGGCGCTGGTGAACTGGGAATTCGTAGCGAAAAATCTCGCTGCATAATAACTGATGGCAAATGCAGCATTGCCTGAAGCGCTACGCt                                                                                     <  2:1631462/100‑1 (MQ=255)
                 tGGAGCACTTCTGGGCGCTGGTGAACTGGGAATTCGTAGCGAAAAATCTCGCTGCATAATAACTGATGGCAAATGCAGCATTGCCTGAAGCGCTACGCtt                                                                                    >  2:2070545/1‑100 (MQ=255)
                  ggAGCACTTCTGGGCGCTGGTGAACTGGGAATTCGTAGCGAAAAATCTCGCTGCATAATAACTTATGGCAAATGCAGCATTGCCTGAAGCGCTACGCTTa                                                                                   <  1:1935962/100‑1 (MQ=255)
                  ggAGCACTTCTGGGCGCTGGTGAACTGGGAATTCGTAGCGAAAAATCTCGCTGCATAATAACTGATGGCAAATGCAGCATTGCCTGAAGCGCTACGCTTa                                                                                   >  2:1329127/1‑100 (MQ=255)
                  ggAGCACTTCTGGGCGCTGGTGAACTGGGAATTCGTAGCGAAAAATCTCGCTGCATAATAACTGATGGCAAATGCAGCATTGCCTGAAGCGCTACGCTTa                                                                                   >  2:1142116/1‑100 (MQ=255)
                  ggAGCACTTCTGGGCGCTGGTGAACTGGGAATTCGTAGCGAAAAATCTCGCTGCATAATAACTGATGGCAAATGCAGCATTGCCTGAAGCGCTACGCTTa                                                                                   >  2:340181/1‑100 (MQ=255)
                  ggAGCACTTCTGGGCGCTGGTGAACTGGGAATTCGTAGCGAAAAATCTCGCTGCATAATAACTGATGGCAAATGCAGCATTGCCTGAAGCGCTACGCTTa                                                                                   >  1:1096321/1‑100 (MQ=255)
                  ggAGCACTTCTGGGCGCTGGTGAACTGGGAATTCGTAGCGAAAAATCTCGCTGCATAATAACTGATGGCAAATGCAGCATTGCCTGAAGCGCTACGCTTa                                                                                   >  1:1804653/1‑100 (MQ=255)
                    aGCACTTCTGGGCGCTGGTGAACTGGGAATTCGTAGCGAAAAATCTCGCTGCATAATAACTGATGGCAAATGCAGCATTGCCTGAAGCGCTACGCTTATc                                                                                 >  1:1581919/1‑100 (MQ=255)
                    aGCACTTCTGGGCGCTGGTGAACTGGGAATTCGTAGCGAAAAATCTCGCTGCATAATAACTGATGGCAAATGCAGCATTGCCTGAAGCGCTACGCTTATc                                                                                 >  2:120340/1‑100 (MQ=255)
                    aGCACTTCTGGGCGCTGGTGAACTGGGAATTCGTAGCGAAAAATCTCGCTGCATAATAACTGATGGCAAATGCAGCATTGCCTGAAGCGCTACGCTTATc                                                                                 <  1:2591598/100‑1 (MQ=255)
                     gCACTTCTGGGCGCTGGTGAACTGGGAATTCGTAGCGAAAAATCTCGCTGCATAATAACTGATGGCAAATGCAGCATTGCCTGAAGCGCTACGCTTATCa                                                                                >  1:1453527/1‑100 (MQ=255)
                       agttgctgacaacgtgcgatttatcttgccggatgcggcgagtgccttatccgacctacatcgatgatccgcgtagGCCTGAAGCGCTACGCTTATCAgg                                                                              >  2:713809‑M1/77‑100 (MQ=255)
                       agttgctgacaacgtgcgatttatcttgccggatgcggcgagtgccgtatccgacctacatcgatgatccgcgtagGCCTGAAGCGCTACGCTTATCAgg                                                                              >  2:2224934‑M1/77‑100 (MQ=255)
                        gttgctgacaacgtgcgatttatcttgccggatgcggcgagtgccttatccgacctacatcgatgatccgcgtagGCCTGAAGCGCTACGCTTATCAGGc                                                                             >  1:1199137‑M1/76‑100 (MQ=255)
                        cTTCTGGGCGCTGGTGAACTGGGAATTCGTAGCGAAAAATCTCGCTGCATAATAACTGATGGCAAATGCAGCATTGCCTGAAGCGCTACGCTTATCAGGc                                                                             >  1:1403896/1‑100 (MQ=255)
                        cTTCTGGGCGCTGGTGAACTGGGAATTCGTAGCGAAAAATCTCGCTGCATAATAACTGATGGCAAATGCAGCATTGCCTGAAGCGCTACGCTTATCAGGc                                                                             >  2:159366/1‑100 (MQ=255)
                        cTTCTGGGCGCTGGTGAACTGGGAATTCGTAGCGAAAAATCTCGCTGCATAATAACTGATGGCAAATGCAGCATTGCCTGAAGCGCTACGCTTATCAGGc                                                                             >  1:323900/1‑100 (MQ=255)
                        cTTCGGGGCGTTGGTGAACGGAGAATTCGTAGCGAAAAATCTCGCTGCATAATAACTGAGGGCAAATGCAGCATTGCCTGAAGCGCTACGCGTATc                                                                                 <  2:2437023/96‑1 (MQ=255)
                         ttCTGGGCGCTGGTGAACTGGGAATTCGTAGCGAAAAATCTCGCTGCATAATAACTGATGGCAAATGCAGCATTGCCTGAAGCGCTACGCTTATCAGGcc                                                                            <  2:1765224/100‑1 (MQ=255)
                           gctgacaacgtgcgatttatcttgccggatgcggcgagtgccttatccgacctacatcgatgatccgcgtagGCCTGAAGCGCTACGCTTATCAGGCCTa                                                                          >  1:1056106‑M1/73‑100 (MQ=255)
                            tGGGCGCTGGTGAACTGGGAATTCGTAGCGAAAAATCTCGCTGCATAATAACTGATGGCAAATGCAGCATTGCCTGAAGCGCTACGCTTATCAGGCCTAc                                                                         <  2:858001/100‑1 (MQ=255)
                             gggCGCTGGTGAACTGGGAATTCGTAGCGAAAAATCTCGCTGCATAATAACTGATGGCAAATGCAGCATTGCCTGAAGCGCTACGCTTATCAGGCCTAcg                                                                        >  1:1874822/1‑100 (MQ=255)
                              gacaacgtgcgatttatcttgccggatacggcgagtgccttatccgacctacatcgatgatccgcgtagGCCTGAAGCGCTACGCTTATCAGGCCTAcgc                                                                       >  2:444907‑M1/70‑100 (MQ=255)
                               gcgcTGGTGAACTGGGAATTCGTAGCGAAAAATCTCGCTGCATAATAACTGATGGCAAATGCAGCATTGCCTGAAGCGCTACGCTTATCAGGCCTAcgcg                                                                      <  1:2206433/100‑1 (MQ=255)
                               acaacgtgcgatttatcttgccggatgcggcgagtgccttatccgacctacatcgatgatccgcgtagGCCTGAAGCGCTACGCTTATCAGGCCTAcgcg                                                                      >  1:2059149‑M1/69‑100 (MQ=255)
                                cgcTGGTGAACTGGGAATTCGTAGCGAAAAATCTCGCTGCATAATAACTGATGGCAAATGCAGCATTGCCTGAAGCGCTACGCTTATCAGGCCTACGCgg                                                                     >  1:1388651/1‑100 (MQ=255)
                                 gcTGGTGAACTGGGAATTCGTAGCGAAAAATCTCGCTGCATAATAACTGATGGCAAATGCAGCATTGCCTGAAGCGCTACGCTTATCAGGCCTACGCGGa                                                                    >  1:2709159/1‑100 (MQ=255)
                                  cTGGTGAACTGGGAATTCGTAGCGAAAAATCTCGCTGCATAATAACTGATGGCAAATGCAGCATTGCCTGAAGCGCTACGCTTATCAGGCCTACGCGGat                                                                   <  2:1185031/100‑1 (MQ=255)
                                  cTGGTGAACTGGGAATTCGTAGCGAAAAATCTCGCTGCATAATAACTGATGGCAAATGCAGCATTGCCTGAAGCGCTACGCTTATCAGGCCTACGCGGa                                                                    >  1:2673568/1‑99 (MQ=255)
                                   tGGTGAACTGGGAATTCGTAGCGAAAAATCTCGCTGCATAATAACTGATGGCAAATGCAGCATTGCCTGAAGCGCTACGCTTATCAGGCCTACGCGGatc                                                                  <  1:461380/100‑1 (MQ=255)
                                      tGAACTGGGAATTCTTAGCGAAAAATCTCGCTGCATAATTACTGATGGCAAATGCAGGATTGCCTGAAGCGCTACGCTTTCAGGCCTACGCGGATCATCg                                                              <  2:2451828/100‑1 (MQ=255)
                                      tGAACTGGGAATTCGTAGCGAAAAATCTCGCTGCATAATAACTGATGGCAAATGCAGCATTGCCTGAAGCGCTACGCTTATCAGGCCTACGCGGatcatc                                                               <  1:2358451/100‑1 (MQ=255)
                                      tGAACTGGGAATTCGTAGCGAAAAATCTCGCTGCATAATAACTGATGGCAAATGCAGCATTGCCTGAAGCGCTACGCTTATCAGGCCTACGCGGatcatc                                                               <  2:310480/100‑1 (MQ=255)
                                      tGAACTGGGAATTCGTAGCGAAAAATCTCGCTGCATAATAACTGATGGCAAATGCAGCATTGCCTGAAGCGCTACGCTTATCAGGCCTACGCGGatcatc                                                               <  1:32283/100‑1 (MQ=255)
                                       gAACTGGGAATTCGTAGCGAAAAATCTCGCTGCATAATAACTGATGGCAAATGCAGCATTGCCTGAAGCGCTACGCTTATCAGGCCTACGCGGATCATCg                                                              <  1:1142121/100‑1 (MQ=255)
                                         aCTGGGAATTCGTAGCGAAAAATCTCGCTGCATAATAACTGATGGCAAATGCAGCATTGCCTGAAGCGCTACGCTTATCAGGCCTACGCGGATCATCGAt                                                            >  2:1559728/1‑100 (MQ=255)
                                          tttatcttgccggatgcggcgagtgccttatccgacctacatcgatgatccgcgtagGCCTGAAGCGCTACGCTTATCAGGCCTACGCGGATCATCGATg                                                           >  1:2046316‑M1/58‑100 (MQ=255)
                                          cTGGGAATTCGTAGCGAAAAATCTCGCTGCATAATAACTGATGGCAAATGCAGCATTGCCTGAAGCGCTACGCTTATCAGGCCTACGCGGATCATCGATg                                                           <  1:2217777/100‑1 (MQ=255)
                                          cTGGGAATTCGTAGCGAAAAATCTCGCTGCATAATAACTGATGGCAAATGCAGCATTGCCTGAAGCGCTACGCTTATCAGGCCTACGCGGATCATCGATg                                                           >  2:762209/1‑100 (MQ=255)
                                            gggAATTCGTAGCGAAAAATCTCGCTGCATAATAACTGATGGCAAATGCAGCATTGCCTGAAGCGCTACGCTTATCAGGCCTACGCGGATCATCGATGTa                                                         >  1:1685227/1‑100 (MQ=255)
                                            gggAATTCGTAGCGAAAAATCTCGCTGCATAATAACTGATGGCAAATGCAGCATTGCCTGAAGCGCTACGCTTATCAGGCCTACGCGGATCATCGATGTa                                                         >  2:829981/1‑100 (MQ=255)
                                             ggAATTCGTAGCGAAAAATCTCGCTGCATAATAACTGATGGCAAATGCAGCATTGCCTGAAGCGCTACGCTTATCAGGCCTACGCGGATCATCGATGTAg                                                        >  2:2395895/1‑100 (MQ=255)
                                             ggAATTCGTAGCGAAAAATCTCGCTGCATAATAACTGATGGCAAATGCAGCATTGCCTGAAGCGCTACGCTTATCAGGCCTACGCGGATCATCGATGTAg                                                        <  1:2392179/100‑1 (MQ=255)
                                             ggAATTCGTAGCGAAAAATCTCGCTGCATAATAACTGATGGCAAATGCAGCATTGCCTGAAGCGCTACGCTTATCAGGCCTACGCGGATCATCGATGTAg                                                        <  1:2223180/100‑1 (MQ=255)
                                              taaTCCGAAGCGAAAAATCTCGCTGCATAATAACTGAAGGCAAATGCAGCACTGCCTGAAGTTCTACTCTTATCACGCCTACGCGGATCATCg                                                              <  2:246174/92‑1 (MQ=255)
                                                aTTCGTAGCGAAAAATCTCGCTGCATAATAACTGATGGCAAATGCAGCATTGCCTGAAGCGCTACGCTTATCAGGCCTACGCGGATCATCGATGTAGGTc                                                     <  1:2196804/100‑1 (MQ=255)
                                                 ttCGTAGCGAAAAATCTCGCTGCATAATAACTGATGGCAAATGCAGCATTGCCTGAAGCGCTACGCTTATCAGGCCTACGCGGATCATCGATGTAGGTc                                                     >  2:1432201/1‑99 (MQ=255)
                                                 ttCGTAGCGAAAAATCTCGCTGCATAATAACTGATGGCAAATGCAGCATTGCCTGAAGCGCTACGCTTATCAGGCCTACGCGGATCATCGATGTAGGTCg                                                    <  1:1908455/100‑1 (MQ=255)
                                                   cGTAGCGAAAAATCTCGCTGCATAATAACTGATGGCAAATGCAGCATTGCCTGAAGCGCTACGCTTATCAGGCCTACGCGGATCATCGATGTAGGTCGGa                                                  <  2:1825204/100‑1 (MQ=255)
                                                    gTAGCGAAAAATCTCGCTGCATAATAACTGATGGCAAATGCAGCATTGCCTGAAGCGCTACGCTTATCAGGCCTACGCGGATCATCGATGTAGGTCGGAt                                                 <  1:1650324/100‑1 (MQ=255)
                                                    gTAGCGAAAAATCTCGCTGCATAATAACTGATGGCAAATGCAGCATTGCCTGAAGCGCTACGCTTATCAGGCCTACGCGGATCATCGATGTAGGTCGGAt                                                 <  2:693328/100‑1 (MQ=255)
                                                       gCGAAAAATCTCGCTGCATAATAACTGATGGCAAATGCAGCATTGCCTGAAGCGCTACGCTTATCAGGCCTACGCGGATCATCGATGTAGGTCGGATaa                                               >  2:868429/1‑99 (MQ=255)
                                                       gCGAAAAATCTCGCTGCATAATAACTGATGGCAAATGCAGCATTGCCTGAAGCGCTACGCTTATCAGGCCTACGCGGATCATCGATGTAGGTCGGATAAg                                              <  1:159366/100‑1 (MQ=255)
                                                        cGAAAAATCTCGCTGCATAATAACTGATGGCAAATGCAGCATTGCCTGAAGCGCTACGCTTATCAGGCCTACGCGGATCATCGATGTAGGTCGGATAAgg                                             <  1:772360/100‑1 (MQ=255)
                                                        cGAAAAATCTCGCTGCATAATAACTGATGGCAAATGCAGCATTGCCTGAAGCGCTACGCTTATCAGGCCTACGCGGATCATCGATGTAGGTCGGATAAg                                              >  2:1139600/1‑99 (MQ=255)
                                                         gagaaaTCTCGCTGCATAATAACTGATGGCAAATGCAGCATTGCCTGAAGCGCTACGCTTATCAGGCCTACGCGGATCAGCGATGTACGTCGGATCAGGc                                            >  2:2740133/4‑100 (MQ=37)
                                                          aaaaaTCTCGCTGCATAATAACTGATGGCAAATGCAGCATTGCCTGAAGCGCTACGCTTATCAGGCCTACGCGGATCATCGATGTAGGTCGGATAAGGCa                                           <  1:1329132/100‑1 (MQ=255)
                                                                ctcGCTGCATAATAACTGATGGCAAATGCAGCATTGCCTGAAGCGCTACGCTTATCAGGCCTACGCGGATCATCGATGTAGGTCGGATAAGGCACTcgcc                                     >  2:2432021/1‑100 (MQ=255)
                                                                  cGCTGCATAATAACTGATGGCAAATGCAGCATTGCCTGAAGCGCTACGCTTATCAGGCCTACGCGGATCATCGATGTAGGTCGGATAAGGCACTcgccgc                                   <  1:2527141/100‑1 (MQ=255)
                                                                    cTGCATAATAACTGATGGCAAATGCAGCATTGCCTGAAGCGCTACGCTTATCAGGCCTACGCGGATCATCGATGTAGGTCGGATAAGGCACTCGCCGCAt                                 <  2:1884400/100‑1 (MQ=255)
                                                                    cTGCATAATAACTGATGGCAAATGCAGCATTGCCTGAAGCGCTACGCTTATCAGGCCTACGCGGATCATCGATGTAGGTCGGATAAGGCACTCGCCGCAt                                 >  1:2612261/1‑100 (MQ=255)
                                                                        ataataACTGATGGCAAATGCAGCATTGCCTGAAGCGCTACGCTTATCAGGCCTACGCGGATCATCGATGTAGGTCGGATAAGGCACTCGCCGCATCCgg                             <  2:1889568/100‑1 (MQ=255)
                                                                         taataaCTGATGGCAAATGCAGCATTGCCTGAAGCGCTACGCTTATCAGGCCTACGCGGATCATCGATGTAGGTCGGATAAGGCACTCGCCGCATCCGGc                            <  2:1104268/100‑1 (MQ=255)
                                                                         taataaCTGATGGCAAATGCAGCATTGCCTGAAGCGCTACGCTTATCAGGCCTACGCGGATCATCGATGTAGGTCGGATAAGGCACTCGCCGCATCCGGc                            >  1:874077/1‑100 (MQ=255)
                                                                            taaCTGATGGCAAATGCAGCATTGCCTGAAGCGCTACGCTTATCAGGCCTACGCGGATCATCGATGTAGGTCGGATAAGGCACTCGCCGCATCCGGCAAg                         >  1:892729/1‑100 (MQ=255)
                                                                              aCTGATGGCAAATGCAGCATTGCCTGAAGCGCTACGCTTATCAGGCCTACGCGGATCATCGATGTAGGTCGGATAAGGCACTCGCCGCATCCGGCAAGAt                       <  1:1689814/100‑1 (MQ=255)
                                                                               cTGATGGCAAATGCAGCATTGCCTGAAGCGCTACGCTTATCAGGCCTACGCGGATCATCGATGTAGGTCGGATAAGGCACTCGCCGCATCCGGCAAGATa                      >  1:930877/1‑100 (MQ=255)
                                                                               cTGATGGCAAATGCAGCATTGCCTGAAGCGCTACGCTTATCAGGCCTACGCGGATCATCGATGTAGGTCGGATAAGGCACTCGCCGCATCCGGCAAGATa                      >  1:930791/1‑100 (MQ=255)
                                                                                  aTGGCAAATGCAGCATTGCCTGAAGCGCTACGCTTATCAGGCCTACGCGGATCATCGATGTAGGTCGGATAAGGCACTCGCCGCATCCGGCAAGATAAAt                   >  1:463695/1‑100 (MQ=255)
                                                                                   tGGCAAATGCAGCATTGCCTGAAGCGCTACGCTTATCAGGCCTACGCGGATCATCGATGTAGGTCGGATAAGGCACTCGCCGCATCCGGCAAGATAAATc                  <  1:2488000/100‑1 (MQ=255)
                                                                                    ggCAAATGCAGCATTGCCTGAAGCGCTACGCTTATCAGTCCTGCGCGGATCATCGATGTAGGTCGGATACGGCACTCGCCGCATCCGGCAAGCTAAATCg                 >  2:1698029/1‑100 (MQ=38)
                                                                                    ggCAAATGCAGCATTGCCTGAAGCGCTACGCTTATCAGGCCTACGCGGATCATCGATGTAGGTCGGATAAGGCACTCGCCGCATCCGGCAAGATAAATCg                 >  2:761129/1‑100 (MQ=255)
                                                                                    ggCAAATGCAGCATTGCCTGAAGCGCTACGCTTATCAGGCCTACGCGGATCATCGATGTAGGTCGGATAAGGCACTCGCCGCATCCGGCAAGATAAATCg                 >  1:508551/1‑100 (MQ=255)
                                                                                     gCAAATGCAGCATTGCCTGAAGCGCTACGCTTATCAGGCCTACGCGGATCATCGATGTAGGTCGGATAAGGCACTCGCCGCATCCGGCAAGATAAATCGc                >  2:22290/1‑100 (MQ=255)
                                                                                      cAAATGCAGCATTGCCTGAAGCGCTACGCTTATCAGGCCTACGCGGATCATCGATGTAGGTCGGATAAGGCACTCGCCGCATCCGGCAAGATAAATCGCa               <  2:1559810/100‑1 (MQ=255)
                                                                                       aaaTGCAGCATTGCCTGAAGCGCTACGCTTATCAGGCCTACGCGGATCATCGATGTAGGTCGGATAAGGCACTCGCCGCATCCGGCAAGATAAATCGCAc              <  2:2072903/100‑1 (MQ=255)
                                                                                       aaaTGCAGCATTGCCTGAAGCGCTACGCTTATCAGGCCTACGCGGATCATCGATGTAGGTCGGATAAGGCACTCGCCGCATCCGGCAAGATAAATCGCAc              >  1:767796/1‑100 (MQ=255)
                                                                                       aaaTGCAGCATTGCCTGAAGCGCTACGCTTATCAGGCCTACGCGGATCATCGATGTAGGTCGGATAAGGCACTCGCCGCATCCGGCAAGATAAATCGCAc              >  2:803404/1‑100 (MQ=255)
                                                                                         aTGCAGCATTGCCTGAAGCGCTACGCTTATCAGGCCTACGCGGATCATCGATGTAGGTCGGATAAGGCACTCGCCGCATCCGGCAAGATAAATCGCACGt            >  2:2015023/1‑100 (MQ=255)
                                                                                           tccgatctGCCTGAAGCGCTACGCTTATCGGGCCTACGCGGATCATCGATGTAGGTCGGATAAGGCACTCGCCGCATCCGGCAAGATAAATCGCACGTTg          <  1:920879/93‑1 (MQ=255)
                                                                                              gcaTTGCCTGAAGCGCTACCCTTATCAGCCCTACGCGGATCATCGATGTAGGTCGGATAAGGCACTCGCCGCATCCGGCAAGATAAATCGCACg             <  2:1065640/94‑1 (MQ=255)
                                                                                                 ttGCCTGAAGCGCTACGCTTATCAGGCCTACGCGGATCATCGATGTAGGTCGGATAAGGCACTCGCCGCATCCGGCAAGATAAATCGCACGTTGTCAGc     <  2:1080846/99‑1 (MQ=255)
                                                                                                  tGCCTGAAGCGCTACGCTTATCAGGCCTACGCGGATCATCGATGTAGGTCGGATAAGGCAGTCGCCGCATCCGGAAAGATAAATCGCACGTTGTCAGCaa   >  1:2411682/1‑100 (MQ=255)
                                                                                                  tGCCTGAAGCGCTACGCTTATCAGGCCTACGCGGATCATCGATGTAGGTCGGATAAGGCACTCGCCGCATCCGGCAAGATAAATCGCACGTTGTCAGCa    <  2:872500/99‑1 (MQ=255)
                                                                                                   GCCTGAAGCGCTACGCTTATCAGGCCTACGCGGATCATCGATGTAGGTCGGATAAGGCACTCGCCGCATCCGGCAAGATAAATcgcacgttgagatcgga  <  2:920875‑M1/100‑9 (MQ=255)
                                                                                                   GCCTGAAGCGCTACGCTTATCAGGCCTACGCGGATCATCGATGTAGGTCGGATAAGGCACTCGCCGCATCCGGCAAGATAAATCGCACGTTGTCAGCAAc  <  2:1486795‑M1/100‑1 (MQ=255)
                                                                                                   |                                                                                                   
TGCACGTCCTGGCTATCTGGAGCACTTCTGGGCGCTGGTGAACTGGGAATTCGTAGCGAAAAATCTCGCTGCATAATAACTGATGGCAAATGCAGCATTGCCTGAAGCGCTACGCTTATCAGGCCTACGCGGATCATCGATGTAGGTCGGATAAGGCACTCGCCGCATCCGGCAAGATAAATCGCACGTTGTCAGCAAC  >  NC_000913/1735884‑1736082

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.