New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 2252796 =NA (NA)12 (0.130) 7/164 NT NA noncoding (1/91 nt) RIP157 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site RIP157 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site
?NC_000913 2252829 = NA (NA)noncoding (34/91 nt) RIP157 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site RIP157 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site

Only 100 of 144 total aligned reads displayed.

TAGCCTGCGCGGCAATTTCGCGCGCCAGCGGCAGCTTAAACAACCCTACCCTGTCTGCCGATAACGCGCTTTCATTAGTGCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCAGGCAATTTCAGCAAGTAAATGTAGGCCTGATAAGCTTGCGCATCAGGCAATGACACT  >  NC_000913/2252697‑2252895
                                                                                                   |                                                                                                    
tAGCCTGCGCGGCAATTTCGCGCGCCAGCGGCAGCTTAAACAACCCTACCCTGTCTGCCGATAACGCGCTTTCATTAGTGCCAATGGTGTAACAATGTTg                                                                                                      <  2:1291589/100‑1 (MQ=255)
tAGCCTGCGCGGCAATTTCGCGCGCCAGCGGCAGCTTAAACAACCCTACCCTGTCTGCCGATAACGCGCTTTCATTAGTGCCAATGGTGTAACAATGTTg                                                                                                      <  2:732246/100‑1 (MQ=255)
accattgccgggttctttattggtttagcttgagtgtcattgcctgatgcgcaagcttatcaggcctacatttacttgctgaaattgcctgatttgtagg                                                                                                      >  2:280883‑M1/100‑100 (MQ=255)
  gCCTGCGCGGCAATTTCGCGCGCCAGCGGCAGCTTAAACAACCCTACCCTGTCTGCCGATAACGCGCTTTCATTAGTGCCAATGGTGTAACAATGTTGcc                                                                                                    >  2:351677/1‑100 (MQ=255)
  cattgccgggttctttattggtttagcttgagtgtcattgcctgatgcgcaagcttatcaggcctacatttacttgctgaaattgcctgatttgtagGcc                                                                                                    >  1:1730598‑M1/98‑100 (MQ=255)
   ccTGCGCGGCAATTTCGCGCGCCAGCGGCAGCTTAAACAACCCTACCCTGTCTGCCGATAACGCGCTTTCATTAGTGCCAATGGTGTAACAATGTTGCCg                                                                                                   >  1:1130887/1‑100 (MQ=255)
   ccTGCGCGGCAATTTCGCGCGCCAGCGGCAGCTTAAACAACCCTACCCTGTCTGCCGATAACGCGCTTTCATTAGTGCCAATGGTGTAACAATGTTGCCg                                                                                                   <  1:687417/100‑1 (MQ=255)
   attgccgggttctttattggtttagcttgagtgtcattgcctgatgcgcaagcttatcagtcctacatttacttgctgaaattgcctgatttgtagGCCg                                                                                                   <  1:141857‑M1/4‑1 (MQ=255)
    cTGCGCGGCAATTTCGCGCGCCAGCGGCAGCTTAAACAACCCTACCCTGTCTGCCGATAACGCGCTTTCATTAGTGCCAATGGTGTAACAATGTTGCCg                                                                                                   <  2:1340171/99‑1 (MQ=255)
      gccgggttctttattggtttagcttgagtgtcattgcctgatgcgcaagcttatcaggcctacatttacttgctgaaattgcctgatttgtagGCCGGAt                                                                                                >  2:2357‑M1/94‑100 (MQ=255)
      gccgggttctttattggtttagcttgagtggcaatgcctgatgcgcaagcttatcaggcctacatttacttgctgaaattgcctgatttgtagGCCGGAt                                                                                                <  2:1804956‑M1/7‑1 (MQ=255)
       cgcgGCAATTTCGCGCGCCAGCGGCAGCTTAAACAACCCTACCCTGTCTGCCGATAACGCGCTTTCATTAGTGCCAATGGTGTAACAATGTTGCCGGAtn                                                                                               <  1:2090634/100‑2 (MQ=255)
        gcgGCAATTTCGCGCGCCAGCGGCAGCTTAAACAACCCTACCCTGTCTGCCGATAACGCGCTTTCATTAGTGCCAATGGTGTAACAATGTTGCCGGATGc                                                                                              <  2:2410053/100‑1 (MQ=255)
        gcgGCAATTTCGCGCGCCAGCGGCAGCTTAAACAACCCTACCCTGTCTGCCGATAACGCGCTTTCATTAGTGCCAATGGTGTAACAATGTTGCCGGATGc                                                                                              <  2:1203762/100‑1 (MQ=255)
         gggttctttattggtttagcttgagtgtcattgcctgatgcgcaagcttatcaggcctacatttacttgctgaaattgcctgatttgtagGCCGGAt                                                                                                >  2:2636789‑M1/91‑97 (MQ=255)
          ggCAATTTCGCGCGCCAGCGGCAGCTTAAACAACCCTACCCTGTCTGCCGATAACGCGCTTTCATTAGTGCCAATGGTGTAACAATGTTGCCGGATGCGa                                                                                            >  2:766469/1‑100 (MQ=255)
           gCAATTTCGCGCGCCAGCGGCAGCTTAAACAACCCTACCCTGTCTGCCGATAACGCGCTTTCATTAGTGCCAATGGTGTAACAATGTTGCCGGATGCGAc                                                                                           <  1:462352/100‑1 (MQ=255)
             aaTTTCGCGCGCCAGCGGCAGCTTAAACAACCCTACCCTGTCTGCCGATAACGCGCTTTCATTAGTGCCAATGGTGTAACAATGTTGCCGGATGCGACGc                                                                                         >  1:1091040/1‑100 (MQ=255)
              aTTTCGCGCGCCAGCGGCAGCTTAAACAACCCTACCCTGTCTGCCGATAACGCGCTTTCATTAGTGCCAATGGTGTAACAATGTTGCCGGATGCGACGCt                                                                                       <  1:411556/100‑1 (MQ=255)
                ttCGCGCGCCAGCGGCAGCTTAAACAACCCTACCCTGTCTGCCGATAACGCGCTTTCATTAGTGCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTa                                                                                     <  1:766472/100‑1 (MQ=255)
                ttCGCGCGCCAGCGGCAGCTTAAACAACCCTACCCTGTCTGCCGATAACGCGCTTTCATTAGTGCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTa                                                                                     <  2:892666/100‑1 (MQ=255)
                  cgcgcgCCAGCGGCAGCTTAAACAACCCTACCCTGTCTGCCGATAACGCGCTTTCATTAGTGCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAAc                                                                                   <  2:1265809/100‑1 (MQ=255)
                   gcgcgcCAGCGGCAGCTTAAACAACCCTACCCTGTCTGCCGATAACGCGCTTTCATTAGTGCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTaa                                                                                    >  1:2688570/1‑98 (MQ=255)
                    cgcgcCAGCGGCAGCTTAAACAACCCTACCCTGTCTGCCGATAACGCGATTTCATTAGTGCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAAcgc                                                                                 >  1:1637765/1‑100 (MQ=255)
                      cgcCAGCGGCAGCTTAAACAACCCTACCCTGTCTGCCGATAACGCGCTTTCATTAGTGCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGt                                                                               >  2:2105876/1‑100 (MQ=255)
                       gcCAGCGGCAGCTTAAACAACCCTCCCCTGTGTGCCGATCACGCGATTTCATTAGTGCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTc                                                                              <  2:450794/100‑1 (MQ=255)
                       gcCAGCGGCAGCTTAAACAACCCTACCCTGTCTGCCGATAACGCGCTTTCATTAGTGCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTc                                                                              <  1:848384/100‑1 (MQ=255)
                       gcCAGCGGCAGCTTAAACAACCCTACCCTGTCTGCCGATAACGCGCTTTCATTAGTGCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTc                                                                              <  1:1544093/100‑1 (MQ=255)
                        ccAGCGGCAGCTTAAACAACCCTACCCTGTCTGCCGATAACGCGCTTTCATTAGTGCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTCt                                                                             <  2:390295/100‑1 (MQ=255)
                        ccAGCGGCAGCTTAAACAACCCTACCCTGTCTGCCGATAACGCGCTTTCATTAGTGCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTCt                                                                             <  2:816605/100‑1 (MQ=255)
                        ccAGCGGCAGCTTAAACAACCCTACCCTGTCTGCCGATAACGCGCTTTCATTAGTGCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTCt                                                                             >  2:1587951/1‑100 (MQ=255)
                        ccAGCGGCAGCTTAAACAACCCTACCCTGTCTGCCGATAACGCGCTTTCATTAGTGCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTCt                                                                             <  1:2061136/100‑1 (MQ=255)
                             ttgggtgtcattgcctgatgcgcaggcttatctggccttcattttcctgctgaaattgcctgatttgtagGCCGGATGCGACGCTTAACGCGTCTTATcc                                                                        >  2:854558‑M1/71‑100 (MQ=255)
                             ttgagtgtcattgcctgatgcgcaagcttatcaggcctacttttacttgctgaaattgcctgatttgtagGCCGGATGCGACGCTTAACGCGTCTTATcc                                                                        >  2:1673468‑M1/71‑100 (MQ=255)
                             ttgagtgtcattgcctgatgcgcaagcttatcaggcctacatttacttgctgaaattgcctgatttgtagGCCGGATGCGACGCTTAACGCGTCTTATcc                                                                        >  2:1270375‑M1/71‑100 (MQ=255)
                              gCAGCTTAAACAACCCTACCCTGTCTGCCGATAACGCGCTTTCATTAGTGCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCg                                                                       >  2:65768/1‑100 (MQ=255)
                               cAGCTTAAACAACCCTACCCTGTCTGCCGATAACGCGCTTTCATTAGTGCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCg                                                                       >  2:813264/1‑99 (MQ=255)
                                agtgtcattgcctgatgcgcaagcttatcaggcctacatttacttgctgaaattgcctgttttgtagGCCGGATGCGTCGCTTAACGCGTCTTATccgtc                                                                     >  2:1466505‑M1/68‑98 (MQ=255)
                                agtgtcattgcctgatgcgcaagcttatcaggcctacatttacttgctgaaattgcctgatttgtagGCCGGATGCGACGCTTAACGCGTCTTATCCGGc                                                                     >  1:2577879‑M1/68‑100 (MQ=255)
                                agtgtcattgcctgatgcgcaagcttatcaggcctacatttacttgctgaaattgcctgatttgtagGCCGGATGCGACGCTTAACGCGTCTTATCCGGc                                                                     >  1:150877‑M1/68‑100 (MQ=255)
                                aGCTTAAACAACCCTACCCTGTCTGCCGATAACGCGCTTTCATTAGTGCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGc                                                                     <  2:543752/100‑1 (MQ=255)
                                aGCTTAAACAACCATACCCTGTCTGCCGATAACGCGCTTTCATTAGTGCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTa                                                                           <  2:539052/94‑1 (MQ=255)
                                 gtgtcattgcctgatgcgcaagcttatcaggcctacatttacttgctgaaattgcctgatttgtagGCCGGATGCGACGCTTAACGCGTCTTATCCGGcc                                                                    >  2:1741720‑M1/67‑100 (MQ=255)
                                 gCTTAAACAACCCTACCCTGTCTGCCGATAACGCGCTTTCATTAGTGCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGcc                                                                    >  1:110566/1‑100 (MQ=255)
                                 gCTTAAACAACCCTACCCTGTCTGCCGATAACGCGCTTTCATTAGTGCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGcc                                                                    <  1:1712981/100‑1 (MQ=255)
                                 gCTTAAACAACCCTACCCTGTCTGCCGATAACGCGCTTTCATTAGTGCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGcc                                                                    <  1:2218200/100‑1 (MQ=255)
                                 gCTTAAACAACCCTACCCTGTCTGCCGATAACGCGCTTTCATTAGTGCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGcc                                                                    <  1:273247/100‑1 (MQ=255)
                                  cTTAAACAACCCTACCCTGTCTGCCGATAACGCGCTTTCATTAGTGCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCt                                                                   >  1:2008007/1‑100 (MQ=255)
                                  cTTAAACAACCCTACCCTGTCTGCCGATAACGCGCTTTCATTAGTGCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCt                                                                   <  1:2099769/100‑1 (MQ=255)
                                   gtcattgcctgatgcgcaagcttatcaggcctacatttacttgctgaaattgcctgatttgtagGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTa                                                                  >  2:2560989‑M1/65‑100 (MQ=255)
                                    tAAACAACCCTACCCTGTCTGCCGATAACGCGCTTTCATTAGTGCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATTCGGCCTAc                                                                 >  1:804857/1‑100 (MQ=255)
                                     cattgcctgatgcgcaagcttatcaggcctacgtttacttgcggaaattgcctgatttgttgGCCGGATGCGACGCTTAACGCGTCTTATCCGGTCTAc                                                                 >  2:152014‑M1/63‑99 (MQ=255)
                                     aaaCAACCCTACCCTGTCTGCCGATAACGCGCTTTCATTAGTGCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACa                                                                >  2:936353/1‑100 (MQ=255)
                                     aaaCAACCCTACCCTGTCTGCCGATAACGCGCTTTCATTAGTGCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACa                                                                >  2:2059203/1‑100 (MQ=255)
                                        caacCCTACCCTGTCTGCCGATAACGCGCTTTCATTAGTGCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACAAAt                                                             >  2:659817/1‑100 (MQ=255)
                                        caacCCTACCCTGTCTGCCGATAACGCGCTTTCATTAGTGCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACAAAt                                                             >  2:1305854/1‑100 (MQ=255)
                                          accctaccctGTCTGCCGATAACGCGCTTTCATTAGTGCCAATGGTGTAACAATGTTGCCGGATAAGACGCGTTAAGCGTCGCATCCGGcaacattgtta                                                           <  2:298901/100‑11 (MQ=17)
                                           ccctaccctGTCTGCCGATAACGCGCTTTCATTAGTGCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCAg                                                          <  2:1865930/100‑1 (MQ=255)
                                            tgatgcgcaagcttatcaggcctacatttacttgctgaaattgcctgatttgtagGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCAgg                                                         >  1:2552203‑M1/56‑100 (MQ=255)
                                                 cctGTCTGCCGATAACGCGCTTTCATTAGTGCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCAGGCAAt                                                     >  1:246440/1‑99 (MQ=255)
                                                   tGTCTGCCGATAACGCGCTTTCATTAGTGCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCAGGCAATTTc                                                  <  1:2253771/100‑1 (MQ=255)
                                                    gTCTGCCGATAACGCGCTTTCATTATTGCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCAGGCAATTTCa                                                 >  2:1374981/1‑100 (MQ=255)
                                                    gTCTGCCGATAACGCGCTTTCATTAGTGCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCAGGCAATTTCa                                                 >  1:1533804/1‑100 (MQ=255)
                                                    gTCTGCCGATAACGCGCTTTCATTAGTGCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCAGGCAATTTCa                                                 <  2:2487233/100‑1 (MQ=255)
                                                    gTCTGCCGATAACGCGCTTTCATTAGTGCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCAGGCAATTTCa                                                 >  1:782266/1‑100 (MQ=255)
                                                     tCTGCCGATAACGCGCTTTCATTAGTGCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCAGGCAATTTCAg                                                <  1:207249/100‑1 (MQ=255)
                                                       tGCCGATAACGCGCTTTCATTAGTGCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCAGGCAATTTCAGCa                                              >  1:2695620/1‑100 (MQ=255)
                                                       tGCCGATAACGCGCTTTCATTAGTGCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCAGGCAATTTCAGCa                                              >  1:2058031/1‑100 (MQ=255)
                                                         ccGATAACGCGCTTTCATTAGTGCCAATGGTGTAACAATGTTGCCGGATGCGACACTTAACGCGTCTTATCCGGCCTACAAATCAGGCAATTTCAGCAAg                                            <  1:2086343/100‑1 (MQ=255)
                                                              aatgcgcTTTCATTAGTGCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCAGGCAATTTCAGCAAGTAAAt                                       <  2:1417465/97‑1 (MQ=255)
                                                               tgttcgccgtaTTAGTGCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCAGGCAATTTCAGCAAGTAAATg                                      <  1:113407/90‑1 (MQ=255)
                                                                 gcgcTTTCATTAGTGCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCAGGCAATTTCAGCAAGTAAATGt                                     <  2:2598896/99‑1 (MQ=255)
                                                                    cTTTCATTAGTGCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCAGGCAATTTCAGCAAGTAAATGTAGGc                                 <  2:389738/100‑1 (MQ=255)
                                                                     tttCATTAGTGCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCAGGCAATTTCAGCAAGTAAATGTAGGcc                                <  1:1265433/100‑1 (MQ=255)
                                                                     tttCATTAGTGCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCAGGCAATTTCAGCAAGTAAATGTAGGcc                                <  1:1110203/100‑1 (MQ=255)
                                                                      ttCATTAGTGCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCAGGCAATTTCAGCAAGTAAATGTAGGCCt                               <  1:736529/100‑1 (MQ=255)
                                                                       tCATTAGTGCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCAGGCAATTTCAGCAAGTAAATGTAGGCCTg                              <  2:2688552/100‑1 (MQ=255)
                                                                         aTTAGTGCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCAGGCAATTTCAGCAAGTAAATGTAGGCCTGAt                            <  2:781260/100‑1 (MQ=255)
                                                                         aTTAGTGCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCAGGCAATTTCAGCAAGTAAATGTAGGCCTGAt                            >  2:2250096/1‑100 (MQ=255)
                                                                          ttAGTGCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCAGGCAATTTCAGCAAGTAAATGTAGGCCTGATa                           <  1:299693/100‑1 (MQ=255)
                                                                            aGTGCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCAGGCAATTTCAGCAAGTAAATGTAGGCCTGATAAg                         >  1:706650/1‑100 (MQ=255)
                                                                            aGTGCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCAGGCAATTTCAGCAAGTAAATGTAGGCCTGATAAg                         <  2:1091036/100‑1 (MQ=255)
                                                                            aGTGCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTAACCGGCCTACAAATCAGGCAATTTCAGCAAGTAAATGTAGGCCTGATAAg                         <  2:843020/100‑1 (MQ=255)
                                                                             gTGCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCCACAAATCAGGCACTTTCAGCTAGTAAATGTAGGCCTGATAAGc                        >  2:1761270/1‑100 (MQ=255)
                                                                               gCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCAGGCAATTTCAGCAAGTAAATGTAGGCCTGATAAGCtt                      >  2:2106737/1‑100 (MQ=255)
                                                                               gCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCAGGCAATTTCAGCAAGTAAATGTAGGCCTGATAAGCtt                      >  2:2105777/1‑100 (MQ=255)
                                                                               gCCAATGGTGTAACAATGTTGCCGGATGCGACGCTCAACGCGTCTTATCCGGCCTACAAATCAGGCAATTTCAGCAAGTAAATGTAGGCCTGATAAg                         >  2:48628/1‑97 (MQ=255)
                                                                                  aaTGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCAGGCAATTTCAGCAAGTAAATGTAGGCCTGATAAGCTTgcg                   <  1:1994910/100‑1 (MQ=255)
                                                                                     ggTGTAACAATGTTGCCGGATGCGACACTTAACGCGTCTTATCCGGCCTACAAATCAGGCAATTTCAGCAAGTAAATGTAGGCCTGATAAGCTTGCGCa                 >  1:1669033/1‑99 (MQ=255)
                                                                                      gtgtAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCAGGCAATTTCAGCAAGTAAATGTAGGCCTGATAAGCTTGCGCATc               >  1:2160925/1‑100 (MQ=255)
                                                                                        gtAACAATGTTGCCGGATGCGACGTTTAACGCGTCTTATCCGGCCTACAAATCAGGCAATTTCAGCAAGTAAATGTAGGCCTGATAAGCTTGCGCATCAg             <  2:2700578/100‑1 (MQ=255)
                                                                                        gtAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCAGGCAATTTCAGCAAGTAAATGTAGGCCTGATAAGCTTGCGCATCAg             <  1:330558/100‑1 (MQ=255)
                                                                                        gtAACAAGTGTGCCGGATGCGACGCTTAAGGCGTCGTATCCGGCCTACAAATCAGGCAATTTCAGCAAGTAAATGTAGGCCTGATAAGCTTGCGCATCa              <  2:2183521/99‑1 (MQ=38)
                                                                                          aaCAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCAGGCAATTTCAGCAAGTAAATGTAGGCCTGATAAGCTTGCGCATCAGGc           >  2:2638636/1‑100 (MQ=255)
                                                                                           aCAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCAGGCAATTTCAGCAAGTAAATGTAGGCCTGATAAGCTTGCGCATCAGGCa          <  2:197445/100‑1 (MQ=255)
                                                                                           aCAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCAGGCAATTTCAGCAAGTAAATGTAGGCCTGATAAGCTTGCGCATCAGGCa          >  2:1057504/1‑100 (MQ=255)
                                                                                              aTGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCAGGCAATTTCAGCAAGTAAATGTAGGCCTGATAAGCTTGCGCATCAGGCAATg       <  2:1224193/100‑1 (MQ=255)
                                                                                                  tGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCAGGCAATTTCAGCAAGTAAATGTAGGCCTGATAAGCTTGCGCATCAGGCAATGacac   >  1:210156/1‑100 (MQ=255)
                                                                                                  tGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCAGGCAATTTCAGCAAGTAAATGTAGGCCTGATAAGCTTGCGCATCAGGCAATGacac   >  1:2489802/1‑100 (MQ=255)
                                                                                                   GCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCAGGCAATTTCAGCAAGTAAATGTAGGCCTGATAAGCTTGCGCATCAGGCAATGACACt  <  2:1950501‑M1/100‑1 (MQ=255)
                                                                                                   |                                                                                                    
TAGCCTGCGCGGCAATTTCGCGCGCCAGCGGCAGCTTAAACAACCCTACCCTGTCTGCCGATAACGCGCTTTCATTAGTGCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCAGGCAATTTCAGCAAGTAAATGTAGGCCTGATAAGCTTGCGCATCAGGCAATGACACT  >  NC_000913/2252697‑2252895

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.