New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 2252796 =NA (NA)12 (0.130) 7/164 NT NA noncoding (1/91 nt) RIP157 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site RIP157 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site
?NC_000913 2252829 = NA (NA)noncoding (34/91 nt) RIP157 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site RIP157 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site

Only 100 of 146 total aligned reads displayed.

GCTTAAACAACCCTACCCTGTCTGCCGATAACGCGCTTTCATTAGTGCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCAGGCAATTTCAGCAAGTAAATGTAGGCCTGATAAGCTTGCGCATCAGGCAATGACACTCAAGCTAAACCAATAAAGAACCCGGCAATGGTC  >  NC_000913/2252730‑2252928
                                                                                                   |                                                                                                   
gtgtcattgcctgatgcgcaagcttatcaggcctacatttacttgctgaaattgcctgatttgtagGCCGGATGCGACGCTTAACGCGTCTTATCCGGcc                                                                                                     >  2:1741720‑M1/67‑100 (MQ=255)
gCTTAAACAACCCTACCCTGTCTGCCGATAACGCGCTTTCATTAGTGCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGcc                                                                                                     >  1:110566/1‑100 (MQ=255)
gCTTAAACAACCCTACCCTGTCTGCCGATAACGCGCTTTCATTAGTGCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGcc                                                                                                     <  1:273247/100‑1 (MQ=255)
gCTTAAACAACCCTACCCTGTCTGCCGATAACGCGCTTTCATTAGTGCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGcc                                                                                                     <  1:1712981/100‑1 (MQ=255)
 tgtcattgcctgatgcgcaagcttatcaggcctacatttacttgctgaaattgcctgatttgtagGCCGGATGCGACGCTTAACGCGTCTTATCCGGcc                                                                                                     >  1:2249493‑M1/66‑99 (MQ=255)
 cTTAAACAACCCTACCCTGTCTGCCGATAACGCGCTTTCATTAGTGCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCt                                                                                                    >  1:2008007/1‑100 (MQ=255)
  gtcattgcctgatgcgcaagcttatcaggcctacatttacttgctgaaattgcctgatttgtagGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTa                                                                                                   >  2:2560989‑M1/65‑100 (MQ=255)
    cattgcctgatgcgcaagcttatcaggcctacgtttacttgcggaaattgcctgatttgttgGCCGGATGCGACGCTTAACGCGTCTTATCCGGTCTAc                                                                                                  >  2:152014‑M1/63‑99 (MQ=255)
    aaaCAACCCTACCCTGTCTGCCGATAACGCGCTTTCATTAGTGCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACa                                                                                                 >  2:936353/1‑100 (MQ=255)
    aaaCAACCCTACCCTGTCTGCCGATAACGCGCTTTCATTAGTGCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACa                                                                                                 >  1:2628259/1‑100 (MQ=255)
      acaacCCTACCCTGTCTGCCGATAACGCGCTTTCATTAGTGCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACaaa                                                                                               >  2:418065/1‑100 (MQ=255)
       caacCCTACCCTGTCTGCCGATAACGCGCTTTCATTAGTGCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACAAAt                                                                                              >  2:1305854/1‑100 (MQ=255)
       caacCCTACCCTGTCTGCCGATAACGCGCTTTCATTAGTGCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACAAAt                                                                                              >  2:659817/1‑100 (MQ=255)
       caacCCTACCCTGTCTGCCGATAACGCGCTTTCATTAGTGCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACAAAt                                                                                              <  2:613336/100‑1 (MQ=255)
         accctaccctGTCTGCCGATAACGCGCTTTCATTAGTGCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCa                                                                                            >  2:725850/1‑100 (MQ=255)
          ccctaccctGTCTGCCGATAACGCGCTTTCATTAGTGCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCAg                                                                                           <  2:1865930/100‑1 (MQ=255)
           tgatgcgcaagcttatcaggcctacatttacttgctgaaattgcctgatttgtagGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCAgg                                                                                          >  1:2552203‑M1/56‑100 (MQ=255)
                cctGTCTGCCGATAACGCGCTTTCATTAGTGCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCAGGCAAt                                                                                      >  1:246440/1‑99 (MQ=255)
                  tGTCTGCCGATAACGCGCTTTCATTAGTGCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCAGGCAATTTc                                                                                   <  1:2253771/100‑1 (MQ=255)
                   gTCTGCCGATAACGCGCTTTCATTATTGCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCAGGCAATTTCa                                                                                  >  2:1374981/1‑100 (MQ=255)
                   gTCTGCCGATAACGCGCTTTCATTAGTGCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCAGGCAATTTCa                                                                                  >  1:782266/1‑100 (MQ=255)
                    tCTGCCGATAACGCGCTTTCATTAGTGCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCAGGCAATTTCAg                                                                                 <  1:207249/100‑1 (MQ=255)
                     cTGCCGATAACGCGCTTTCATTAGTGCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCAGGCAATTTCAGc                                                                                <  2:2091531/100‑1 (MQ=255)
                      tGCCGATACCGCGCTTTCATTAGTGCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCAGGCAATTTCAGCa                                                                               <  1:2726805/100‑1 (MQ=255)
                      tGCCGATAACGCGCTTTCATTAGTGCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCAGGCAATTTCAGCa                                                                               <  2:804853/100‑1 (MQ=255)
                        ccGATAACGCGCTTTCATTAGTGCCAATGGTGTAACAATGTTGCCGGATGCGACACTTAACGCGTCTTATCCGGCCTACAAATCAGGCAATTTCAGCAAg                                                                             <  1:2086343/100‑1 (MQ=255)
                              tgttcgccgtaTTAGTGCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCAGGCAATTTCAGCAAGTAAATg                                                                       <  1:113407/90‑1 (MQ=255)
                               cgcgCTTTCATTAGTGCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCAGGCAATTTCAGCAAGTAAATGt                                                                      >  1:394177/1‑100 (MQ=255)
                                gcgcTTTCATTAGTGCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCAGGCAATTTCAGCAAGTAAATGt                                                                      <  2:2598896/99‑1 (MQ=255)
                                gcgcTTTCATTAGTGCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCAGGCAATTTCAGCAAGTAAATGTa                                                                     >  2:1373492/1‑100 (MQ=255)
                                gcgcTTTCATTAGTGCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATACGGCATACAAATCAGGCAATTTCAGCAAGTAAATGTa                                                                     <  2:1453725/100‑1 (MQ=255)
                                  gcTTTCATTAGTGCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCAGGCAATTTCAGCAAGTAAATGTAgg                                                                   <  2:2598485/100‑1 (MQ=255)
                                   cTTTCATTAGTGCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCAGGCAATTTCAGCAAGTAAATGTAGGc                                                                  <  2:389738/100‑1 (MQ=255)
                                    tttCATTAGTGCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCAGGCAATTTCAGCAAGTAAATGTAGGcc                                                                 <  1:1110203/100‑1 (MQ=255)
                                    tttCATTAGTGCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCAGGCAATTTCAGCAAGTAAATGTAGGcc                                                                 <  1:1265433/100‑1 (MQ=255)
                                     ttCATTAGTGCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCAGGCAATTTCAGCAAGTAAATGTAGGCCt                                                                >  1:2541501/1‑100 (MQ=255)
                                     ttCATTAGTGCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCAGGCAATTTCAGCAAGTAAATGTAGGCCt                                                                <  1:736529/100‑1 (MQ=255)
                                      tCATTAGTGCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCAGGCAATTTCAGCAAGTAAATGTAGGCCTg                                                               <  2:2688552/100‑1 (MQ=255)
                                        aTTAGTGCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCAGGCAATTTCAGCAAGTAAATGTAGGCCTGAt                                                             >  2:2250096/1‑100 (MQ=255)
                                        aTTAGTGCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCAGGCAATTTCAGCAAGTAAATGTAGGCCTGAt                                                             <  2:781260/100‑1 (MQ=255)
                                           aGTGCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCAGGCAATTTCAGCAAGTAAATGTAGGCCTGATAAg                                                          <  2:1092156/100‑1 (MQ=255)
                                           aGTGCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCAGGCAATTTCAGCAAGTAAATGTAGGCCTGATAAg                                                          <  2:1091036/100‑1 (MQ=255)
                                           aGTGCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCAGGCAATTTCAGCAAGTAAATGTAGGCCTGATAAg                                                          >  1:706650/1‑100 (MQ=255)
                                           aGTGCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTAACCGGCCTACAAATCAGGCAATTTCAGCAAGTAAATGTAGGCCTGATAAg                                                          <  2:843020/100‑1 (MQ=255)
                                            gTGCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCAGGCAATTTCAGCAAGTAAATGTAGGCCTGATAAGc                                                         >  2:235513/1‑100 (MQ=255)
                                            gTGCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCAGGCAATTTCAGCAAGTAAATGTAGGCCTGATAAGc                                                         >  2:2457701/1‑100 (MQ=255)
                                            gTGCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCCACAAATCAGGCACTTTCAGCTAGTAAATGTAGGCCTGATAAGc                                                         >  2:1761270/1‑100 (MQ=255)
                                              gCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCAGGCAATTTCAGCAAGTAAATGTAGGCCTGATAAGCtt                                                       >  2:48629/1‑100 (MQ=255)
                                              gCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCAGGCAATTTCAGCAAGTAAATGTAGGCCTGATAAGCtt                                                       >  2:2105777/1‑100 (MQ=255)
                                              gCCAATGGTGTAACAATGTTGCCGGATGCGACGCTCAACGCGTCTTATCCGGCCTACAAATCAGGCAATTTCAGCAAGTAAATGTAGGCCTGATAAg                                                          >  2:48628/1‑97 (MQ=255)
                                              gCCAATGGTGTAACAATGTTGCCGGATGCGACGCTCAACGCGTCTTATCCGGCCTACAAATCAGGCAATTTCAGCAAGTAAATGTAGGCCCGATAAGCtt                                                       >  1:870486/1‑100 (MQ=255)
                                                 aaTGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCAGGCAATTTCAGCAAGTAAATGTAGGCCTGATAAGCTTgcg                                                    <  1:1994910/100‑1 (MQ=255)
                                                    ggTGTAACAATGTTGCCGGATGCGACACTTAACGCGTCTTATCCGGCCTACAAATCAGGCAATTTCAGCAAGTAAATGTAGGCCTGATAAGCTTGCGCa                                                  >  1:1669033/1‑99 (MQ=255)
                                                     gtgtAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCAGGCAATTTCAGCAAGTAAATGTAGGCCTGATAAGCTTGCGCATc                                                <  2:128047/100‑1 (MQ=255)
                                                     gtgtAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCAGGCAATTTCAGCAAGTAAATGTAGGCCTGATAAGCTTGCGCATc                                                >  1:2160925/1‑100 (MQ=255)
                                                      tgtAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCAGGCAATTTCAGCAAGTAAATGTAGGCCTGATAAGCTTGCGCATCa                                               >  1:2122309/1‑100 (MQ=255)
                                                       gtAACAATGTTGCCGGATGCGACGTTTAACGCGTCTTATCCGGCCTACAAATCAGGCAATTTCAGCAAGTAAATGTAGGCCTGATAAGCTTGCGCATCAg                                              <  2:2700578/100‑1 (MQ=255)
                                                       gtAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCAGGCAATTTCAGCAAGTAAATGTAGGCCTGATAAGCTTGCGCATCAg                                              <  1:330558/100‑1 (MQ=255)
                                                       gtAACAAGTGTGCCGGATGCGACGCTTAAGGCGTCGTATCCGGCCTACAAATCAGGCAATTTCAGCAAGTAAATGTAGGCCTGATAAGCTTGCGCATCa                                               <  2:2183521/99‑1 (MQ=38)
                                                         aaCAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCAGGCAATTTCAGCAAGTAAATGTAGGCCTGATAAGCTTGCGCATCAGGc                                            >  2:2638636/1‑100 (MQ=255)
                                                          aCAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCAGGCAATTTCAGCAAGTAAATGTAGGCCTGATAAGCTTGCGCATCAGGCa                                           <  2:197445/100‑1 (MQ=255)
                                                             aTGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCAGGCAATTTCAGCAAGTAAATGTAGGCCTGATAAGCTTGCGCATCAGGCAATg                                        <  1:1605677/100‑1 (MQ=255)
                                                              tGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCAGGCAATTTCAGCAAGTAAATGTAGGCCTGATAAGCTTGCGCATCAGGCAATGa                                       >  2:328935/1‑100 (MQ=255)
                                                              gtagaccggataagacgcgttaagcgtcgcatccggcCAACAAATCAGGCAATTTCCGCAAGTAAACGTAGGCCTGATAAGCTTGCGCATCAGGCAATg                                        >  2:152014‑M2/38‑99 (MQ=255)
                                                                 tGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCAGGCAATTTCAGCAAGTAAATGTAGGCCTGATAAGCTTGCGCATCAGGCAATGacac                                    >  1:210156/1‑100 (MQ=255)
                                                                 ggccggataagacgcgttaagcgtcgcatccggcCTACAAATCAGGCAATTTCAGCAAGTAAATGTAGGCCTGATAAGCTTGCGCATCAGGCAATGaca                                     >  1:2249493‑M2/35‑99 (MQ=255)
                                                                  gccggataagacgcgttaagcgtcgcatccggcCTACAAATCAGGCAATTTCAGCAAGTAAATGTAGGCCTGATAAGCTTGCGCATCAGGCAATGACACt                                   >  1:150877‑M2/34‑100 (MQ=255)
                                                                  gccggataagacgcgttaagcgtcgcatccggcCTACAAATCAGGCAATTTCAGCAAGTAAATGTAGGCCTGATAAGCTTGCGCATCAGGCAATGACACt                                   >  1:2577879‑M2/34‑100 (MQ=255)
                                                                  gacggataagacgcgttaagcgacgcatccggcCTACAAAACAGGCAATTTCAGCAAGTAAATGTAGGCCTGATAAGCTTGCGCATCAGGCAATGACACt                                   >  2:1466505‑M2/34‑100 (MQ=255)
                                                                  GCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCAGGCAATTTCAGCAAGTAAATGTAGGCCTGATAAGCTTGCGCATCAGGCAATGACACt                                   >  1:1172384‑M1/1‑100 (MQ=255)
                                                                   CCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCAGGCAATTTCAGCAAGTAAATGTAGGCCTGATAAGCTTGCGCATCAGGCAATGACACTc                                  <  2:1644534‑M1/100‑1 (MQ=255)
                                                                    CGGATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCAGGCAATTTCAGCAAGTAAATGTAGGCCTGATAAGCTTGCGCATCAGGCAATGACACTCa                                 >  1:685833‑M1/1‑100 (MQ=255)
                                                                     ggataagacgcgttaagcgtcgcatccggcCTACAAATCAGGCAATTTCAGCAGGAAAATGAAGGCCAGATAAGCCTGCGCATCAGGCAATGACACCCaa                                >  2:854558‑M2/31‑100 (MQ=255)
                                                                     ggataagacgcgttaagcgtcgcatccggcCTACAAATCAGGCAATTTCAGCAAGTAAATGTAGGCCTGATAAGCTTGCGCATCAGGCAATGACACTCaa                                >  2:1270375‑M2/31‑100 (MQ=255)
                                                                     ggataagacgcgttaagcgtcgcatccggcCTACAAATCAGGCAATTTCAGCAAGTAAAAGTAGGCCTGATAAGCTTGCGCATCAGGCAATGACACTCaa                                >  2:1673468‑M2/31‑100 (MQ=255)
                                                                      GATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCAGGCAATTTCAGCAAGTAAATGTAGGCCTGATAAGCTTGCGCATCAGGCAATGACACTCAAg                               >  2:2364631‑M1/1‑100 (MQ=255)
                                                                       ATGCGACGCTTAACGCGTCTTATCCGGCCTACGAATCAGGCAATTTCAGCAAGTAAATGTAGGCCTGATAAGCTTGCGCATCAGGCAATGACACTCAagn                              >  2:610993‑M1/1‑99 (MQ=255)
                                                                       ATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCAGGCAATTTCAGCAAGTAAATGTAGGCCTGATAAGCTTGCGCATCAGGCAATGACACTCAAGc                              >  2:1941274‑M1/1‑100 (MQ=255)
                                                                       ATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCAGGCAATTTCAGCAAGTAAATGTAGGCCTGATAAGCTTGCGCATCAGGCAATGACACTCAAGc                              >  2:1789739‑M1/1‑100 (MQ=255)
                                                                       ATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCAGGCAATTTCAGCAAGTAAATGTAGGCCTGATAAGCTTGCGCATCAGGCAATGACACTCAAGc                              >  2:2489786‑M1/1‑100 (MQ=255)
                                                                       ATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCAGGCAATTTCAGCAAGTAAATGTAGGCCTGATAAGCTTGCGCATCAGGCAATGACACTCAAGc                              >  1:2105790‑M1/1‑100 (MQ=255)
                                                                       ATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCAGGCAATTTCAGCAAGTAAATGTAGGCCTGATAAGCTTGCGCATCAGGCAATGACACTCAAGc                              >  1:1532374‑M1/1‑100 (MQ=255)
                                                                            aCGCTTAACGCGTCTTATCCGGCCTACAAATCAGGCAATTTCAGCAAGTAAATGTAGGCCTGATAAGCTTGCGCATCAGGCAATGACACTCAAGCTAAAc                         <  1:2457717/100‑1 (MQ=255)
                                                                             cGCTTAACGCGTCTTATCCGGCCTACAAATCAGGCAATTTCAGCAAGTAAATGTTGGCCTGATAAGCTTGCGCATCAGGCAATGACACTCAAGCTAAAcc                        <  1:1587958/100‑1 (MQ=255)
                                                                              gCTTAACGCGTCTTATCCGGCCTACAAATCAGGCAATTTCAGCAAGTAAATGTAGGCCTGATAAGCTTGCGCATCAGGCAATGACACTCAAGCTAAACCa                       >  2:156693/1‑100 (MQ=255)
                                                                               cTTAACGCGTCTTATCCGGCCTACAAATCAGGCAATTTCAGCAAGTAAATGTAGGCCTGATAAGCTTGCGCATCAGGCAATGACACTCAAGCTAAACCaa                      >  1:834235/1‑100 (MQ=255)
                                                                                  aaCGCGTCTTATCCGGCCTACAAATCAGGCAATTTCAGCAAGTAAATGTAGGCCTGATAAGCTTGCGCATCAGGCAATGACACTCAAGCTAAACCAATaa                   >  1:628903/1‑100 (MQ=255)
                                                                                  aaCGCGTCTTATCCGGCCTACAAATCAGGCAATTTCAGCAAGTAAATGTAGGCCTGATAAGCTTGCGCATCAGGCAATGACACTCAAGCTAAACCAATaa                   >  1:1885853/1‑100 (MQ=255)
                                                                                  aaCGCGTCTTATCCGGCCTACAAATCAGGCAATTTCAGCAAGTAAATGTAGGCCTGATAAGCTTGCGCATCAGGCAATGACACTCAAGCTAAACCAATa                    <  1:1373498/99‑1 (MQ=255)
                                                                                   aCGCGTCTTATCCGGCCTACAAATCAGGCAATTTCAGCAAGTAAATGTAGGCCTGATAAGCTTGCGCATCAGGCAATGACACTCAAGCTAAACCAATaaa                  <  1:1380376/100‑1 (MQ=255)
                                                                                   aCGCGTCTTATCCGGCCTACAAATCAGGCAATTTCAGCAAGTAAATGTAGGCCTGATAAGCTTGCGCATCAGGCAATGACACTCAAGCTAAACCAATaaa                  <  1:328935/100‑1 (MQ=255)
                                                                                      cgTCTTATCCGGCCTACAAATCAGGCAATTTCAGCAAGTAAATGTAGGCCTGATAAGCTTGCGCATCAGGCAATGACACTCAAGCTAAACCAATAAAGaa               >  1:1767135/1‑100 (MQ=255)
                                                                                      cgTCTTATCCGGCCTACAAATCAGGCAATTTCAGCAAGTAAATGTAAGCCTGATACGCTTGCGCATCAGGCAATGACACTCAAGCTAAACCACTAAAGaa               >  2:213008/1‑100 (MQ=255)
                                                                                         cTTATCCGGCCTACAAATCAGGCAATTTCAGCAAGTAAATGTAGGCCTGATAAGCTTGCGCATCAGGCAATGACACTCAAGCTAAACCAATAAAGAAccc            >  1:388750/1‑100 (MQ=255)
                                                                                           tATCCGGCCTACAAATGAGGCAATTTCAGCAAGTAAATGTAGGCCTGATAAGCTTGCGCATCAGGCAATGACACTCAAGCTAAACCAATAAAGAACCCgg          >  2:885522/1‑100 (MQ=255)
                                                                                            atccggcCTACAAATCAGGCAATTTCAGCAAGTAAATGTAGGCCTGATAAGCTTGCGCATCAGGCATTGCCACTCAAGCTAAACCAATAAAGAACCCGGc         <  2:1804956‑M2/93‑1 (MQ=255)
                                                                                            atccggcCTACAAATCAGGCAATTTCAGCAAGTAAATGTAGGCCTGATAAGCTTGCGCATCAGGCAATGACACTCAAGCTAAACCAATAAAGAAccc            >  2:2636789‑M2/8‑97 (MQ=255)
                                                                                            atccggcCTACAAATCAGGCAATTTCAGCAAGTAAATGTAGGCCTGATAAGCTTGCGCATCAGGCAATGACACTCAAGCTAAACCAATAAAGAACCCGGc         <  2:1966082‑M2/93‑1 (MQ=255)
                                                                                                   cTACAAATCAGGCAATTTCAGCAAGTAAATGTAGGCCTGATAAGCTTGCGCATCAGGCAATGACACTCAAGCTAAACCAATAAAGAACCCGGCAATGGTc  >  2:2413505/1‑100 (MQ=255)
                                                                                                   cTACAAATCAGGCAATTTCAGCAAGTAAATGTAGGCCTGATAAGCTTGCGCATCAGGCAATGACACTCAAGCTAAACCAATAAAGAACCCGGCAATGGTc  >  1:1673989/1‑100 (MQ=255)
                                                                                                   |                                                                                                   
GCTTAAACAACCCTACCCTGTCTGCCGATAACGCGCTTTCATTAGTGCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCAGGCAATTTCAGCAAGTAAATGTAGGCCTGATAAGCTTGCGCATCAGGCAATGACACTCAAGCTAAACCAATAAAGAACCCGGCAATGGTC  >  NC_000913/2252730‑2252928

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.