New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 1929976NA (NA)5 (0.050) 3/166 NT NA noncoding (54/84 nt) REP135 (repetitive extragenic palindromic) element; contains 2 REP sequences REP135 (repetitive extragenic palindromic) element; contains 2 REP sequences
?NC_000913 = 1930006 NA (NA)noncoding (84/84 nt) REP135 (repetitive extragenic palindromic) element; contains 2 REP sequences REP135 (repetitive extragenic palindromic) element; contains 2 REP sequences

Only 100 of 110 total aligned reads displayed.

GGTGAAAGTAGTTTGTCGTTTTGAGTGGCATTGTTTGATGCTGATTGCCCGATGCGACGCTGTTGCGTCTTCTCAGGCCTACGATTGTGGTGCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGAATTATCAGAAGCCATTAACGCCGCTGATATTCCGCCATTCCCGCTTTGCAGTCCAC  >  NC_000913/1929877‑1930075
                                                                                                   |                                                                                                   
ggTGAAAGTAGTTTGTCGTTTTGAGTGGCATTGTTTGATGCTGATTGCCCGATGCGACGCTGTTGCGTCTTCTCAGGCCTACGATTGTGGTGCGTTCTgg                                                                                                     >  2:2551907/1‑100 (MQ=255)
ggTGAAAGTAGTTTGTCGTTTTGAGTGGCATTGTTTGATGCTGATTGCCCGATGCGACGCTGTTGCGTCTTCTCAGGCCTACGATTGTGGTGCGTTCTgg                                                                                                     <  1:865055/100‑1 (MQ=255)
ggTGAAAGTAGTTTGTCGTTTTGAGTGGCATTGTTTGATGCTGATTGCCCGATGCGACGCTGTTGCGTCTTCTCAGGCCTACGATTGTGGTGCGTTCTgg                                                                                                     >  1:2365039/1‑100 (MQ=255)
ggTGAAAGTAGTTTGTCGTTTTGAGTGGCATTGTTTGATGCTGATTGCCCGATGCGACGCTGTTGCGTCTTCTCAGGCCTACGATTGTGGTGCGTTCTgg                                                                                                     <  1:278222/100‑1 (MQ=255)
 gTGAAAGTAGTTTGTCGTTTTGAGTGGCATTGTTTGATGCTGATTGCCCGATGCGACGCTGTTGCGTCTTCTCAGGCCTACGATTGTGGTGCGTTCTGGg                                                                                                    >  1:690140‑M1/1‑99 (MQ=255)
 gTGAAAGGAGTTTGTCGTTTTGAGTGGCATTGTTTGATGCTGATTGCCCGATGCGACGCTGTTGCGTCTTCTCAGGCCTACGATTGTGGTGCGTTCTgg                                                                                                     <  2:1580121/99‑1 (MQ=255)
  tGAAAGTAGTTTGTCGTTTTGAGTGGCATTGTTTGATGCTGATTGCCCGATGCGACGCTGTTGCGTCTTCTCAGGCCTACGATTGTGGTGCGTTCTGGgg                                                                                                   >  1:1396389‑M1/1‑98 (MQ=255)
   gAAAGTAGTTTGTCGTTTTGAGTGGCATTGTTTGATGCTGATTGGCCGATGCGACGCTGTTGCGTCTTCTCAGGCCTACGATTGTGGTGCGTTCTGGggc                                                                                                  >  2:2519944‑M1/1‑97 (MQ=255)
   gAAAGTAGTTTGTCGTTTTGAGTGGCATTGTTTGATGCTGATTGCCCGATGCGACGCTGTTGCGTCTTCTCAGGCCTACGATTGTGGTGCGTTCTGGggc                                                                                                  <  1:470444‑M1/100‑4 (MQ=255)
   gAAAGTAGTTTGTCGTTTTGAGTGGCATTGTTTGATGCTGATTGCCCGATGCGACGCTGTTGCGTCTTCTCAGGCCTACGATTGTGGTGCGTTCTGGggc                                                                                                  <  2:1286073‑M1/100‑4 (MQ=255)
   gAAAGTAGTTTGTCGTTTTGAGTGGCATTGTTTGATGCTGATTGCCCGATGCGACGCTGTTGCGTCTTCTCAGGCCTACGATTGTGGTGCGTTCTGGggc                                                                                                  <  1:2614533‑M1/100‑4 (MQ=255)
   gAAAGTAGTTTGTCGTTTTGAGTGGCATTGTTTGATGCTGATTGCCCGATGCGACGCTGTTGCGTCTTCTCAGGCCTACGATTGTGGTGCGTTCTGGggc                                                                                                  >  2:2242776‑M1/1‑97 (MQ=255)
    aaaGTAGTTTGTCGTTTTGAGTGGCATTGTTTGATGCTGATTGCCCGATGCGCCGCTGTTGCGTCTTCTCAGGCCTACGATTGTGGTGCGTTCTGGggcg                                                                                                 <  1:1906906‑M1/100‑5 (MQ=255)
    aaaGTAGTTTGTCGTTTTGAGTGGCATTGTTTGATGCTGATTGCCCGATGCGACGCTGTTGCGTCTTCTCAGGCCTACGATTGTGGTGCGTTCTGGggcg                                                                                                 <  2:1748475‑M1/100‑5 (MQ=255)
     tagtagttTGTCGTTTTGAGTGGCATTGTTTGATGCTGATTGCCCGATGCGACGCTGTTGCGTCTTCTCAGGCCTACGATTGTGGTGCGTTCTGGggcgg                                                                                                <  2:157122‑M1/99‑6 (MQ=255)
     aaGTAGTTTGTCGTTTTGAGTGGCATTGTTTGATGCTGATTGCCCCATGCGACGCTGTTGCGTCTTCTCAGGCCTACGATTGTGGTGCGTTCTGGggcgg                                                                                                <  1:1730452‑M1/100‑6 (MQ=255)
      agtagtTTGTCGTTTTGAGTGGCATTGTTTGATGCTGATTGCCCGATGCGACGCTGTTGCGTCTTCTCAGGCCTACGATTGTGGTGCGTTCTGGggcgga                                                                                               >  1:157122‑M1/1‑94 (MQ=255)
      agtagtTTGTCGTTTTGAGTGGCATTGTTTGATGCTGATTGCCCGATGCGACGCTGTTGCGTCTTCTCAGGCCTACGATTGTGGTGCGTTCTGGggcgga                                                                                               <  1:671911‑M1/100‑7 (MQ=255)
          gtTTGTCGTTTTGAGTGGCATTGTTTGATGCTGATTGCCCGATGCGACGCTGTTGCGTCTTCTCAGGCCTACGATTGTGGTGCGTTCTGGGGCGGACAAg                                                                                           >  1:2487777/1‑100 (MQ=255)
          gtTTGTCGTTTTGAGTGGCATTGTTTGATGCTGATTGCCCGATGCGACGCTGTTGCGTCTTCTCAGGCCTACGATTGTGGTGCGTTCTGGGGCGGACAAg                                                                                           >  1:909575/1‑100 (MQ=255)
           tttGTCGTTTTGAGTGGCATTGTTTGATGCTGATTGCCCGATGCGACGCTGTTGCGTCTTCTCAGGCCTACGATTGTGGTGCGTTCTGGGGCGGACAAgg                                                                                          <  1:2066232/100‑1 (MQ=255)
              gTCGTTTTGAGTGGCATTGTTTGATGCTGATTGCCCGATGCGACGCTGTTGCGTCTTCTCAGGCCTACGATTGTGGTGCGTTCTGGGGCGGACAAGGCAc                                                                                       <  1:110099/100‑1 (MQ=255)
                cGTTTTGAGTGGCATTGTTTGATGCTGATTGCCCGATGCGACGCTGTTGCGTCTTCTCAGGCCTACGATTGTGGTGCGTTCTGGGGCGGACAAGGCACTc                                                                                     >  2:265108/1‑100 (MQ=255)
                 gTTTTGAGTGGCATTGTTTGATGCTGATTGCCCGATGCGACGCTGTTGCGTCTTCTCAGGCCTACGATTGTGGTGCGTTCTGGGGCGGACAAGGCACTcg                                                                                    >  1:2003108/1‑100 (MQ=255)
                  ttttGAGTGGCATTGTTTGATGCTGATTGCCCGATGCGACGCTGTTGCGTCTTCTCAGGCCTACGATTGTGGTGCGTTCTGGGGCGGACAAGGCACTcgc                                                                                   <  1:1511260/100‑1 (MQ=255)
                  ttttGAGTGGCATTGTTTGATGCTGATTGCCCGATGCGACGCTGTTGCGTCTTCTCAGGCCTACGATTGTGGTGCGTTCTGGGGCGGACAAGGCACTcgc                                                                                   <  1:777452/100‑1 (MQ=255)
                     tGAGTGGCATTGTTTGATGCTGATTGCCCGATGCGACGCTGTTGCGTCTTCTCAGGCCTACGATTGTGGTGCGTTCTGGGGCGGACAAGGCACTCGcgcc                                                                                <  1:1733154/100‑1 (MQ=255)
                      gAGTGGCATTGTTTGATGCTGATTGCCCGATGCGACGCTGTTGCGTCTTCTCAGGCCTACGATTGTGGTGCGTTCTTGGGCGGACAAGGCACTCGcgccg                                                                               <  2:862126/100‑1 (MQ=255)
                        gTGGCATTGTTTGATGCTGATTGCCCGATGCGACGCTGTTGCGTCTTCTCCGGCCTACGATTGTGGTGCGTTCTGGGGCGGACAAGGCACTCGCGCCGCa                                                                             >  1:1068611/1‑100 (MQ=255)
                        gTGGCATTGTTTGATGCTGATTGCCCGATGCGACGCTGTTGCGTCTTCTCAGGCCTACGATTGTGGTGCGTTCTGGGGCGGACAAGGCACTCGCGCCGCa                                                                             >  1:1701112/1‑100 (MQ=255)
                           gCATTGTTTGATGCTGATTGCCCGATGCGACGCTGTTGCGTCTTCTCAGGCCTACGATTGTGGTGCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCC                                                                          >  2:1335805‑M2/1‑100 (MQ=255)
                            cATTGTTTGATGCTGATTGCCCGATGCGACGCTGTTGCGTCTTCTCAGGCCTACGATTGTGGTGCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCG                                                                         <  1:1667451‑M2/100‑1 (MQ=255)
                                gTTTGATGCTGATTGCCCGATGCGACGCTGTTGCGTCTTCTCAGGCCTACGATTGTGGTGCGTTCTGGggcggatgcggcgcgagtgccttgtccgcccc                                                                     <  1:719703‑M1/100‑33 (MQ=255)
                                gTTTGATGCTGATTGCCCGATGCGACGCTGTTGCGTCTTCTCAGGCCTACGATTGTGGTGCGTTCTGGggcggatgcggcgcgagtgccttgtccgcccc                                                                     <  1:1716549‑M1/100‑33 (MQ=255)
                                gTTTGATGCTGATTGCCCGATGCGACGCTGTTGCGTCTTCTCAGGCCTACGATTGTGGTGCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCaa                                                                     >  1:693705/1‑100 (MQ=255)
                                gTTTGATGCTGATTGCCCGATGCGACGCTGTTGCGTCTTCTCAGGCCTACGATTGTGGTGCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCaa                                                                     >  1:198589/1‑100 (MQ=255)
                                gTTTGATGCTGATTGCCCGATGCGACGCTGTTGCGTCTTCTCAGGCCTACGATTGTCGTGCGTTCTGGggcggatgcggcgcgagtgccttgtccgccct                                                                     <  2:265301‑M1/100‑33 (MQ=255)
                                 tttGATGCTGATTGCCCGATGCGACGCTGTTGCGTCTTCTCAGGCCTACGATTGTGGTGCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAAc                                                                    <  1:1760615/100‑1 (MQ=255)
                                   tGATGCTGATTGCCCGATGCGACGCTGTTGCGTCTTCTCAGGCCTACGATTGTGGTGCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAg                                                                  <  2:92301/100‑1 (MQ=255)
                                   tGATGCTGATTGCCCGATGCGACGCTGTTGCGTCTTCTCAGGCCTACGATTGTGGTGCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAg                                                                  >  2:1708725/1‑100 (MQ=255)
                                   tGATGCTGATTGCCCGATGCGACGCTGTTGCGTCTTCTCAGGCCTACGATTGTGGTGCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAg                                                                  <  2:198589/100‑1 (MQ=255)
                                    gATGCTGATTGCCCGATGCGACGCTGTTGCGTCTTCTCAGGCCTACGATTGTGGTGCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGt                                                                 >  1:996531/1‑100 (MQ=255)
                                      tGCTGATTGCCCGATGCGACGCTGTTGCGTCTTCTCAGGCCTACGATTGTGGTGCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCa                                                               >  1:423207/1‑100 (MQ=255)
                                      tGCTGATTGCCCGATGCGACGCTGTGGCGTCTTCTCAGGCCTACGATTGTGGTGCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAg                                                                  <  2:828561/97‑1 (MQ=255)
                                         tGATTGCCCGATGCGACGCTGTTGCGTCTTCTCAGGCCTACGATTGTGGTGCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATc                                                            >  1:2597260/1‑100 (MQ=255)
                                            ttGCCCGATGCGACGCTGTTGCGTCTTCTCAGGCCTACGATTGTGGTGCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGaa                                                         >  2:1585902/1‑100 (MQ=255)
                                             tGCCCGATGCGACGCTGTTGCGTCTTCTCAGGCCTACGATTGTGGTGCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGAAt                                                        <  1:609059/100‑1 (MQ=255)
                                              gCCCGATGCGACGCTGTTGCGTCTTCTCAGGCCTACGATTGTGGTGCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGAAtt                                                       >  2:1009594/1‑100 (MQ=255)
                                              gCCCGATGCGACGCTGTTGCGTCTTCTCAGGCCTACGATTGTGGTGCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGAAtt                                                       >  1:1195556/1‑100 (MQ=255)
                                               cccGATGCGACGCTGTTGCGTCTTCTCAGGCCTACGATTGTGGTGCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGAATTa                                                      >  1:641449/1‑100 (MQ=255)
                                               cccGATGCGACGCTGTTGCGTCTTCTCAGGCCTACGATTGTGGTGCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGCCAATCGAATTa                                                      >  2:2323769/1‑100 (MQ=255)
                                                 cGATGCGACGCTGTTGCGTCTTCTCAGGCCTACGATTGTGGTGCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGAATTATc                                                    <  2:670420/100‑1 (MQ=255)
                                                 cGATGCGACGCTGTTGCGTCTTCTCAGGCCTACGATTGTGGTGCGTTCTGGGGCGGACAAGGCACTCACGCCGCATCCGCCAACAGTCAATCGAATTATc                                                    <  1:2608957/100‑1 (MQ=255)
                                                  gATGCGACGCTGTTGCGTCTTCTCAGGCCTACGATTGTGGTGCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGAATTATCa                                                   >  2:2365787/1‑100 (MQ=255)
                                                  gATGCGACGCTGTTGCGTCTTCTCAGGCCTACGATTGTGGTGCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGAATTATCa                                                   >  2:2234081/1‑100 (MQ=255)
                                                      cGACGCTGTTGCGTCTTCTCAGGCCTACGATTGTGGTGCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGAATTATCAGAAg                                               >  1:1962750/1‑100 (MQ=255)
                                                      cGACGCTGTTGCGTCTTCTCAGGCCTACGATTGTGGTGCGTTCTGGGGCCGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGAATTATCaca                                                 >  2:2671123/1‑96 (MQ=255)
                                                       gACGCTGTTGCGTCTTCTCAGGCCTACGATTGTGGTGCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGAATTATCAGAAGc                                              >  1:1037963/1‑100 (MQ=255)
                                                        aCGCTGTTGCGTCTTCTCAGGCCTACGATTGTGGTGCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGAATTATCAGAAGcc                                             >  2:746494/1‑100 (MQ=255)
                                                        aCGCTGTTGCGTCTTCTCAGGCCTACGATTGTGGTGCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGAATTATCAGAAGcc                                             <  1:2013264/100‑1 (MQ=255)
                                                         cGCTGTTGCGTCTTCTCAGGCCTACGATTGTGGTGCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGAATTATCAGAAGcc                                             >  2:792570/1‑99 (MQ=255)
                                                           caacagCGTCTTCTCAGGCCTACGATTGTGGTGCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGAATTATCAGAAGCCAtt                                          >  2:253007/6‑100 (MQ=255)
                                                           cTGTTGCGTCTTCTCAGGCCTACGATTGTGGTGCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGAATTATCAGAAGCCAtt                                          <  1:621310/100‑1 (MQ=255)
                                                              ttGCGTCTTCTCAGGCCTACGATTGTGGTGCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGAATTATCAGAAGCCATTAAc                                       <  1:2243441/100‑1 (MQ=255)
                                                                gCGTCTTCTCGGGCCTACGATTGTGGTGCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGAATTATCAGAAGCCATTaa                                        >  2:5593/1‑97 (MQ=255)
                                                                gCGTCTTCTCAGGCCTACGATTGTGGTGCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGAATTATCAGAAGCCATTAAcgc                                     >  1:1435834/1‑100 (MQ=255)
                                                                gCGTCTTCTCAGGACTACGATTGTGGTGCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGAATTATCAGAAGCCATTAAcgc                                     >  1:1868472/1‑100 (MQ=255)
                                                                 cGTCTTCTCAGGCCTACGATTGTGGTGCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGAATTATCAGAAGCCATTAAcgcc                                    >  2:1735783/1‑100 (MQ=255)
                                                                    cttctCAGGCCTACGATTGTGGTGCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGAATTATCAGAAGCCATTAACGCCGCt                                 >  2:934838/1‑100 (MQ=255)
                                                                    cttctCAGGCCTACGATTGTGGTGCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGAATTATCAGAAGCCATTAACGCCGCt                                 >  1:2347395/1‑100 (MQ=255)
                                                                       ctcAGGCCTACGATTGTGGTGCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGAATTATCAGAAGCCATTAACGCCGCTGat                              >  1:2020012/1‑100 (MQ=255)
                                                                               tACGATTGTGGTGCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGAATTATCAGAAGCCATTAACGCCGCTGATATTCCGcc                      <  1:1294968/100‑1 (MQ=255)
                                                                                      gtggtgCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGAATTATCAGAAGCCATTAACGCCGCTGATATTCCGCCATTCCCg               >  1:350408/1‑100 (MQ=255)
                                                                                        ggtgCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGAATTATCAGAAGCCATTAACGCCGCTGATATTCCGCCATTCCCGc              >  2:2503317/1‑99 (MQ=255)
                                                                                        ggtgCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGAATTATCAGAAGCCATTAACGCCGCTGATATTCCGCCATTCCCGCt             >  2:64635/1‑100 (MQ=255)
                                                                                        ggtgCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGAATTATCAGAAGCCATTAACGCCGCTGATATTCCGCCATTCCCGCt             >  2:2317860/1‑100 (MQ=255)
                                                                                         gtgCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGAATTATCAGAAGCCATTAACGCCGCTGATATTCCGCCATTCCCGCtt            >  1:2746389/1‑100 (MQ=255)
                                                                                           gCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGAATTATCAGAAGCCATTAACGCCGCTGATATTCCGCCATTCCCGCTTTg          <  1:2368957/100‑1 (MQ=255)
                                                                                           gCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGAATTATCAGAAGCCATTAACGCCGCTGATATTCCGCCATTCCCGCTTTg          <  1:1527852/100‑1 (MQ=255)
                                                                                            cGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGAATTATCAGAAGCCATTAACGCCGCTGATATTCCGCCATTCCCGCTTTGc         <  1:1004069/100‑1 (MQ=255)
                                                                                            cGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGAATTATCAGAAGCCATTAACGCCGCTGATATTCCGCCATTCCCGCTTTGc         <  1:1801513/100‑1 (MQ=255)
                                                                                            cGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGAATTATCAGAAGCCATTAACGCCGCTGATATTCCGCCATTCCCGCTTTGc         >  2:18490/1‑100 (MQ=255)
                                                                                              ttCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGAATTATCAGAAGCCATTAACGCCGCTGATATTCCGCCATTCCCGCTTTGCAg       <  1:230406/100‑1 (MQ=255)
                                                                                               tCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGAATTATCAGAAGCCATTAACGCCGCTGATATTCCGCCATTCCCGCTTTGCAg       <  2:2513150/99‑1 (MQ=255)
                                                                                               tCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGAATTATCAGAAGCCATTAACGCCGCTGATATTCCGCCATTCCCGCTTTGCAGt      <  1:937550/100‑1 (MQ=255)
                                                                                               tCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGAATTATCAGAAGCCATTAACGCCGCTGATATTCCGCCATTCCCGCTTTGCAGt      >  1:96603/1‑100 (MQ=255)
                                                                                                cTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCccagaacgcaccacaatcgtaggcctgagaagacgcaacagcgtcgcatcgggcaatcagcatcaa     <  1:1570101‑M2/100‑67 (MQ=255)
                                                                                                cTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGAATTATCAGAAGCCATTAACGCCGCTGCTATTCCGCCATTCCCGCTTTGCAGTc     >  1:2508381/1‑100 (MQ=255)
                                                                                                cTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGAATTATCAGAAGCCATTAACGCCGCTGATATTCCGCCATTCCCGCTTTGCAGTc     >  1:658925/1‑100 (MQ=255)
                                                                                                 tGGGGCGGACAAGGCACTCGCGCCGCATCCGCCccagaacgcaccacaatcgtaggcctgagaagacgcaacagcgtcgcatcgggcaatcagcatcaaa    <  1:1774962‑M2/100‑68 (MQ=255)
                                                                                                 tGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGAATTATGAGAAGCCATTAACGCCGCTGATATTCCGCCATTCCCGCTTTGCAGTcc    <  2:1559412/100‑1 (MQ=255)
                                                                                                 tGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGAATTATCAGAAGCCATTAACGCCGCTGATATTCCGCCATTCCCGCTTTGCAGTcc    >  2:321668/1‑100 (MQ=255)
                                                                                                  ggggCGGACAAGGCACTCGCGCCGCATCCGCCccagaacgcaccacaatcgtaggcctgagaagacgcaacagcgtcgcatcgggcaatcagcatcaaac   <  1:1716549‑M2/100‑69 (MQ=255)
                                                                                                  ggggCGGACAAGGCACTCGCGCCGCATCCGCCccagaacgcaccacaatcgtaggcctgagaagacgcaacagcgtcgcatcgggcaatcagcatcaaac   <  1:719703‑M2/100‑69 (MQ=255)
                                                                                                  ggggCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGAATTATCAGAAGCCATTAACGCCGCTGATATTCCGCCATTCCCGCTTTGCAGTCCa   <  1:614054/100‑1 (MQ=255)
                                                                                                  ggggCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGAATTATCAGAAGCCATTAACGCCGCTGATATTCCGCCATTCCCGCTTTGCAGTCCa   >  1:166906/1‑100 (MQ=255)
                                                                                                  ggggCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGAATTATCAGAAGCCATTAACGCCGCTGATATTCCGCCATTCCCGCTTTGCAGTCCa   >  2:1485340/1‑100 (MQ=255)
                                                                                                  agggcGGACAAGGCACTCGCGCCGCATCCGCCccagaacgcacgacaatcgtaggcctgagaagacgcaacagcgtcgcatcgggcaatcagcatcaaac   <  2:265301‑M2/99‑69 (MQ=255)
                                                                                                   gggCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGAATTATCAGAAGCCATTAACGCCGCTGATATTCCGCCATTCCCGCTTTGCAGTCCAc  >  2:2712660/1‑100 (MQ=255)
                                                                                                   gggCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGAATTATCAGAAGCCATTAACGCCGCTGATATTCCGCCATTCCCGCTTTGCAGTCCAc  <  2:2003096/100‑1 (MQ=255)
                                                                                                   |                                                                                                   
GGTGAAAGTAGTTTGTCGTTTTGAGTGGCATTGTTTGATGCTGATTGCCCGATGCGACGCTGTTGCGTCTTCTCAGGCCTACGATTGTGGTGCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGAATTATCAGAAGCCATTAACGCCGCTGATATTCCGCCATTCCCGCTTTGCAGTCCAC  >  NC_000913/1929877‑1930075

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.