New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 4285342NA (NA)6 (0.070) 6/164 NT NA noncoding (41/77 nt) REP320 (repetitive extragenic palindromic) element; contains 2 REP sequences REP320 (repetitive extragenic palindromic) element; contains 2 REP sequences
?NC_000913 = 4285374 NA (NA)noncoding (73/77 nt) REP320 (repetitive extragenic palindromic) element; contains 2 REP sequences REP320 (repetitive extragenic palindromic) element; contains 2 REP sequences

Only 100 of 161 total aligned reads displayed.

TTAACGCTCGGGTAACCCTTGCCGAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAAACCGTTACCGACTCGCATCGGGCAATTGTGGGTTACGATGGCATCGCGATAGCCTGCTTCTCTTCAAGCAGCTTCTCGACTACGCCAGGATCG  >  NC_000913/4285275‑4285473
                                                                                                   |                                                                                                   
ttAACGCTCGGGTAACCCTTGCCGAATGTAGGCCGAATAAGGCGTTTACGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGC                                                                                                     <  2:1912614‑M2/100‑1 (MQ=255)
 tAACGCTCGGGTAACCCTTGCCGAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGcc                                                                                                    >  2:2307553/1‑100 (MQ=255)
 tAACGCTCGGGTAACCCTTGCCGAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGcc                                                                                                    <  1:1406457/100‑1 (MQ=255)
    cGCTCGGGTAACCCTTGCCGAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTa                                                                                                  <  2:1413991/99‑1 (MQ=255)
    cGCTCGGGTAACCCTTGCCGAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTAc                                                                                                 >  2:1697107/1‑100 (MQ=255)
      cTCGGGTAACCCTTGCCGAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACaa                                                                                               <  1:2524877/100‑1 (MQ=255)
      cTCGGGTAACCCTTGCCGAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACa                                                                                                <  1:1923870/99‑1 (MQ=255)
        cGGGTAACCCTTGCCGAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAAAc                                                                                             >  1:581724/1‑100 (MQ=255)
         gggTAACCCTTGCCGAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAAAcc                                                                                            <  2:1772913/100‑1 (MQ=255)
          ggTAACCCTTGCCGAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATCAATGCCTGATGCGCCGCTGTCGCGTCTTATCAGGCCTACAAACCg                                                                                           >  2:314061/1‑100 (MQ=255)
          ggTAACCCTTGCCGAATGTAGGCAGGATAAGGCGTTTACGCCGCATCCGGCAAGCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAAACCg                                                                                           >  2:342728/1‑100 (MQ=255)
           gTAGCCCTTGCCGAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAAACCGt                                                                                          <  2:609318/100‑1 (MQ=255)
           gTAACCCTTGCCGAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAAACCGt                                                                                          >  1:2332545/1‑100 (MQ=255)
           gTAACCCTTGCCGAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAAACCGt                                                                                          <  2:609290/100‑1 (MQ=255)
            tAACCCTTGCCGAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAAACCGtt                                                                                         <  1:1850665/100‑1 (MQ=255)
             agcccTTGCCGAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAAACCGTTa                                                                                        <  2:653942/98‑1 (MQ=255)
               cccTTGCCGAATGTAGGCCGGATAAGGCGTTTACGTCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAAACCGTTAcc                                                                                      <  2:1264333/100‑1 (MQ=255)
               cccTTGCCGAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAAACCGTTAcc                                                                                      <  2:1514523/100‑1 (MQ=255)
               cccTTGCCGAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAAACCGTTAcc                                                                                      >  1:2572265/1‑100 (MQ=255)
                   tGCCGAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAAACCGTTACCGACt                                                                                  >  2:1831197/1‑100 (MQ=255)
                    gCCGAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAAACCGTTACCGACTc                                                                                 >  2:380609/1‑100 (MQ=255)
                    gCCGAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTACCAGGCCTACAAACCGTTACCGACTc                                                                                 >  1:2656616/1‑100 (MQ=255)
                     ccGAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAAACCGTTACCGACTCg                                                                                <  1:428972/100‑1 (MQ=255)
                        aaTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAAACCGTTACCGACTCGCAt                                                                             <  2:1770820/100‑1 (MQ=255)
                         aTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAAACCGTTACCGACTCGCATc                                                                            <  2:2491213/100‑1 (MQ=255)
                          tGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAAACCGTTACCGACTCGCATCg                                                                           <  1:1620016/100‑1 (MQ=255)
                           gTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAAACCGTTACCGACTCGCATCgg                                                                          <  1:1545618/100‑1 (MQ=255)
                            tAGGCCGGATAAGGCGTTTACGCCGCATCCGGTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAAACCGTTACCGACTCGCATCggg                                                                         >  2:1383612/1‑100 (MQ=255)
                            tAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAAACCGTTACCGACTCGCATCggg                                                                         <  2:2387837/100‑1 (MQ=255)
                            tAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAAACCGTTACCGACTCGCATCggg                                                                         <  2:444457/100‑1 (MQ=255)
                            tAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAAACCGTTACCGACTCGCATCggg                                                                         >  2:2608266/1‑100 (MQ=255)
                            tAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAAACCGTTACCGACTCGCATCggg                                                                         <  2:2270635/100‑1 (MQ=255)
                             aGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACCCGTTACCGACTCGCATCggg                                                                         >  2:1270724/1‑99 (MQ=255)
                             aGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATCAATGCCAGATGCGACGCTGTCGCGTCTTATCAGGCCTACAAACCTTTACCGACTCGCATCGGGc                                                                        <  2:239195/100‑1 (MQ=255)
                              ggCCGGATAAGGCGTTTACGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAAACCGTTACCGACTCGCATCGGGCa                                                                       >  1:1792074/1‑100 (MQ=255)
                              ggCCGGATAAGGCGTTTACGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAAACCGTTACCGACTCGCATCGGGCa                                                                       >  1:1755709/1‑100 (MQ=255)
                              ggCCGGATAAGGCGTTTACGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAAACCGTTACCGACTCGCATCGGGCa                                                                       <  1:1992567/100‑1 (MQ=255)
                              gaccGGATAAGGCTTTTACGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAAACCGTTACCGACTCGCATCGGGCa                                                                       >  1:1869860/3‑100 (MQ=255)
                               gCCGGATAAGGCGTTTACGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAAACCGTTACCGACTCGCATCGGGCaa                                                                      >  1:1220130/1‑100 (MQ=255)
                                ccGGATAAGGCGTTTACGCCGCATCCGGCAATCAATGCCTGATGCGATGCTGTCGCGTCTTATCAGGCCTACAAACCGTTACCGACTCGCATCGGGCAAt                                                                     <  1:942426/100‑1 (MQ=255)
                                ccGGATAAGGCGTTTACGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAAACCGTTACCGACTCGCATCGGGCAAt                                                                     >  2:2144046/1‑100 (MQ=255)
                                ccGGATAAGGCGTTTACGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAAACCGTTACCGACTCGCATCGGGCAAt                                                                     <  1:2042008/100‑1 (MQ=255)
                                      aaGGCGTTTACGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAAACCGTTACCGACTCGCATCGGGCAATTGTggg                                                               <  2:984918/100‑1 (MQ=255)
                                        ggCGTTTACGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAAACCGTTACCGACTCGCATCGGGCAATTGTGGGtt                                                             <  1:251204/100‑1 (MQ=255)
                                          cGTTTACGCCGCATCCGGCAATCACTGCCTGATGCGACGCTGTCGCGTCTTATCCGGCCTAAAAACCGTTACCGACTCGCATCGGGCAATTGTGGGTTAc                                                           <  2:810188/100‑1 (MQ=255)
                                          cGTTTACGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAAACCGTTACCGACTCGCATCGGGCAATTGTGGGTTAc                                                           <  1:1113713/100‑1 (MQ=255)
                                              tACGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAAACCGTTACCGACTCGCATCGGGCAATTGTGGGTTACGATg                                                       <  1:482587/100‑1 (MQ=255)
                                                cgccgcATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAAACCGTTACCGACTCGCATCGGGCAATTGTGGGTTACGATGGc                                                     >  1:1119618/1‑100 (MQ=255)
                                                cgccgcATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAAACCGTTACCGACTCGCATCGGGCAATTGTGGGTTACGATGGc                                                     >  1:2692443/1‑100 (MQ=255)
                                                   cgcATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAAACCGTTACCGACTCGCATCGGGCAATTGTGGGTTACGATGGCATc                                                  >  1:294636/1‑100 (MQ=255)
                                                     cATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAAACCGTTACCGACTCGCATCGGGCAATTGTGGGTTACGATGGCATcgc                                                <  1:2296557/100‑1 (MQ=255)
                                                     cATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAAACCGTTACCGACTCGCATCGGGCAATTGTGGGTTACGATGGCATcg                                                 <  2:2063762/99‑1 (MQ=255)
                                                      aTCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAAACCGTTACCGACTCGCATCGGGCAATTGTGGGTTACGATGGCATcgcg                                               <  1:919565/100‑1 (MQ=255)
                                                      aTCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAAACCGTTACCGACTCGCATCGGGCAATTGTGGGTTACGATGGCATcgcg                                               <  1:784255/100‑1 (MQ=255)
                                                      aTCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAAACCGTTACCGACTCGCATCGGGCAATTGTGGGTTACGATGGCATcgcg                                               >  2:1010587/1‑100 (MQ=255)
                                                        ccGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAAACCGTTACCGACTCGCATCGGGCAATTGTGGGTTACGATGGCATCGCGAt                                             >  1:1652221/1‑100 (MQ=255)
                                                        ccGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAAACCGTTACCGACTCGCATCGGGCAATTGTGGGTTACGATGGCATCGCGAt                                             >  2:633726/1‑100 (MQ=255)
                                                         cGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAAACCGTTACCGACTCGCATCGGGCAATTGTGGGTTACGATGGCATCGCGATa                                            >  2:1567145/1‑100 (MQ=255)
                                                         cGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAAACCGTTACCGACTCGCATCGGGCAATTGTGGGTTACGATGGCATCGCGATa                                            >  2:2119/1‑100 (MQ=255)
                                                          ggCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAAACCGTTACCGACTCGCATCGAGCAATTGTGGGTTACGATGGCATCGCGAt                                             >  2:168984/1‑98 (MQ=255)
                                                            caatcaatGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAAACCGTTACCGACTCGCATCGGGCAATTGTGGGTTACGATGGCATCGCGATAGcc                                         <  1:1186379/100‑1 (MQ=255)
                                                              atcaatGCCTGATGCGACGCTGTCGCGTCTTATCAGGCattgattgccggatgcggcgtaaacgccttatccggcctacattcggcaagggttacccgag                                       <  1:1398001‑M2/100‑63 (MQ=255)
                                                               tcaatGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAAACCGTTACCGACTCGCATCGGGCAATTGTGGGTTACGATGGCATCGCGATAGCCTGc                                      <  2:1612527/100‑1 (MQ=255)
                                                                caatGCCTGATGCGACGCTGTCGCGTCTTATCAGGCattgattgccggatgcggcgtaaacgccttatccggcctacattcggcaagggttacccgagcg                                     <  2:1122378‑M2/100‑65 (MQ=255)
                                                                caatGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAAACCGTTACCGACTCGCATCGGGCAATTGTGGGTTACGATGGCATCGCGATAGCCTGCt                                     >  2:1065923/1‑100 (MQ=255)
                                                                 aatGCCTGATGCGACGCTGTCGCGTCTTATCAGGCattgattgccggatgcggcgtaaacgccttatccggcctacattcggcaagggttacccgagcgt                                    <  2:2039426‑M2/100‑66 (MQ=255)
                                                                 aatGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAAACCGTTACCGACTCGCATCGGGCAGTTGTGGGTTACGATGGCATCGCGATAGCCTGCtt                                    >  2:411067/1‑100 (MQ=255)
                                                                 aatGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAAACCGTTACCGACTCGCATCGGGCAATTGTGGGTTACGATGGCATCGCGATAGCCTGCtt                                    >  2:2182140/1‑100 (MQ=255)
                                                                 aatGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAAACCGTTACCGACTCGCATCGGGCAATTGTGGGTTACGATGGCATCGCGATAGCCTGCtt                                    >  2:2182129/1‑100 (MQ=255)
                                                                 aatGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAAACCGTTACCGACTCGCATCGGGCAATTGTGGGTTACGATGGCATCGCGATAGCCTGCtt                                    >  1:1055200/1‑100 (MQ=255)
                                                                  atGCCTGATGCGACGCTGTCGCGTCTTATCAGGCattgattgccggatgcggcgtaaacgccttatccggcctacattcggcaagggttacccgagcgtt                                   <  1:2200556‑M2/100‑67 (MQ=255)
                                                                  atGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAAACCGTTACCGACTCGCATCGGGCAATTGTGGGTTACGATGGCATCGCGATAGCCTGCTtc                                   <  2:864003/100‑1 (MQ=255)
                                                                    gCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAAACCGTTACCGACTCGCATCGGGCAATTGTGGGTTACGATGGCATCGCGATAGCCTGCTtctc                                 <  1:2054574/100‑1 (MQ=255)
                                                                     ccTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAAACCGTTACCGACTCGCATCGGGCAATTGTGGGTTACGATGGCATCGCGATAGCCTGCTTctct                                >  2:173550/1‑100 (MQ=255)
                                                                      cTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAAACCGTTACCGACTCGCATCGGGCAATTGTGGGTTACGATGGCATCGCGATAGCCTGCTTCTCtt                               <  2:1899542/100‑1 (MQ=255)
                                                                      cTGATGCGACGCTGTCGC‑‑‑‑‑ATCAGGCattgattgccggatgcggcgtaaacgccttatccggcctacattcggcaagggttacccgagcgttaaccttctc                          <  2:766842‑M2/100‑76 (MQ=255)
                                                                         aTGCGACGCTGTCGCGTCTTATCAGGCCTACAAACCGTTACCGACTCGCATCGGGCAATTGTGGGTTACGATGGCATCGCGATAGCCTGCTTCTCTTc                              >  2:1816771/1‑98 (MQ=255)
                                                                           gCGACGCTGTCGCGTCTTATCAGGCCTACAAACCGTTACCGACTCGCATCGGGCAATTGTGGGTTACGATGGCATCGCGATAGCCTGCTTCTCTTCAagc                          <  1:1010591/100‑1 (MQ=255)
                                                                           gCGACGCTGTCGCGTCTTATCAGGCCTACAAACCGTTACCGACTCGCATCGGGCAATTGTGGGTTACGATGGCATCGCGATAGCCTGCTTCTCTTCAagc                          <  1:2256761/100‑1 (MQ=255)
                                                                           gCGACGCTGTCGCGTCTTATCAGGCCTACAAACCGTTACCGACTCGCATCGGGCAATTGTGGGTTACGATGGCATCGCGATAGCCTGCTTCTCTTCAagc                          <  1:790930/100‑1 (MQ=255)
                                                                             gACGCTGTCTCGTCTTATCGGGCCTACAAACCGTTACCGACGCGCATCGGGCAATTGTGGGGTGCGATGGCATCGCGATAGCCTGCTTCTCTTCa                             <  2:408692/95‑1 (MQ=38)
                                                                               cGCTGTCGCGTCTTATCAGGCCTACAAACCGTTACCGACTCACATCGGGCAATTGTGGGTTACGATGGCATCGCGATAGCCTGCTTCTCTTCAagcagc                       <  1:1127790/99‑1 (MQ=255)
                                                                                   gTCGCGTCTTATCAGGCCTACAAACCGTTACCGACTCGCATCGGGCAATTGTGGGTTACGATGGCATCGCGATAGCCTGCTTCTCTTCAAGCAGCTtctc                  >  1:582218/1‑100 (MQ=255)
                                                                                    tCGCGTCTTATCAGGCCTACAAACCGTTACCGACTCGCATCGGGCAATTGTGGGTTACGATGGCATCGCGATAGCCTGCTTCTCTTCAAGCAGCTTCTCg                 <  1:2422949/100‑1 (MQ=255)
                                                                                     cgcgTCTTATCAGGCCTACAAACCGTTACCGACTCGCATCGGGCAATTGTGGGTTACGATGGCATCGCGATAGCCTGCTTCTCTTCAAGCAGCTTCTCGa                >  1:815043/1‑100 (MQ=255)
                                                                                     cgcgTCTTATCAGGCCTACAAACCGTTACCGACTCGCATCGGGCAATTGTGGGTTACGATGGCATCGCGATAGCCTGCTTCTCTTCAAGCAGCTTCTCGa                >  2:394087/1‑100 (MQ=255)
                                                                                     cgcgTCTTATCAGGCCTACAAACCGTTACCGACTCGCATCGGGCAATTGTGGGTTACGATGGCATCGCGATAGCCTGCTTCTCTTCAAGCAGCTTCTCGa                >  1:2107169/1‑100 (MQ=255)
                                                                                       cgTCTTATCAGGCCTACAAACCGTTACCGACTCGCATCGGGCAATTGTGGGTTACGATGGCATCGCGATAGCCTGCTTCTCTTCAAGCAGCTTCTCGACt              <  1:701964/100‑1 (MQ=255)
                                                                                          cTTATCAGGCCTACAAACCGTTACCGACTCGCATCGGGCAATTGTGGGTTACGATGGCATCGCGATAGCCTGCTTCTCTTCAAGCAGCTTCTCGACTACg           >  2:1846781/1‑100 (MQ=255)
                                                                                            tATCAGGCCTACAAACCGTTACCGACTCGCATCGGGCAATTGTGGGTTACGATGGCATCGCGATAGCCTGCTTCTCTTCAAGCAGCTTCTCGACTACGcc         >  1:501967/1‑100 (MQ=255)
                                                                                             aTCAGGCattgattgccggatgcggcgtaaacgccttatccggcctacattcggcaagggttacccgagcgttaaccttctcccataagggagcgggaan        >  1:25818‑M2/1‑7 (MQ=255)
                                                                                             aTCAGGCCTACAAACCGTTACCGACTCGCATCGGGCAATTGTGGGTTACGATGGCATCGCGATAGCCTGCTTCTCTTCAAGCAGCTTCTCGACTACGCCa        >  2:1015743/1‑100 (MQ=255)
                                                                                              tCAGGCCTACAAACCGTTACCGACTCGCATCGGGCAATTGTGGGTTACGATGGCATCGCGATAGCCTGCTTCTCTTCAAGCAGCTTCTCGACTACGCCAg       <  1:1580780/100‑1 (MQ=255)
                                                                                               cAGGCCTACAAACCGTTACCGACTCGCATCGGGCAATTGTGGGTTACGATGGCATCGCGATAGCCTGCTTCTCTTCAAGCAGCTTCTCGACTACGCCAgg      >  2:2088133/1‑100 (MQ=255)
                                                                                               cAGGCCTACAAAACGTTACCGACTCGCATCGGGCAATTGTGGGTTACGATGGCATCGCGATAGCCTGCTTCTCTTCAAGCAGCTTCTCGACTACGCCAg       >  2:2448685/1‑99 (MQ=255)
                                                                                                aGGCattgattgccggatgcggcgtaaacgccttatccggcctacattcggcaaggattacccgagcgttaaccttctcccatcagggagcggg           <  2:2218546‑M2/94‑91 (MQ=255)
                                                                                                aGGCattgattgccggatgcggcgtaaacgccgtatccggcctacattcggcaaggggtacccgagcgttaaccttctcccataagggagcgggaattaa     >  2:2636112‑M2/1‑4 (MQ=255)
                                                                                                 ggCCTACAAACCGTTACCGACTCGCATCGGGCAATTGTGGGTTACGATGGCATCGCGATAGCCTGCTTCTCTTCAAGCAGCTTCTCGACTACGCCAggtt    >  2:1173195/1‑98 (MQ=255)
                                                                                                 ggCCTACAAACCGTTACCGACTCGCATCGGGCAATTGTGGGTTACGATGGCATCGCGATAGCCTGCTTCTCTTCAAGCAGCTTCTCGACTACGCCAGGAt    >  2:2121105/1‑100 (MQ=255)
                                                                                                   ccTACAAACCGTTACCGACTCGCATCGGGCAATTGTGGGTTACGATGGCATCGCGATAGCCTGCTTCTCTTCAAGCAGCTTCTCGACTACGCCAGGATCg  <  1:1567152/100‑1 (MQ=255)
                                                                                                   |                                                                                                   
TTAACGCTCGGGTAACCCTTGCCGAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAAACCGTTACCGACTCGCATCGGGCAATTGTGGGTTACGATGGCATCGCGATAGCCTGCTTCTCTTCAAGCAGCTTCTCGACTACGCCAGGATCG  >  NC_000913/4285275‑4285473

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.